BAC Information

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BAC

Clone NameB6Ng01-125D22
Chromosome14 (Build37)
Map Location 113,864,694 - 113,865,563
singlet/doubletsinglet
Overlap genenone
Upstream geneEG223186, LOC100043509, Tpm3-rs7
Downstream geneLOC100043510, LOC382947, LOC668791, LOC100043821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125D22.bB6Ng01-125D22.g
ACCDH927935DH927936
length1,255867
definitionDH927935|Mus musculus domesticus DNA, BAC clone: B6Ng01-125D22, 5' end.DH927936|Mus musculus domesticus DNA, BAC clone: B6Ng01-125D22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcgcactaaa
atcagggactagacaaggctgtccactctcaccctacctattcaacattg
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaactgcttcaatgaagtagctggatataaaattatctcaaacaag
tcaatggactttctgtacacaaaggataaacaggctgagaaagaaattag
ggaaacaacaacttctcaataaaccagagacactgaaacttatagaggag
aaagtagggaaaatccttgaagatatgggtacaggggaaaaattcctgaa
tagaacagcaatggcgtgtgctgtaagatcgagaatcgataaatgggacc
tcataaaattgcaaagcttctgcaaggcaaaaggcaccgtcaataagaca
aaaggccaccaacagattgggaaaggatctttacctatcccaaatcagat
aggggactaatatccaatatatatataaagaactcaagaaggtggactcc
agaaaatcaaataaccccattaaaaatggggctcagagctgaacaaagaa
ttctcacctgaggaataccgaatggctgagaagcacctgaaaaaatgttc
aacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagattcc
acttcactccagtcagaatggctaagatcaaaaattcaggtgacagcaga
tgctggtgaggatgtggagaaagaggaacactcctccattgttggtggga
ttgcaagcttgtacaacactctagaaatcagtctggctgttctcaaaaat
tggacatagtactaccggaggatcccgcaatacctcctcctcggcatata
tctggagatgtcccaccggtagaagaccaatgcttccacttatgttcatt
agcagctttattattatagccagaagcctgatgactcaatgtgcccctca
gcgaggtattgatacgaaaatgtgtactcttatcaatgatactatctcgc
ttataaaaatttgacttatggatatcctagcgcaaatgtggagtgggatc
ctcgt
agctctttactggcgtccataggtacctgagcacactttcacaaaataac
agatgtgtgtgtatggctcacatgcacacacatacataaatacataatat
ttttaaaatacatgaatattaataagagatatattgcttacaaagatgga
atcgcaatgtgattgccattattataagtaataaattttaaggttcttta
aaggctccaacataaaaaaaaactcatagtgcttcgtttggttttgtttg
gttttgttttttggtttctttctattatttgtttattatttttcagctag
gggatacattttgataattgtagtagatacttactagaaaattgaaaatt
cacgaccataactgaaaaaaaaattgaccgatgaaccagattaaaaagca
attaaagtgataattacataatctgcttatgattatttcttccagtgtga
ccataggtagaaaggctcagtgcatacaactattacatttttcctacaaa
ttccttgtgattactaataaacttacaaaaatatgcatactccactaagg
tctttggcaaaagaatgatgtaaagttgataaaaaattttaagaatattg
agtaacaccaagttagtattcatgaaaacataattataaagtcattcagg
aaattgggcttttccatctttgtaaatgctttttcatataaaaatataag
gtatagccaggtgtggtggtgcatgcctttaatcccaggactcaggaggc
agaggcaggtctacaaagtgagtcccaggacagccaggctatacggagaa
accctgtcttgaaaacatatgatagatagatagatagatagatagataga
tagatagatagatagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113864694_113865563
seq2: B6Ng01-125D22.g_76_942 (reverse)

seq1  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC-AT  49

seq1  ATGTTTTTCAAGACAGGGTTTCTCCGTATAGCCCTGGCTGTCCTGGGACT  100
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATG-TTTTCAAGACAGGGTTTCTCCGTATAG-CCTGGCTGTCCTGGGACT  97

seq1  CACTTTGTAGACCTGCCTCTGCCTCCTGAGTCCTGGGATTAAAGGCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTAGACCTGCCTCTGCCTCCTGAGTCCTGGGATTAAAGGCATGC  147

seq1  ACCACCACACCTGGCTATACCTTATATTTTTATATGAAAAAGCATTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACACCTGGCTATACCTTATATTTTTATATGAAAAAGCATTTACA  197

seq1  AAGATGGAAAAGCCCAATTTCCTGAATGACTTTATAATTATGTTTTCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGAAAAGCCCAATTTCCTGAATGACTTTATAATTATGTTTTCATG  247

seq1  AATACTAACTTGGTGTTACTCAATATTCTTAAAATTTTTTATCAACTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAACTTGGTGTTACTCAATATTCTTAAAATTTTTTATCAACTTTA  297

seq1  CATCATTCTTTTGCCAAAGACCTTAGTGGAGTATGCATATTTTTGTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTCTTTTGCCAAAGACCTTAGTGGAGTATGCATATTTTTGTAAGT  347

seq1  TTATTAGTAATCACAAGGAATTTGTAGGAAAAATGTAATAGTTGTATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTAATCACAAGGAATTTGTAGGAAAAATGTAATAGTTGTATGCA  397

seq1  CTGAGCCTTTCTACCTATGGTCACACTGGAAGAAATAATCATAAGCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTTTCTACCTATGGTCACACTGGAAGAAATAATCATAAGCAGAT  447

seq1  TATGTAATTATCACTTTAATTGCTTTTTAATCTGGTTCATCGGTCAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATTATCACTTTAATTGCTTTTTAATCTGGTTCATCGGTCAATTT  497

seq1  TTTTTTCAGTTATGGTCGTGAATTTTCAATTTTCTAGTAAGTATCTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAGTTATGGTCGTGAATTTTCAATTTTCTAGTAAGTATCTACTA  547

seq1  CAATTATCAAAATGTATCCCCTAGCTGAAAAATAATAAACAAATAATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATCAAAATGTATCCCCTAGCTGAAAAATAATAAACAAATAATAGA  597

seq1  AAGAAACCAAAAAACAAAACCAAACAAAACCAAACGAAGCACTATGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACCAAAAAACAAAACCAAACAAAACCAAACGAAGCACTATGAGTT  647

seq1  TTTTTTTATGTTGGAGCCTTTAAAGAACCTTAAAATTTATTACTTATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATGTTGGAGCCTTTAAAGAACCTTAAAATTTATTACTTATAAT  697

seq1  AATGGCAATCACATTGCGATTCCATCTTTGTAAGCAATATATCTCTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAATCACATTGCGATTCCATCTTTGTAAGCAATATATCTCTTATT  747

seq1  AATATTCATGTATTTTAAAAATATTATGTATTTATGTATGTGTGTGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCATGTATTTTAAAAATATTATGTATTTATGTATGTGTGTGCATG  797

seq1  TGAGCCATACACACACATCTGTTATTTTGTGAAAGTGTGCTCAGGTACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATACACACACATCTGTTATTTTGTGAAAGTGTGCTCAGGTACCT  847

seq1  ATGGACGCCAGTAAAGAGCT  870
      ||||||||||||||||||||
seq2  ATGGACGCCAGTAAAGAGCT  867