BAC Information

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BAC

Clone NameB6Ng01-124O23
Chromosome14 (Build37)
Map Location 23,925,672 - 24,088,478
singlet/doubletdoublet
Overlap genenone
Upstream gene1700112E06Rik, EG435392, LOC665068
Downstream geneKcnma1, LOC620499, Dlg5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124O23.bB6Ng01-124O23.g
ACCDH927710DH927711
length1,038971
definitionDH927710|Mus musculus domesticus DNA, BAC clone: B6Ng01-124O23, 5' end.DH927711|Mus musculus domesticus DNA, BAC clone: B6Ng01-124O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,925,672 - 23,926,714)(24,087,511 - 24,088,478)
sequence
gaattccataactaaaaggagaatgctttcttttgtactttgcaacacag
gtcttttctgaatgtaaataaactcagccttcagaataaaattatcttaa
gtgggtggtagaaagatggcctagcgattaagagcattggctgaccttgc
agagaacctggctttgattctcaggacagacagggaagctcacaactatc
tgggactccagttcaaggagattcactgccttcttctggcctctgtggtc
accaggaatgctcacaaggcacagaaatacatgcaaacaaaagcacatac
acacagaaatacacatacaatcttcttttaaaataacattaattgataat
aattcaggtgaccagaataaatggaaaaagaaaaagcttctaagatattc
tggctggaatttgtctttctttactgttggaatcaattccccagtggggc
ttggggtttcacaaaggaacagacaagaaaattcagctaaaaatcattga
gtttctatcatgaaacttagtctcagatcagtaagtttatccccgaggct
caggttcccctcagtaagtagactcacacccatgcctcagtttcccctcc
cataaagcctagtattgcccactcacatggtaagcttcccccgtgtccat
attgcttttccttccccacttttctgattagagggagattccgattgaaa
ggggaaaaaaatgaaaggaaaagcagaaaattagcatttgctcagctgca
catttcagttattaatattgcaatttgaagtaatggaattcacagaacgc
aaaatgtttaatgtttgcctggtggggtgaactcagctgcatggtatacg
gctttgaatttcaaggtgaggttcattatgcagaatcagtatgggcaagc
taacaatgccataaacccttcactgggtgtcttccctggttttatgttgc
attactgtggttttgagttttatattgctgtataatatagaatgcatatt
tgtagctgtgcatcctgtaactggagaaatttgtttaa
gaattctgggatagagccaagcacaagaggacttgcaggggaaagatgtg
aagacagacgcctggtcactgggcagaggtgagcagggatgacttggcag
aaggtagataaatacaaatggattatttaaaaatattagctagtcaggga
accagcctagctatatggcctaggtatttgtaaatctattttgagtctga
gtcataataatggaagcttgggacccagggctaaaaccagcccaccatac
aacagcagtttccaatgtaatcactgtagaaagaggggctgaggccaata
tatggccctccctccttcttctccattagccctgccctgagtctatgtat
tgtaaaacccaggatgttcaagattggtgtcaacacctttgtgtctcatg
gggtatcccgggcctttgtgaattctgagttccttgcaatcaccagacat
gctctccaaccccactttcagagagaaagcaagcccccttcaaagctata
ccacctgcaaggtatctggtcctcactgtggaaaactttcctccctacca
gattgcaaattactcaacaggcaacatatgctcctggtgaataaatgggc
tacctcactctcatgtccctgcaaagcccaactcccacagaacctctgct
aggttttctgcttccaagtcctgtgcaggtgatcctgtctggcctgcagt
accgtccaactctgaaccataaagtacctctcacgatcaaaatgtatttt
attgtgtctattgtgtcgggagctatgcattcatctcatgtgttttgtgg
caaaggctttttccataacctcataaccaaaaagaaatgaactagaatgt
tcttatcttcctgtcttccttccaccatcacatgtttttaaaattattgc
tgaggaaccaagaaccttgtaaatgctagacaccaagtgtgtgtgcgcgt
gtgtgtatgtgtgtgtggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23925672_23926714
seq2: B6Ng01-124O23.b_34_1071

seq1  GAATTCCATAACTAAAAGGAGAATGCTTTCTTTTGTACTTTGCAACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAACTAAAAGGAGAATGCTTTCTTTTGTACTTTGCAACACAG  50

seq1  GTCTTTTCTGAATGTAAATAAACTCAGCCTTCAGAATAAAATTATCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTCTGAATGTAAATAAACTCAGCCTTCAGAATAAAATTATCTTAA  100

seq1  GTGGGTGGTAGAAAGATGGCCTAGCGATTAAGAGCATTGGCTGACCTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGTAGAAAGATGGCCTAGCGATTAAGAGCATTGGCTGACCTTGC  150

seq1  AGAGAACCTGGCTTTGATTCTCAGGACAGACAGGGAAGCTCACAACTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCTGGCTTTGATTCTCAGGACAGACAGGGAAGCTCACAACTATC  200

seq1  TGGGACTCCAGTTCAAGGAGATTCACTGCCTTCTTCTGGCCTCTGTGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCCAGTTCAAGGAGATTCACTGCCTTCTTCTGGCCTCTGTGGTC  250

seq1  ACCAGGAATGCTCACAAGGCACAGAAATACATGCAAACAAAAGCACATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAATGCTCACAAGGCACAGAAATACATGCAAACAAAAGCACATAC  300

seq1  ACACAGAAATACACATACAATCTTCTTTTAAAATAACATTAATTGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAATACACATACAATCTTCTTTTAAAATAACATTAATTGATAAT  350

seq1  AATTCAGGTGACCAGAATAAATGGAAAAAGAAAAAGCTTCTAAGATATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGTGACCAGAATAAATGGAAAAAGAAAAAGCTTCTAAGATATTC  400

seq1  TGGCTGGAATTTGTCTTTCTTTACTGTTGGAATCAATTCCCCAGTGGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGAATTTGTCTTTCTTTACTGTTGGAATCAATTCCCCAGTGGGGC  450

seq1  TTGGGGTTTCACAAAGGAACAGACAAGAAAATTCAGCTAAAAATCATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTTCACAAAGGAACAGACAAGAAAATTCAGCTAAAAATCATTGA  500

seq1  GTTTCTATCATGAAACTTAGTCTCAGATCAGTAAGTTTATCCCCGAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATCATGAAACTTAGTCTCAGATCAGTAAGTTTATCCCCGAGGCT  550

seq1  CAGGTTCCCCTCAGTAAGTAGACTCACACCCATGCCTCAGTTTCCCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCCCCTCAGTAAGTAGACTCACACCCATGCCTCAGTTTCCCCTCC  600

seq1  CATAAAGCCTAGTATTGCCCACTCACATGGTAAGCTTCCCCCGTGTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGCCTAGTATTGCCCACTCACATGGTAAGCTTCCCCCGTGTCCAT  650

seq1  ATTGCTTTTCCTTCCCCACTTTTCTGATTAGAGGGAGATTCCGATTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTTCCTTCCCCACTTTTCTGATTAGAGGGAGATTCCGATTGAAA  700

seq1  GGGGAAAAAAATGAAAGGAAAAGCAGAAAATTAGCATTTGCTCAGCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAAAATGAAAGGAAAAGCAGAAAATTAGCATTTGCTCAGCTGCA  750

seq1  CATTTCAGTTATTAATATTGCAATTTGAAGTAATGGAATTCACAGAACGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGTTATTAATATTGCAATTTGAAGTAATGGAATTCACAGAACGC  800

seq1  AAAAGGTTTAAGGTTTGCCTGGTGGGGTGAACTCAGCTGCATGGTATACG  850
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTAATGTTTGCCTGGTGGGGTGAACTCAGCTGCATGGTATACG  850

seq1  GC-TTGAATTTCAAGGTGAGGTTCATTATGCAGAATCAGTATGGGCAAGC  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAATTTCAAGGTGAGGTTCATTATGCAGAATCAGTATGGGCAAGC  900

seq1  TAACAATGCCATAAACCCTTCACTGGGTGTCTTCCTTGGTTTTAATGTTG  949
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  TAACAATGCCATAAACCCTTCACTGGGTGTCTTCCCTGGTTTT-ATGTTG  949

seq1  CATTACTGTGGGTTTTGGAGTTTTAATATGCTGTATAAATATAGAATGCA  999
      |||||||||||  ||| ||||||||   |||||||| |||||||||||||
seq2  CATTACTGTGG--TTTTGAGTTTTATATTGCTGTAT-AATATAGAATGCA  996

seq1  TATTTGTGAGCATGTGCATCATGAAACGGGAGAAATTTTTTTAA  1043
      ||||||| ||| |||||||| || ||| |||||||||| |||||
seq2  TATTTGT-AGC-TGTGCATCCTGTAACTGGAGAAATTTGTTTAA  1038

seq1: chr14_24087511_24088478
seq2: B6Ng01-124O23.g_66_1036 (reverse)

seq1  ACACACACACACACATACACACACGCGCACACACACTTGGTTGTCTAGCA  50
      |||| ||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACAC-CACACACACATACACACACGCGCACACACACTTGG-TGTCTAGCA  48

seq1  TTTACAAGGTTCTGGGTTCCTCAGCACT-ATTTTAAAAACATGTGATGGT  99
      ||||||||||||| |||||||||||| | |||||||||||||||||||||
seq2  TTTACAAGGTTCTTGGTTCCTCAGCAATAATTTTAAAAACATGTGATGGT  98

seq1  GGAAGGAAGACAGGAAGATAAGAACATTCTAGTTCA-TTCCTTTTGGTTA  148
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  GGAAGGAAGACAGGAAGATAAGAACATTCTAGTTCATTTCTTTTTGGTTA  148

seq1  TGAGGTTATGGAAAAAGCCTTTGCCACAAAACACATGAGATGAATGCATA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTATGGAAAAAGCCTTTGCCACAAAACACATGAGATGAATGCATA  198

seq1  GCTCCCGACCCAATAGACACAATAAAATACATTTTGATCGTGAGAGGTAC  248
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCGACACAATAGACACAATAAAATACATTTTGATCGTGAGAGGTAC  248

seq1  -TTATGGTTCAGAGTTGGACGGTACTGCAGGCCAGACAGGATCACCTGCA  297
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTTCAGAGTTGGACGGTACTGCAGGCCAGACAGGATCACCTGCA  298

seq1  CAGGACTTGGAAGCAG-AAACCTAGCAGAGGTTCTGTGGGAGTTGGGCTT  346
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGGACTTGGAAGCAGAAAACCTAGCAGAGGTTCTGTGGGAGTTGGGCTT  348

seq1  TGCAGGGACATGAGAGTGAGGTAG-CCATTTATTCACCAGGAGCATATGT  395
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCAGGGACATGAGAGTGAGGTAGCCCATTTATTCACCAGGAGCATATGT  398

seq1  TGCCTGTTGAGTAATTTGCAATCTGGTAGGGAGGAAAGTTTTCCACAGTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTGAGTAATTTGCAATCTGGTAGGGAGGAAAGTTTTCCACAGTG  448

seq1  AGGACCAGATACCTTGCAGGTGGTATAGCTTTGAAGGGGGCTTGCTTTCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAGATACCTTGCAGGTGGTATAGCTTTGAAGGGGGCTTGCTTTCT  498

seq1  CTCTGAAAGTGGGGTTGGAGAGCATGTCTGGTGATTGCAAGGAACTCAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAAGTGGGGTTGGAGAGCATGTCTGGTGATTGCAAGGAACTCAGA  548

seq1  ATTCACAAAGGCCCGGGATACCCCATGAGACACAAAGGTGTTGACACCAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAAAGGCCCGGGATACCCCATGAGACACAAAGGTGTTGACACCAA  598

seq1  TCTTGAACATCCTGGGTTTTACAATACATAGACTCAGGGCAGGGCTAATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAACATCCTGGGTTTTACAATACATAGACTCAGGGCAGGGCTAATG  648

seq1  GAGAAGAAGGAGGGAGGGCCATATATTGGCCTCAGCCCCTCTTTCTACAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAGGAGGGAGGGCCATATATTGGCCTCAGCCCCTCTTTCTACAG  698

seq1  TGATTACATTGGAAACTGCTGTTGTATGGTGGGCTGGTTTTAGCCCTGGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACATTGGAAACTGCTGTTGTATGGTGGGCTGGTTTTAGCCCTGGG  748

seq1  TCCCAAGCTTCCATTATTATGACTCAGACTCAAAATAGATTTACAAATAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGCTTCCATTATTATGACTCAGACTCAAAATAGATTTACAAATAC  798

seq1  CTAGGCCATATAGCTAGGCTGGTTCCCTGACTAGCTAATATTTTTAAATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCATATAGCTAGGCTGGTTCCCTGACTAGCTAATATTTTTAAATA  848

seq1  ATCCATTTGTATTTATCTACCTTCTGCCAAGTCATCCCTGCTCACCTCTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTGTATTTATCTACCTTCTGCCAAGTCATCCCTGCTCACCTCTG  898

seq1  CCCAGTGACCAGGCGTCTGTCTTCACATCTTTCCCCTGCAAGTCCTCTTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGACCAGGCGTCTGTCTTCACATCTTTCCCCTGCAAGTCCTCTTG  948

seq1  TGCTTGGCTCTATCCCAGAATTC  968
      |||||||||||||||||||||||
seq2  TGCTTGGCTCTATCCCAGAATTC  971