BAC Information

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BAC

Clone NameB6Ng01-127B08
Chromosome14 (Build37)
Map Location 80,262,426 - 80,399,713
singlet/doubletdoublet
Overlap geneEG629734
Upstream gene1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8
Downstream geneOlfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127B08.bB6Ng01-127B08.g
ACCDH929293DH929294
length1,150654
definitionDH929293|Mus musculus domesticus DNA, BAC clone: B6Ng01-127B08, 5' end.DH929294|Mus musculus domesticus DNA, BAC clone: B6Ng01-127B08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,262,426 - 80,263,491)(80,399,061 - 80,399,713)
sequence
gaattcacgcagttgaatccttctcaacagtctgttttatgggaacactt
cattaccatgacccgcagttctggttccggaatgagggatcttccttgcg
ccggtgatggtaaccgtcccaggttttctcgtcccaggtcttctcgtccg
gggtcttctcgtcccaggtcttctcgtcccgggtttcggcaccaactctt
acatgcgttctcgtgaccggccaggaaagacacaacaaaccggaatcttc
tgcggcaaaagctttattgcttacatcttcaggagccagagagcaagaga
gcaagagcaagaaaaagaacaagagcaagatagcaagagcaagagagaga
aaaagcaagaacaagagagagagagaaaatggcaaaaccccgtccctttt
aaggagaattatcctccgcctaggatgtattactccctgattggctgcag
cccatcggcccagttgtcatcacgagaaaggcagaacacatggcgggaaa
actgcccctgcacgtgtgcagattatgtttaccacttagaacacagctgt
cagcgccatcttataatggcaaatgtgagggcggctcccaacacccaggt
aggagtatgtgcagaacaattcagttggtgaaaaacgctgatgtgcctga
agttaagtgaatgctggaagaggggatgatggtgcaggagtctggaaaag
caggcaagagccagaccaggcagggacttgcaggtgacagcagggctctg
gatgtggattgtggatagcaaagggaggcagctctgaaagtttgtgcata
cacactgtgagctcatgcctgtgcacatgcattgtccagatgccctgaat
ccaagtgtaacaaggtgcatgttcagagctgaaccacagttgaagcaaga
gctttcaatttgatggcctacgttgatcatctggaaggcactgggaggtg
agaagtgaggacagggatgacttggtttctggttcgtggggcagctcatg
tgcgatggtgatgttgttcatcctctgagaaagaatcagggaggaaagtg
cagttctcaggaaggtctcaagttgagtctcaatggttgatttagcctct
ccagttttcattagtttatatggaataatggggggaaattgagtggtggg

gaattctgtttcccagagagagtggtatgggctcactttatttttttttc
tgaatatttttttaattaggtattttcctcatttacatttccaatgctat
cccaaaagtcccctatgcactcccaccccacccccctacccacccgctcc
cactttttggccctgacgttcccctgtactggggcatataaagtttgcaa
gtccaatgggcctctctttccactacaactttcgtctaagatatctgaag
actttctcttcagaacctgctgcccaggtcagctctggcctgctccttgc
cttatatccttctataccaagttctctcaacacccctaccaagattttgt
tctctagaaatccaacaagactctgcactttgtgattctaaaggaaaaga
agtagcccaaccgaataagagacccagatggcccatggattattcctcca
ggtcagggtagtgctcccaacccaaccaaagtagtccaacagaaggattt
ctctgacctccttgctacccactctgtgtggactagccaggtatttagga
ctcacatatcacttttcacactagtgaaagttgctagaatgccttctgtg
ttaccagttgacctagccctgtgctagggtcattgtgtataccttttata
aact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80262426_80263491
seq2: B6Ng01-127B08.b_141_1196

seq1  CTTGCGCCGGTGATGGTAACCGTCCCAGGTTTTCTCGTCCCAGGTCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGCCGGTGATGGTAACCGTCCCAGGTTTTCTCGTCCCAGGTCTTCT  50

seq1  CGTCCGGGGTCTTCTCGTCCCAGGTCTTCTCGTCCCGGGTTTCGGCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCGGGGTCTTCTCGTCCCAGGTCTTCTCGTCCCGGGTTTCGGCACCA  100

seq1  ACTCTTACATGCGTTCTCGTGACCGGCCAGGAAAGACACAACAAACCGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTACATGCGTTCTCGTGACCGGCCAGGAAAGACACAACAAACCGGA  150

seq1  ATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGC  200

seq1  AAGAGAGCAAGAGCAAGAAAAAGAACAAGAGCAAGATAGCAAGAGCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCAAGAGCAAGAAAAAGAACAAGAGCAAGATAGCAAGAGCAAGA  250

seq1  GAGAGAAAAAGCAAGAACAAGAGAGAGAGAGAAAATGGCAAAACCCCGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAAAGCAAGAACAAGAGAGAGAGAGAAAATGGCAAAACCCCGTC  300

seq1  CCTTTTAAGGAGAATTATCCTCCGCCTAGGATGTATTACTCCCTGATTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAGGAGAATTATCCTCCGCCTAGGATGTATTACTCCCTGATTGG  350

seq1  CTGCAGCCCATCGGCCCAGTTGTCATCACGAGAAAGGCAGAACACATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCCATCGGCCCAGTTGTCATCACGAGAAAGGCAGAACACATGGC  400

seq1  GGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACAC  450

seq1  AGCTGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCCAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCCAACAC  500

seq1  CCAGGTAGGAGTATGTGCAGAACAATTCAGTTGGTGAAAAACGCTGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAGGAGTATGTGCAGAACAATTCAGTTGGTGAAAAACGCTGATGT  550

seq1  GCCTGAAGTTAAGTGAATGCTGGAAGAGGGGATGATGGTGCAGGAGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGTTAAGTGAATGCTGGAAGAGGGGATGATGGTGCAGGAGTCTG  600

seq1  GAAAAGCAGGCAAGAGCCAGACCAGGCAGGGACTTGCAGGTGACAGCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGGCAAGAGCCAGACCAGGCAGGGACTTGCAGGTGACAGCAGG  650

seq1  GCTCTGGATGTGGATTGTGGATAGCAAAGGGAGGCAGCTCTGAAAGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGATGTGGATTGTGGATAGCAAAGGGAGGCAGCTCTGAAAGTTTG  700

seq1  TGCATACACACTGTGAGCTCATGCCTGTGCACATGCATTGTCCAGATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACACACTGTGAGCTCATGCCTGTGCACATGCATTGTCCAGATGCC  750

seq1  CTGAATCCAAGTGTAACAAGGTGCATGTTCAGAGCTGAACCACAGTTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCCAAGTGTAACAAGGTGCATGTTCAGAGCTGAACCACAGTTGAA  800

seq1  GCAAGAGCTTTCAATTTGATGGCCTACGTTGATCATCTGGAAGGCACTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGCTTTCAATTTGATGGCCTACGTTGATCATCTGGAAGGCACTGG  850

seq1  GAGGTGAGAAGTGAGGACAGGGATGACTTGGTTTCTGGTTCGTGGGGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGAGAAGTGAGGACAGGGATGACTTGGTTTCTGGTTCGTGGGGCAG  900

seq1  GCTTCATGGTGGCGATGGTGATGTTGTTCATTCTCTGAGAAAGAACCAGG  950
         |||||   |||||||||||||||||||| ||||||||||||| ||||
seq2  --CTCATG--TGCGATGGTGATGTTGTTCATCCTCTGAGAAAGAATCAGG  946

seq1  GAGGAAAGTGCAGTTCTCAGGGAAGGTCTCAAGTTGAGTCTCAAATGTGT  1000
      ||||||||||||||||||| |||||||||||||||||||||| |||| ||
seq2  GAGGAAAGTGCAGTTCTCA-GGAAGGTCTCAAGTTGAGTCTC-AATG-GT  993

seq1  TGAATTTAAGCCTCT-CAGTTTTCATTAGTTTTTATTATGGAATTAAATG  1049
      |||  || ||||||| ||||||||||||||||    ||||||||  ||||
seq2  TGA--TTTAGCCTCTCCAGTTTTCATTAGTTT---ATATGGAAT--AATG  1036

seq1  GGTGG-AATTGA--GGTGGG  1066
      || || ||||||  ||||||
seq2  GGGGGAAATTGAGTGGTGGG  1056

seq1: chr14_80399061_80399713
seq2: B6Ng01-127B08.g_68_721 (reverse)

seq1  AGGTTAT-AAAGGTATACACAATGA-CCTAGCACAGGGCTAGGTCAACTG  48
      || |||| ||||||||||||||||| ||||||||||||||||||||||| 
seq2  AGTTTATAAAAGGTATACACAATGACCCTAGCACAGGGCTAGGTCAACT-  49

seq1  GGTAACACAGAAGGCATTCTAGCAACTTTCACTAGTGTGAAAAGTGATAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACACAGAAGGCATTCTAGCAACTTTCACTAGTGTGAAAAGTGATAT  99

seq1  GTGAGTCCTAAATACCTGGCTAGTCCACACAGAGTGGGTAGCAAGGAGGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCCTAAATACCTGGCTAGTCCACACAGAGTGGGTAGCAAGGAGGT  149

seq1  CAGAGAAATCCTTCTGTTGGACTACTTTGGTTGGGTTGGGAGCACTACCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAATCCTTCTGTTGGACTACTTTGGTTGGGTTGGGAGCACTACCC  199

seq1  TGACCTGGAGGAATAATCCATGGGCCATCTGGGTCTCTTATTCGGTTGGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGAGGAATAATCCATGGGCCATCTGGGTCTCTTATTCGGTTGGG  249

seq1  CTACTTCTTTTCCTTTAGAATCACAAAGTGCAGAGTCTTGTTGGATTTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTTTTCCTTTAGAATCACAAAGTGCAGAGTCTTGTTGGATTTCT  299

seq1  AGAGAACAAAATCTTGGTAGGGGTGTTGAGAGAACTTGGTATAGAAGGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACAAAATCTTGGTAGGGGTGTTGAGAGAACTTGGTATAGAAGGAT  349

seq1  ATAAGGCAAGGAGCAGGCCAGAGCTGACCTGGGCAGCAGGTTCTGAAGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCAAGGAGCAGGCCAGAGCTGACCTGGGCAGCAGGTTCTGAAGAG  399

seq1  AAAGTCTTCAGATATCTTAGACGAAAGTTGTAGTGGAAAGAGAGGCCCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTCAGATATCTTAGACGAAAGTTGTAGTGGAAAGAGAGGCCCAT  449

seq1  TGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGTCAGGGCCAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGTCAGGGCCAAA  499

seq1  AAGTGGGAGCGGGTGGGTAGGGGGGTGGGGTGGGAGTGCATAGGGGACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAGCGGGTGGGTAGGGGGGTGGGGTGGGAGTGCATAGGGGACTT  549

seq1  TTGGGATAGCATTGGAAATGTAAATGAGGAAAATACCTAATTAAAAAAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATAGCATTGGAAATGTAAATGAGGAAAATACCTAATTAAAAAAAT  599

seq1  ATTCAGAAAAAAAAATAAAGTGAGCCCATACCACTCTCTCTGGGAAACAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAAAAAAAAATAAAGTGAGCCCATACCACTCTCTCTGGGAAACAG  649

seq1  AATTC  653
      |||||
seq2  AATTC  654