BAC Information

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BAC

Clone NameB6Ng01-129N19
Chromosome14 (Build37)
Map Location 82,639,569 - 82,784,845
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129N19.bB6Ng01-129N19.g
ACCDH931336DH931337
length1,2341,085
definitionDH931336|Mus musculus domesticus DNA, BAC clone: B6Ng01-129N19, 5' end.DH931337|Mus musculus domesticus DNA, BAC clone: B6Ng01-129N19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,639,569 - 82,640,840)(82,783,766 - 82,784,845)
sequence
gaattcactagttttcatactctattctgtttctctatgaactttgtact
tgattagagatattttatacctcatgactacattattctgccaagatttt
taaataaactatgccataggtatataacaagccacaaaccctgcttaaag
tagctcactgtagtcttcctggtctttctcttttcatgtgctcttatggc
ttctctgtgacacacagtgcagtggttcaacattgccttagctcttgaac
taaattaggtcctcttcccatatttttgtcatttctcaagatcttgtata
ttcttctttaggtactttcatatttgaaataatgagatgtctcaggccat
gttacacctctttattgtcttctactgtattgtattcatacctaatctca
ttacagttctgaacgttgagctacaagaaacaattctacatttcagtgtg
gaaactgtaagttcaaacttaatgaatgctatggtgctctatccagaatt
gaaactcctgtgatttaattatttggtaaataacaacatggacctaaaca
acatcaaattggattatttacaatgcaataagtggaaagtaaacgttttt
gttattcaattgtttaaagttttgtgccatctttctctttaacacaacaa
cctcaatttgttatttttttttcagcactctgaatataccataagcaata
ttctaaggttgaccaagatccacatttttccttcttccattacaaggtta
agctgttaacgtgaaatcatgtaactgtgatatagttcatctaaaaatga
ttttcattgtattttaatccgtatatgccatttgcacttgaacttattaa
cacaacttctctgtttctcccattctcctgtatgtccctattaagatggt
tccaggctttttttttttaaccaaaattactgtactttcctgtcctatgc
cttccattacccctttgtttctccttctctcattttcataaggtctgttc
ttgattacttaccacattttatgctttcatgaccctccacccccaacaac
tcataaacagaggtgtttgaatagaatggaaagtgactttctatctgagt
cagacccattttctaaatgaattcatttaaacagcaagttcttaagcgaa
accatccgggttccaataccaattctcattgccaccttgtatacttaagg
tgctcgaattcggacggaaccacatagttaagca
gaattcagaaatacaatgttattgaaggactaagtaagttttcatggaac
ttttaggcagaatttcctgtgtaaaccttaccgaagatatgacatgttca
ttggtttcaaccaattcattgatgcaatcaggtaaagcctgaggcttgct
aataggaaataaacaggttatgcttgactccaagactaaaatatttttta
atcttacatgttgacttgaagtacaaatgcttcaggaccaaaccattcag
ataccttttctagctagcaatgtcagtattttatttcactgtcatttgtt
ctaactacatacaaaaatagaaaaaaaaaaacacaacaaaagcaaataat
aagatttacttagcacttcctgcactttttcacaacctagagcctttacg
tgttgctataaactattaaaacattttatttttttcacgttaactatagg
gggacattatatttacttaatgtaattcaattcatagaatctgagtttac
catgtttctattttcacaaggcagacagacaccataaccatataggtggt
tttcccaaagggaggcttatctattgcagcccagaggtgctgaagattgt
gatttgcccaaatgtaggaaacccaatggaataccatatagtagtggcaa
gattatttctgaactctcttctattatacaaaaaaattaaatgttgctat
tttctggaaaaaatatataaagatattaatttctgtgctatgctgcttaa
gactattttcagttataagtttagggagtcactgaaatctacatatgtat
tgggctagttccattcctgctgcagtgattagacaccatgaccaaaagca
aattgatggagagaagggccttattcagctaacagatctgaagaattatc
caatatgcagggaagttactggcccatgggcaggatatgcaacaactggc
cacattacattcacaggaaagaagtgagccacatccatgctgactgactg
cttgtccatgctcagaatactttctttattgttatccatttcaagaggcc
agaccctgaaatgattgaccctctttatattagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82639569_82640840
seq2: B6Ng01-129N19.b_50_1283

seq1  GAATTCACTAGTTTTCATACTCTATTCTGTTTCTCTATGAACTTTGTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGTTTTCATACTCTATTCTGTTTCTCTATGAACTTTGTACT  50

seq1  TGATTAGAGATATTTTATACCTCATGACTACATTATTCTGCCAAGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGAGATATTTTATACCTCATGACTACATTATTCTGCCAAGATTTT  100

seq1  TAAATAAACTATGCCATAGGTATATAACAAGCCACAAACCCTGCTTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAACTATGCCATAGGTATATAACAAGCCACAAACCCTGCTTAAAG  150

seq1  TAGCTCACTGTAGTCTTCCTGGTCTTTCTCTTTTCATGTGCTCTTATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCACTGTAGTCTTCCTGGTCTTTCTCTTTTCATGTGCTCTTATGGC  200

seq1  TTCTCTGTGACACACAGTGCAGTGGTTCAACATTGCCTTAGCTCTTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGACACACAGTGCAGTGGTTCAACATTGCCTTAGCTCTTGAAC  250

seq1  TAAATTAGGTCCTCTTCCCATATTTTTGTCATTTCTCAAGATCTTGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAGGTCCTCTTCCCATATTTTTGTCATTTCTCAAGATCTTGTATA  300

seq1  TTCTTCTTTAGGTACTTTCATATTTGAAATAATGAGATGTCTCAGGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTAGGTACTTTCATATTTGAAATAATGAGATGTCTCAGGCCAT  350

seq1  GTTACACCTCTTTATTGTCTTCTACTGTATTGTATTCATACCTAATCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACCTCTTTATTGTCTTCTACTGTATTGTATTCATACCTAATCTCA  400

seq1  TTACAGTTCTGAACGTTGAGCTACAAGAAACAATTCTACATTTCAGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTCTGAACGTTGAGCTACAAGAAACAATTCTACATTTCAGTGTG  450

seq1  GAAACTGTAAGTTCAAACTTAATGAATGCTATGGTGCTCTATCCAGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTAAGTTCAAACTTAATGAATGCTATGGTGCTCTATCCAGAATT  500

seq1  GAAACTCCTGTGATTTAATTATTTGGTAAATAACAACATGGACCTAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCCTGTGATTTAATTATTTGGTAAATAACAACATGGACCTAAACA  550

seq1  ACATCAAATTGGATTATTTACAATGCAATAAGTGGAAAGTAAACGTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAATTGGATTATTTACAATGCAATAAGTGGAAAGTAAACGTTTTT  600

seq1  GTTATTCAATTGTTTAAAGTTTTGTGCCATCTTTCTCTTTAACACAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCAATTGTTTAAAGTTTTGTGCCATCTTTCTCTTTAACACAACAA  650

seq1  CCTCAATTTGTTATTTTTTTTTCAGCACTCTGAATATACCATAAGCAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATTTGTTATTTTTTTTTCAGCACTCTGAATATACCATAAGCAATA  700

seq1  TTCTAAGGTTGACCAAGATCCACATTTTTCCTTCTTCCATTACAAGGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGTTGACCAAGATCCACATTTTTCCTTCTTCCATTACAAGGTTA  750

seq1  AGCTGTTAACGTGAAATCATGTAACTGTGATATAGTTCATCTAAAAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTAACGTGAAATCATGTAACTGTGATATAGTTCATCTAAAAATGA  800

seq1  TTTTCATTGTATTTTAATCCGTATATGCCATTTGCACTTGAACTTATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTGTATTTTAATCCGTATATGCCATTTGCACTTGAACTTATTAA  850

seq1  CACAACTTCTCTGTTTCTCCCATTCTCCTGTATGTCCCTATTAAGATGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTCTCTGTTTCTCCCATTCTCCTGTATGTCCCTATTAAGATGGT  900

seq1  TCCAGGCTTTTTTTTTTTAACCAAAATTACTGTACTTTCCTGTCCTATGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCTTTTTTTTTTTAACCAAAATTACTGTACTTTCCTGTCCTATGC  950

seq1  CTTCCATTACCCCTTTGTTTCTTCCTTCTCTCATTTTCATAAGGTCTGTT  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTCCATTACCCCTTTGTTTC-TCCTTCTCTCATTTTCATAAGGTCTGTT  999

seq1  CTTGATTACTTACCAACCATTTTTATGCTTTCATGACCCTCCACCCCCAA  1050
      |||||||||||||||  || ||||||||||||||||||||||||||||||
seq2  CTTGATTACTTACCA--CA-TTTTATGCTTTCATGACCCTCCACCCCCAA  1046

seq1  CACACTCATACACAGAGGTGTTTGAATAGAATGGAAAGTAGACCTTTCTA  1100
      || ||||||| |||||||||||||||||||||||||||| || |||||||
seq2  CA-ACTCATAAACAGAGGTGTTTGAATAGAATGGAAAGT-GA-CTTTCTA  1093

seq1  TCTGAGTCAGACCCATTTTTCTTAACATGATTTCCATTTTTTAACACAGC  1150
      ||||||||||||||| ||||||  | |||| || |||||    | |||||
seq2  TCTGAGTCAGACCCA-TTTTCT--AAATGAATT-CATTT----AAACAGC  1135

seq1  ATAGTTTTCTTTATGGCTGAATACAATTCTGTGTTTCTAAATACCATAAT  1200
      | ||  ||||| |  || |||  ||  || | ||| |  ||||||  |||
seq2  A-AG--TTCTTAA--GC-GAAACCA--TCCGGGTTCC--AATACC--AAT  1173

seq1  TTCTTCATGTGCTCATCTTTTGATATACATTTAGGTTTGCTTGATTTTCT  1250
      |   |||| ||| || |||    ||||| || |||  |||| || ||   
seq2  T--CTCAT-TGC-CACCTT---GTATAC-TTAAGG--TGCTCGAATT--C  1211

seq1  GGACGTGA-CACATAGTTAAGCA  1272
      |||||  | ||||||||||||||
seq2  GGACGGAACCACATAGTTAAGCA  1234

seq1: chr14_82783766_82784845
seq2: B6Ng01-129N19.g_69_1153 (reverse)

seq1  AGCTAATAT-AAGA-GGTCAATCATTTCAGGGTCTGGCCTC-TGAAATGA  47
      ||||||||| |||| |||||||||||||||||||||||||| ||||||| 
seq2  AGCTAATATAAAGAGGGTCAATCATTTCAGGGTCTGGCCTCTTGAAATGG  50

seq1  ATAACAATAAAGAAAGTA-TCTGAGCATGGAC-AGCAGTCAGTCAGCATG  95
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  ATAACAATAAAGAAAGTATTCTGAGCATGGACAAGCAGTCAGTCAGCATG  100

seq1  GATGT-GCTCACTTCTTTTCCTGTGAATGTAATTGTGGCCAGTTGTTGCA  144
      ||||| ||||||||| |||||||||||||||| |||||||||||||||||
seq2  GATGTGGCTCACTTC-TTTCCTGTGAATGTAA-TGTGGCCAGTTGTTGCA  148

seq1  TATTCCTG-CCATTGGCCAGTAACTTCCCTGCATATTGGATTATTCTTCA  193
      || ||||| |||| ||||||||||||||||||||||||||| ||||||||
seq2  TA-TCCTGCCCATGGGCCAGTAACTTCCCTGCATATTGGATAATTCTTCA  197

seq1  GATCTGTTAGCTGAATAAGGCCCTTCTCTCCATC-ATTTGCTTTTGGTCA  242
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATCTGTTAGCTGAATAAGGCCCTTCTCTCCATCAATTTGCTTTTGGTCA  247

seq1  TGGTGTCTAATCACTGCAGCAGGAATGGAACTAGCCCAATACATATGTAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCTAATCACTGCAGCAGGAATGGAACTAGCCCAATACATATGTAG  297

seq1  ATTTCAGTGACTCCCTAAACTTATAACTGAAAATAGTCTTAAGCAGCATA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTGACTCCCTAAACTTATAACTGAAAATAGTCTTAAGCAGCATA  347

seq1  GCACAGAAATTAATATCTTTATATATTTTTTCCAGAAAATAGCAACATTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAAATTAATATCTTTATATATTTTTTCCAGAAAATAGCAACATTT  397

seq1  AATTTTTTTGTATAATAGAAGAGAGTTCAGAAATAATCTTGCCACTACTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTGTATAATAGAAGAGAGTTCAGAAATAATCTTGCCACTACTA  447

seq1  TATGGTATTCCATTGGGTTTCCTACATTTGGGCAAATCACAATCTTCAGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTATTCCATTGGGTTTCCTACATTTGGGCAAATCACAATCTTCAGC  497

seq1  ACCTCTGGGCTGCAATAGATAAGCCTCCCTTTGGGAAAACCACCTATATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGGGCTGCAATAGATAAGCCTCCCTTTGGGAAAACCACCTATATG  547

seq1  GTTATGGTGTCTGTCTGCCTTGTGAAAATAGAAACATGGTAAACTCAGAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGTGTCTGTCTGCCTTGTGAAAATAGAAACATGGTAAACTCAGAT  597

seq1  TCTATGAATTGAATTACATTAAGTAAATATAATGTCCCCCTATAGTTAAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAATTGAATTACATTAAGTAAATATAATGTCCCCCTATAGTTAAC  647

seq1  GTGAAAAAAATAAAATGTTTTAATAGTTTATAGCAACACGTAAAGGCTCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAAAATAAAATGTTTTAATAGTTTATAGCAACACGTAAAGGCTCT  697

seq1  AGGTTGTGAAAAAGTGCAGGAAGTGCTAAGTAAATCTTATTATTTGCTTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTGAAAAAGTGCAGGAAGTGCTAAGTAAATCTTATTATTTGCTTT  747

seq1  TGTTGTGTTTTTTTTTTTCTATTTTTGTATGTAGTTAGAACAAATGACAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGTTTTTTTTTTTCTATTTTTGTATGTAGTTAGAACAAATGACAG  797

seq1  TGAAATAAAATACTGACATTGCTAGCTAGAAAAGGTATCTGAATGGTTTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAAATACTGACATTGCTAGCTAGAAAAGGTATCTGAATGGTTTG  847

seq1  GTCCTGAAGCATTTGTACTTCAAGTCAACATGTAAGATTAAAAAATATTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAAGCATTTGTACTTCAAGTCAACATGTAAGATTAAAAAATATTT  897

seq1  TAGTCTTGGAGTCAAGCATAACCTGTTTATTTCCTATTAGCAAGCCTCAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTGGAGTCAAGCATAACCTGTTTATTTCCTATTAGCAAGCCTCAG  947

seq1  GCTTTACCTGATTGCATCAATGAATTGGTTGAAACCAATGAACATGTCAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACCTGATTGCATCAATGAATTGGTTGAAACCAATGAACATGTCAT  997

seq1  ATCTTCGGTAAGGTTTACACAGGAAATTCTGCCTAAAAGTTCCATGAAAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGGTAAGGTTTACACAGGAAATTCTGCCTAAAAGTTCCATGAAAA  1047

seq1  CTTACTTAGTCCTTCAATAACATTGTATTTCTGAATTC  1080
      ||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTAGTCCTTCAATAACATTGTATTTCTGAATTC  1085