BAC Information

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BAC

Clone NameB6Ng01-126L19
Chromosome14 (Build37)
Map Location 110,930,380 - 110,931,531
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126L19.bB6Ng01-126L19.g
ACCDH929028DH929029
length1,2271,122
definitionDH929028|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L19, 5' end.DH929029|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttgtgtatgggtgtaactcagctatctatagttctaagtatct
actctggttcctccttagatcacaaacttccttcttcctagataatggta
aattcctgtgtagtgcattttcttagctatccatgcccagggtctgctca
cagattgactaggactggtgaagaatctaacttagctatatgtcaaatag
aggcacttataataaagaaatattaagggaaagcacacagatccgtttac
ctactacagtaaggacattggagcattcgtttaacagaatgccacttttc
caggagcctaagtttccatgaactttttgccttgggacagtgctcaggtt
tttagggactgttgcatgtgtcactacaggagtggatgtagcatttccac
atatcagtgggtgcatatcatgtgtgttcttttgtgattaggttacctca
ctcaggatgatatatttcagatccttccacttgactaaaaatttcatgaa
ttgattaattttaatagctgagtagtagtccattgtggaaatgtaccaca
ttttctgtatccttcactctgttgagggacatctgggttctttccagctt
ctggctattataaatgagactgctatgaacatagtagagcttgtgtcctt
gttatatgttggagcatcttttgggtatatatccaggagtggtattgatg
gatcctcacattgtactatgtccaatttactgatgaactgtcaaactgat
ctccagactggttgtaccagcttgcaatcccaccaacaatgggcgagtgt
tcctctttctccacaacctgtttacccattgttccagtggttatcaagtt
gtggtgacccccccaactctaaaacgatttcattgttatttcataaatgc
aattgtgctagttattaatcataatgtaaataactgatatgcaaaaaatt
tagacatttcttatatacaaattacttgagatgcacccctaaaacaggtc
agatcacagatttagacagctatccttagtataggtaatggacacagagc
agatcacttgaaagaaatagaattcactgtactcttatggttcttacagc
tttatttttatattcgaatattttaattacgaaatatcactccctgctta
tttgaggatattcatgtaccattggaattgttatataaggcctatataaa
tggtgataatgtggcagcgtggtaaat
gaattcttttcattatgtgttccatatatctatcaccaattctggacacc
aatgaaatctcatagtagtactgtgctaaggacaagaaattattggtcag
tctgaagttgaatataccttaattaggtctcacagttcagtgatgtcttt
gtaaagttaaaatccaaagggatgcatatgtcctaagcatttgctgagga
aacctggttcatttcagagaaacacagaaaaaggaacataaccaataaaa
aaaatcataacttccatttgacatatactagtttatttttaactgtgttg
aattcaaaagggataaattttgtaattttatgacttacacctaatggaga
gaagaaacctgtacttttagtgttagatgaagcttataaatgtagtcaac
aacttaaaacttgtttgtacaaggggctggaaagctgtacttgcctagaa
tgtcagactcctgtcgtgttggcacaagtcactattttacttagggtagg
ctattgctgagccagaagagtaattgttcttttttgattatatcttgaac
gttatacaataaaagtttttgttttgttttttcatatttgaaacagagtt
ccactacggatgtgctgctgatgtttagggatgtgtgctgacttgctgtc
acacggatcacaagatgtttcacactcatgggttcactctgcctccagtg
tttaagaactttctctttttctgttttccttcaccaatgctttctttctt
tattattattattactataatcatcatcatcatcaatttatttattatgc
ttatatctcccttacttgctcctccaaatcagcctctctcaaaattcttc
ccccatctggttcctctctctctgagcatatgctacacacccccacccac
tctgcccttgggattccctacccggcatgtcaagtctcttgaaataagat
aatcctcttcccactggaacaggcaagcagccagcttatagagcatatca
tatttgcaggaacaactctgggctagcccattcaagtggtgtgacccatg
aaatcagcgtacatctgcttatattggtgtgggagctagtccagacacgt
atgttttggttgtgttcagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110930380_110931531
seq2: B6Ng01-126L19.g_67_1188 (reverse)

seq1  ATACTGAACCACCAACCAAAAAACATACGTGGCCTGGACCTAGGCCTCCC  50
      |||||||||   |||||  ||||||||||| | ||||| ||||  |||||
seq2  ATACTGAAC--ACAACC--AAAACATACGT-GTCTGGA-CTAG--CTCCC  42

seq1  -CACACATATGTAGCAGATGTACAGCTTGGATTTCATGTGGGTCAACAAC  99
       |||  ||||  ||||||||||| |||  |||||||  |||||||   ||
seq2  ACACCAATAT-AAGCAGATGTAC-GCT--GATTTCA--TGGGTCA--CAC  84

seq1  AACTGGAATGGGGGCTAGCCCAAGAGTTGTTCTCTGCATATATGATATGC  149
       ||| ||||  |||||||||| |||||||||| ||||| |||||||||||
seq2  CACTTGAAT--GGGCTAGCCC-AGAGTTGTTC-CTGCAAATATGATATGC  130

seq1  TCCTAT-AGCTGGGCTGCTTTGCCTGTTCCCAGTGGG-AGAGGATTTATC  197
      | |||| |||| |||||| ||||||||| |||||||| |||||| |||||
seq2  T-CTATAAGCT-GGCTGC-TTGCCTGTT-CCAGTGGGAAGAGGA-TTATC  175

seq1  TAATCTCAAAGAGACTTGACATGCCGGGGTAGGGGAATTCCCAAGGGCAG  247
      | || || ||||||||||||||||| ||||||||  | ||||||||||||
seq2  TTATTTC-AAGAGACTTGACATGCC-GGGTAGGG--AATCCCAAGGGCAG  221

seq1  AGGTGGGTGGGGGTGTGTAGCATATGCTCAGAGGAGAGGAGGAACCAAGA  297
      | |||||||||||||||||||||||||||||| |||| |||||||| |||
seq2  A-GTGGGTGGGGGTGTGTAGCATATGCTCAGA-GAGA-GAGGAACC-AGA  267

seq1  TGGGGGAAGAATTTTGAGAGAGGCTGATTTGGAGGAGCAAGTAAGGGAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAAGAATTTTGAGAGAGGCTGATTTGGAGGAGCAAGTAAGGGAGA  317

seq1  TATAAGCATAATAAATAAATTGATGATGATGATGATTATAGTAATAATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCATAATAAATAAATTGATGATGATGATGATTATAGTAATAATAA  367

seq1  TAATAAAGAAAGAAAGCATTGGTGAAGGAAAACAGAAAAAGAGAAAGTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGAAAGAAAGCATTGGTGAAGGAAAACAGAAAAAGAGAAAGTTC  417

seq1  TTAAACACTGGAGGCAGAGTGAACCCATGAGTGTGAAACATCTTGTGATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACACTGGAGGCAGAGTGAACCCATGAGTGTGAAACATCTTGTGATC  467

seq1  CGTGTGACAGCAAGTCAGCACACATCCCTAAACATCAGCAGCACATCCGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGACAGCAAGTCAGCACACATCCCTAAACATCAGCAGCACATCCGT  517

seq1  AGTGGAACTCTGTTTCAAATATGAAAAAACAAAACAAAAACTTTTATTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAACTCTGTTTCAAATATGAAAAAACAAAACAAAAACTTTTATTGT  567

seq1  ATAACGTTCAAGATATAATCAAAAAAGAACAATTACTCTTCTGGCTCAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGTTCAAGATATAATCAAAAAAGAACAATTACTCTTCTGGCTCAGC  617

seq1  AATAGCCTACCCTAAGTAAAATAGTGACTTGTGCCAACACGACAGGAGTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCTACCCTAAGTAAAATAGTGACTTGTGCCAACACGACAGGAGTC  667

seq1  TGACATTCTAGGCAAGTACAGCTTTCCAGCCCCTTGTACAAACAAGTTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTCTAGGCAAGTACAGCTTTCCAGCCCCTTGTACAAACAAGTTTT  717

seq1  AAGTTGTTGACTACATTTATAAGCTTCATCTAACACTAAAAGTACAGGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTGACTACATTTATAAGCTTCATCTAACACTAAAAGTACAGGTT  767

seq1  TCTTCTCTCCATTAGGTGTAAGTCATAAAATTACAAAATTTATCCCTTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTCCATTAGGTGTAAGTCATAAAATTACAAAATTTATCCCTTTT  817

seq1  GAATTCAACACAGTTAAAAATAAACTAGTATATGTCAAATGGAAGTTATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACAGTTAAAAATAAACTAGTATATGTCAAATGGAAGTTATG  867

seq1  ATTTTTTTTATTGGTTATGTTCCTTTTTCTGTGTTTCTCTGAAATGAACC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTATTGGTTATGTTCCTTTTTCTGTGTTTCTCTGAAATGAACC  917

seq1  AGGTTTCCTCAGCAAATGCTTAGGACATATGCATCCCTTTGGATTTTAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCCTCAGCAAATGCTTAGGACATATGCATCCCTTTGGATTTTAAC  967

seq1  TTTACAAAGACATCACTGAACTGTGAGACCTAATTAAGGTATATTCAACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAGACATCACTGAACTGTGAGACCTAATTAAGGTATATTCAACT  1017

seq1  TCAGACTGACCAATAATTTCTTGTCCTTAGCACAGTACTACTATGAGATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGACCAATAATTTCTTGTCCTTAGCACAGTACTACTATGAGATT  1067

seq1  TCATTGGTGTCCAGAATTGGTGATAGATATATGGAACACATAATGAAAAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTGTCCAGAATTGGTGATAGATATATGGAACACATAATGAAAAG  1117

seq1  AATTC  1152
      |||||
seq2  AATTC  1122