BAC Information

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BAC

Clone NameB6Ng01-129D17
Chromosome14 (Build37)
Map Location 37,274,853 - 37,351,142
singlet/doubletdoublet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
Downstream geneGcap14, LOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129D17.bB6Ng01-129D17.g
ACCDH930872DH930873
length826463
definitionDH930872|Mus musculus domesticus DNA, BAC clone: B6Ng01-129D17, 5' end.DH930873|Mus musculus domesticus DNA, BAC clone: B6Ng01-129D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,350,317 - 37,351,142)(37,274,853 - 37,275,320)
sequence
gaattcctggaccatgaaaattttaaaccaagacataataatcaagaatc
ataggaggggtggggtgttcgaatctagacagacactagaaaatttacaa
tattcattactgatgaattgaatatctgttcctaaagttcctagtgcctg
tgttaaaaagagaaatgcaggtcatcttcattttactgtactggaaaaaa
atatgtaacagttgtgcaaagcatctgggtctcatatccattaagcgtag
gtttcaagttacatcacataagcacggagctcatgctacactcagctccc
aaatcatagcgcttacaccaatttccaatttacaaagtgaaatgcaaatg
gaaaaccatgggctactgtgcatgtcacagatggagagaaagagcaagtg
tgatctttagcacagtcacactgtgcctcccacaatgaacagaaaaaaaa
aaaaaaagcttaaagagtgcctgccattaatgtaattcactgagtttgtt
tgctgcaagccaggtgtggtgtcgcacgcctatggaatggggatgcttcc
ctcaccaacaggatcctgagagctgactcctatggatctgtgttgtacat
gatctgaaagttccttttcccccatttattccccacagacgacagttctg
tctactttttctcattaagtgaggactaagaagaagaccgactagaactc
atcaaattaatgaaaagcttgttatttattcacctctgtacatcttcatt
gttccactgtggtgtaactagattctacttctgaaattgaactgtgttct
aacttctgaattggggggtggaggaa
actttacttacagatcaatgccctaaacacaactgtgcttttcagatgcc
tgagatcatggtcactccataactatattataaatctatgtttctctgta
agaattcttctaagagtatgtagaggtagaattagaattatattctcagg
gaaaaatctttgattcttcacaaaggaatgtctactttggagaaagaaaa
tgtgttttgttcagcaattagctccttgtttcctgtcttttcaacataga
tgtgcactgaaggaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaggaagaagaggaagaag
aggaagaagaggaggaggaggaggaggaggaagaagaagaaaagaaggag
gaggaggaactgctagcaaatctagagcacaaaacagttgttatgtcttg
aatccgggcctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_37350317_37351142
seq2: B6Ng01-129D17.b_49_874 (reverse)

seq1  TTCCTCCACCCCC--ATTCAG-AGTTAGAACACAGCTTCAGCTTCAGGTG  47
      |||||||||||||  |||||| ||||||||||||| ||||  |||||  |
seq2  TTCCTCCACCCCCCAATTCAGAAGTTAGAACACAG-TTCAATTTCAGAAG  49

seq1  TAGAATCTAGCTACACCCCAGTGGAACAATGAAGGATGCTACAGAGGTGA  97
      |||||||||| |||||| ||||||||||||||| |||| |||||||||||
seq2  TAGAATCTAGTTACACCACAGTGGAACAATGAA-GATG-TACAGAGGTGA  97

seq1  ATAAATAACAAGCTTTTCATTAATTCTGATTGAGTTCTAGTCGGTCTTCT  147
      ||||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  ATAAATAACAAGCTTTTCATTAATT-TGA-TGAGTTCTAGTCGGTCTTCT  145

seq1  TCTTAGTCCTCACTTAATGAGAAAAAGTAGACAGAACTGTCGTCTGT-GG  196
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTTAGTCCTCACTTAATGAGAAAAAGTAGACAGAACTGTCGTCTGTGGG  195

seq1  GAAT-AATGGGGG-AAAGGAACTTTCAGATCATGTACAACACAGATCCAT  244
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAATAAATGGGGGAAAAGGAACTTTCAGATCATGTACAACACAGATCCAT  245

seq1  AGGAGTCAGCTCTCAGGATCCTGTTGGTGAGGGAAGCATCCCCATTCCAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCAGCTCTCAGGATCCTGTTGGTGAGGGAAGCATCCCCATTCCAT  295

seq1  AGGCGTGCGACACCACACCTGGCTTGCAGCAAACAAACTCAGTGAATTAC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTGCGACACCACACCTGGCTTGCAGCAAACAAACTCAGTGAATTAC  345

seq1  ATTAATGGCAGGCACTCTTTAAGCTTTTTTTTTTTTTTTTCTGTTCATTG  394
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATTAATGGCAGGCACTCTTTAAGC-TTTTTTTTTTTTTTTCTGTTCATTG  394

seq1  TGGGAGGCACAGTGTGACTGTGCTAAAGATCACACTTGCTCTTTCTCTCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCACAGTGTGACTGTGCTAAAGATCACACTTGCTCTTTCTCTCC  444

seq1  ATCTGTGACATGCACAGTAGCCCATGGTTTTCCATTTGCATTTCACTTTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGACATGCACAGTAGCCCATGGTTTTCCATTTGCATTTCACTTTG  494

seq1  TAAATTGGAAATTGGTGTAAGCGCTATGATTTGGGAGCTGAGTGTAGCAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGAAATTGGTGTAAGCGCTATGATTTGGGAGCTGAGTGTAGCAT  544

seq1  GAGCTCCGTGCTTATGTGATGTAACTTGAAACCTACGCTTAATGGATATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCGTGCTTATGTGATGTAACTTGAAACCTACGCTTAATGGATATG  594

seq1  AGACCCAGATGCTTTGCACAACTGTTACATATTTTTTTCCAGTACAGTAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAGATGCTTTGCACAACTGTTACATATTTTTTTCCAGTACAGTAA  644

seq1  AATGAAGATGACCTGCATTTCTCTTTTTAACACAGGCACTAGGAACTTTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGATGACCTGCATTTCTCTTTTTAACACAGGCACTAGGAACTTTA  694

seq1  GGAACAGATATTCAATTCATCAGTAATGAATATTGTAAATTTTCTAGTGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGATATTCAATTCATCAGTAATGAATATTGTAAATTTTCTAGTGT  744

seq1  CTGTCTAGATTCGAACACCCCACCCCTCCTATGATTCTTGATTATTATGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAGATTCGAACACCCCACCCCTCCTATGATTCTTGATTATTATGT  794

seq1  CTTGGTTTAAAATTTTCATGGTCCAGGAATTC  826
      ||||||||||||||||||||||||||||||||
seq2  CTTGGTTTAAAATTTTCATGGTCCAGGAATTC  826

seq1: chr14_37274853_37275320
seq2: B6Ng01-129D17.g_67_535

seq1  GAATTCACTTTACTTACAGATCAATGCCCTAAACACAACTGTGCTTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTACTTACAGATCAATGCCCTAAACACAACTGTGCTTTTCA  50

seq1  GATGCCTGAGATCATGGTCACTCCATAACTATATTATAAATCTATGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTGAGATCATGGTCACTCCATAACTATATTATAAATCTATGTTTC  100

seq1  TCTGTAAGAATTCTTCTAAGAGTATGTAGAGGTAGAATTAGAATTATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGAATTCTTCTAAGAGTATGTAGAGGTAGAATTAGAATTATATT  150

seq1  CTCAGGGAAAAATCTTTGATTCTTCACAAAGGAATGTCTACTTTGGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGAAAAATCTTTGATTCTTCACAAAGGAATGTCTACTTTGGAGAA  200

seq1  AGAAAATGTGTTTTGTTCAGCAATTAGCTCCTTGTTTCCTGTCTTTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTGTTTTGTTCAGCAATTAGCTCCTTGTTTCCTGTCTTTTCAA  250

seq1  CATAGATGTGCACTGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATGTGCACTGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  300

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGG  350

seq1  AAGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAAAG  400

seq1  AAGGAGGAGGAGGAACTGCTAGCAAATCTAGAGCACAAAACAGTTGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGAGGAGGAACTGCTAGCAAATCTAGAGCACAAAACAGTTGTTAT  450

seq1  GTCATGAA-CCGGGCCTAG  468
      ||| |||| ||||||||||
seq2  GTCTTGAATCCGGGCCTAG  469