BAC Information

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BAC

Clone NameB6Ng01-128G10
Chromosome14 (Build37)13 (Build37)
Map Location 28,012,136 - 28,012,64931,869,889 - 31,869,966
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd
Downstream geneLOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370, Erc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128G10.bB6Ng01-128G10.g
ACCDH930261DH930262
length50884
definitionDH930261|Mus musculus domesticus DNA, BAC clone: B6Ng01-128G10, 5' end.DH930262|Mus musculus domesticus DNA, BAC clone: B6Ng01-128G10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(28,012,136 - 28,012,649)(31,869,889 - 31,869,966)
sequence
agcagagggacagctgagcatgacagggagatgtggagtttgtcactggg
gaaccccaaatcttgaagagtcgtgtggatgcattgtatctctgaataga
ttgttttttaatcacatctccctgagtagtccagattgccctcaaatcca
atcttcacacctcagcctcttcagcagctgggattacgtgcatgtcccca
gctcagagagtcatagattttcctagtcaaaaataccactaaatagaaca
ccttttaagagactagagccatgaatgggttttccaaagctgtcaaggtc
aaggaagaaacggtaaaatttgtcttaaaaattcttaaaaagccaattcc
atagtagtgatttcatagggtgaagactaaccaagtcacgtattccctga
atcatacttcctgttacatattcctggaatatgaaactttatgattcata
tacactaattttataatcataagatactagttggtttcttttgtgtgtgg
gggggggg
aagagaaaccctgtctcaaaaagaaaaaggaaggaaggaaggaaggaagg
aaggaaggaaggaaggaaggaaggaaggaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28012136_28012649
seq2: B6Ng01-128G10.b_45_558 (reverse)

seq1  CCCCCCCCCCACACACAAAAGAAACCAACTAGTATCTTATGATTATAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACACACAAAAGAAACCAACTAGTATCTTATGATTATAAAA  50

seq1  TTAGTGTATATGAATCATAAAGTTTCATATTCCAGGAATATGTAACAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTATATGAATCATAAAGTTTCATATTCCAGGAATATGTAACAGGA  100

seq1  AGTATGATTCAGGGAATACGTGACTTGGTTAGTCTTCACCCTATGAAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGATTCAGGGAATACGTGACTTGGTTAGTCTTCACCCTATGAAATC  150

seq1  ACTACTATGGAATTGGCTTTTTAAGAATTTTTAAGACAAATTTTACCGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTATGGAATTGGCTTTTTAAGAATTTTTAAGACAAATTTTACCGTT  200

seq1  TCTTCCTTGACCTTGACAGCTTTGGAAAACCCATTCATGGCTCTAGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTGACCTTGACAGCTTTGGAAAACCCATTCATGGCTCTAGTCTC  250

seq1  TTAAAAGGTGTTCTATTTAGTGGTATTTTTGACTAGGAAAATCTATGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGTGTTCTATTTAGTGGTATTTTTGACTAGGAAAATCTATGACT  300

seq1  CTCTGAGCTGGGGACATGCACGTAATCCCAGCTGCTGAAGAGGCTGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCTGGGGACATGCACGTAATCCCAGCTGCTGAAGAGGCTGAGGT  350

seq1  GTGAAGATTGGATTTGAGGGCAATCTGGACTACTCAGGGAGATGTGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGATTGGATTTGAGGGCAATCTGGACTACTCAGGGAGATGTGATTA  400

seq1  AAAAACAATCTATTCAGAGATACAATGCATCCACACGACTCTTCAAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAATCTATTCAGAGATACAATGCATCCACACGACTCTTCAAGATT  450

seq1  TGGGGTTCCCCAGTGACAAACTCCACATCTCCCTGTCATGCTCAGCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTCCCCAGTGACAAACTCCACATCTCCCTGTCATGCTCAGCTGTC  500

seq1  CCTCTGCTGAATTC  514
      ||||||||||||||
seq2  CCTCTGCTGAATTC  514

seq1: chr13_31869889_31869966
seq2: B6Ng01-128G10.g_74_156

seq1  AGAGAAACCCTGTCTCA-----AAAAAGGAAGGAAGGAAGGAAGGAAGGA  45
      |||||||||||||||||     ||||||||||||||||||||||||||||
seq2  AGAGAAACCCTGTCTCAAAAAGAAAAAGGAAGGAAGGAAGGAAGGAAGGA  50

seq1  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  78
      |||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  83