BAC Information

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BAC

Clone NameB6Ng01-125L23
Chromosome14 (Build37)
Map Location 80,605,240 - 80,606,391
singlet/doubletsinglet
Overlap genenone
Upstream geneAU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125L23.bB6Ng01-125L23.g
ACCDH928295DH928296
length1,1431,145
definitionDH928295|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L23, 5' end.DH928296|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaggctgctactaggatctcttcccatccactgatcaggagt
cttctcatctcctgtgtaacaggccatgtccctgtgctgtgggtgacaac
catgctgtgtagttctccctttactaggcagaagttctaaatattttaac
tgtagtagtctgctgccacatgtgctggggaaaatttaatgtgagacaca
aactggcagatcatcagcaactgtgcccacatttggtagggcataatttg
cagtcttcccaaggtctaatttgcaggagatgtagcaattatatccatcc
ctgagttctctgtgcctttgcctctgtatctgtctttctctgtctctgcc
tctctttttctctctttgtctctctgtctctctccacctctgtctttctc
tgtctctatttctttctctctgcccctgtctctgtctgtctctgtctctc
tgtctctctttgtctctctctctgtctctctgactctctgtctctctgtc
tctctctgtctctgtctctctctctgtctctctctctctctctctctttg
tgtgtgtatgtgtgttgctgggggttgaacataggccttatacatgctaa
gcaaatactctatcacttagctacatctctgacccttggtttttgagaca
atcttagtacataacccaggctgaccaccaaaccaatttataattcccct
gcctcagcctcctgagttctgagattgccagtgtgttttcttgatgaatg
ggatagatcactgagtcagcaaggcccatggaacaggagaagaaatgttt
tagtgtttattttttcctttttctagcttgtggtcctttatatatgcaat
cacccttgacacaaagcatcctgtatccagcagtagttatcctgtccttg
tctctcagccagtcagtcgttggatgtctttgttaactcatcctgagtca
ataaaactgctatcagtgtgaaggtgaagatccattatgtgacccactgc
ccttcccaaaccatctccttgtccttttatccaagtatccctgaaactta
ccctcgggctggagagatgcccttcatctgtttctctgttcaagctgcta
tatttaaacaactgacagcttacaaaatagctctctgtctctc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaaccacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatcagggatccaccccataatca
gcatccaaacgctgacaccatttgcatatactagcaagattttatcgaaa
ggaccagatgtagctgtctcttgtgagactatgccgggctctagcaaaca
cagaagtggatgctcacagtcagctaatggatgatcacaggctcccaatg
aggagctagaaaaagtactcaggagcctaaagggatcttcatctattagt
tggatcaacattttgaacttacagtatccctgagctcctgactctagctg
cattgtattcaaagatgtgcctagtcgggccattactgaaagaagccatt
ggacacgccacacttttgtgctccgatacagggaacccctcaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80605240_80606391
seq2: B6Ng01-125L23.b_48_1190 (reverse)

seq1  GAGAGACAG-GAGCTATTTTGTAAGCTGTCAGTTGTCTAGAATAAGGCAG  49
      ||||||||| |||||||||||||||||||||||||| || ||||  ||||
seq2  GAGAGACAGAGAGCTATTTTGTAAGCTGTCAGTTGTTTA-AATATAGCAG  49

seq1  CCTGGAACAAGAGAAACAGATGAAGGGCATCTTCTCAGGCCCGAGGGTAA  99
       || |||| |||||||||||||||||||||| ||||  ||||||||||||
seq2  -CTTGAAC-AGAGAAACAGATGAAGGGCATC-TCTCCAGCCCGAGGGTAA  96

seq1  GTCTCAGGGATACCTTGGATTAAAGGGACAAGGGAAGATGGTTTGGGGAG  149
      || ||||||||| |||||| |||| ||||||||  |||||||||||| ||
seq2  GTTTCAGGGATA-CTTGGA-TAAAAGGACAAGG--AGATGGTTTGGGAAG  142

seq1  GGCAGGTGGGTCAACATAATGGATCTTCACCTTCACACTGATAGCAGTTT  199
      |||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGCA-GTGGGTC-ACATAATGGATCTTCACCTTCACACTGATAGCAGTTT  190

seq1  TATTGACTCAGGATGAGTTAACAAAGACATCCAACGACTGACTGGCTGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTCAGGATGAGTTAACAAAGACATCCAACGACTGACTGGCTGAG  240

seq1  AGACAAGGACAGGATAACTACTGCTGGATACAGGATGCTTTGTGTCAAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGACAGGATAACTACTGCTGGATACAGGATGCTTTGTGTCAAGG  290

seq1  GTGATTGCATATATAAAGGACCACAAGCTAGAAAAAGGAAAAAATAAACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGCATATATAAAGGACCACAAGCTAGAAAAAGGAAAAAATAAACA  340

seq1  CTAAAACATTTCTTCTCCTGTTCCATGGGCCTTGCTGACTCAGTGATCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACATTTCTTCTCCTGTTCCATGGGCCTTGCTGACTCAGTGATCTA  390

seq1  TCCCATTCATCAAGAAAACACACTGGCAATCTCAGAACTCAGGAGGCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTCATCAAGAAAACACACTGGCAATCTCAGAACTCAGGAGGCTGA  440

seq1  GGCAGGGGAATTATAAATTGGTTTGGTGGTCAGCCTGGGTTATGTACTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGGAATTATAAATTGGTTTGGTGGTCAGCCTGGGTTATGTACTAA  490

seq1  GATTGTCTCAAAAACCAAGGGTCAGAGATGTAGCTAAGTGATAGAGTATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCTCAAAAACCAAGGGTCAGAGATGTAGCTAAGTGATAGAGTATT  540

seq1  TGCTTAGCATGTATAAGGCCTATGTTCAACCCCCAGCAACACACATACAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGCATGTATAAGGCCTATGTTCAACCCCCAGCAACACACATACAC  590

seq1  ACACAAAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGACAGAGACAGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGACAGAGACAGAG  640

seq1  AGAGACAGAGAGACAGAGAGTCAGAGAGACAGAGAGAGAGACAAAGAGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGAGACAGAGAGTCAGAGAGACAGAGAGAGAGACAAAGAGAG  690

seq1  ACAGAGAGACAGAGACAGACAGAGACAGGGGCAGAGAGAAAGAAATAGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGACAGAGACAGACAGAGACAGGGGCAGAGAGAAAGAAATAGAG  740

seq1  ACAGAGAAAGACAGAGGTGGAGAGAGACAGAGAGACAAAGAGAGAAAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAAGACAGAGGTGGAGAGAGACAGAGAGACAAAGAGAGAAAAAG  790

seq1  AGAGGCAGAGACAGAGAAAGACAGATACAGAGGCAAAGGCACAGAGAACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGAGACAGAGAAAGACAGATACAGAGGCAAAGGCACAGAGAACT  840

seq1  CAGGGATGGATATAATTGCTACATCTCCTGCAAATTAGACCTTGGGAAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGGATATAATTGCTACATCTCCTGCAAATTAGACCTTGGGAAGA  890

seq1  CTGCAAATTATGCCCTACCAAATGTGGGCACAGTTGCTGATGATCTGCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAATTATGCCCTACCAAATGTGGGCACAGTTGCTGATGATCTGCCA  940

seq1  GTTTGTGTCTCACATTAAATTTTCCCCAGCACATGTGGCAGCAGACTACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTCTCACATTAAATTTTCCCCAGCACATGTGGCAGCAGACTACT  990

seq1  ACAGTTAAAATATTTAGAACTTCTGCCTAGTAAAGGGAGAACTACACAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAAAATATTTAGAACTTCTGCCTAGTAAAGGGAGAACTACACAGC  1040

seq1  ATGGTTGTCACCCACAGCACAGGGACATGGCCTGTTACACAGGAGATGAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTCACCCACAGCACAGGGACATGGCCTGTTACACAGGAGATGAG  1090

seq1  AAGACTCCTGATCAGTGGATGGGAAGAGATCCTAGTAGCAGCCTGGAGAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCCTGATCAGTGGATGGGAAGAGATCCTAGTAGCAGCCTGGAGAA  1140

seq1  TTC  1152
      |||
seq2  TTC  1143