BAC Information

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BAC

Clone NameB6Ng01-129O20
Chromosome14 (Build37)
Map Location 25,990,453 - 26,120,286
singlet/doubletdoublet
Overlap genenone
Upstream geneDlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315, LOC100039411
Downstream geneZmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129O20.bB6Ng01-129O20.g
ACCDH931386DH931387
length1,206923
definitionDH931386|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O20, 5' end.DH931387|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,990,453 - 25,991,656)(26,119,368 - 26,120,286)
sequence
gaattctggaccctgagtctctcaagattctctcctgagcaccaggtagt
tagcctcccagagagcatcttccctatcactgacccactgcctccacaca
ctgtctcttccaacctttgcaatgacaatgtcttgtcacccacctcttag
ctccccgaccagcctctcctgacctcaacctgtccacctctacccaccta
ggcccgactccttgaggccttcactgccatcatccctacctacatccatt
gttgctcttttctattcccctccctccttctgcggtagaactcaaataca
acccaatctcacctgttatttcctggacacctacaacaccatccagtgtc
tgcaaagatcacctcaagactacaaataggtgctggagttccaactatta
aattgcacatatcagaaaatataaataaaagtaggatttgtgatagcact
tgttaaaagagacacacaaacatagacgcacacacacacacacactgatg
aaactgaaagcaacatcttcactggagttgtggcttctctgaaggcaagt
gtttactgggaaagagacgaataaaaggatattgcagaagaccctgtagc
ctctgccatgagacacctgcatcacttcctgggggaggagacgcccatca
gctcctgagaatggaagcagttaccctagagaaccctcaaggagaggact
tgtcattgagattctatctgctgttccccagtgttcacccacagaaacag
tagatcaggctctggctgggccctggctatagcctgcctcagtgagacct
cctatcagtgctcaatcagagtctacttgacaggacctgttaaagggact
ccctgggatttccctggcaccctggggccaggcctttcaaaagagaaaaa
gaagagtggccagcagctctctcctggcaatactgaccacagctaagtgg
ttcgtcggatgaaagccaatgtcagtgtgggcatgaactcaggcttcaca
tccatggtccctttccacagtgggatgcagaggaaaaaatgctccccctc
ctttcaatggaaagttcatgagccaggagcagggaaggctgcctgggaat
agtctaacttcaaagtgctatagccttcgagggggaaggctgaacaacca
ctttaatccccacaggacaatgtgcaagcaatatgtctctaggtgctctg
aagtgg
gaattctttaattatttcattttcctttctctcctccatccctccactcc
tttgttcccacgctgccgctccctcccgcttaccatctatggtatgtcta
gtctggcaaccatttaaatttaaattagctgaaatgaaactaaaccagat
ctggtagctcaggccaaaatcccagttactcaggaggctgaggcaggagg
attgcaagttcaaagtctttgtggaccgcagagtgagtttaagtccatcc
caggaaacttcactagaccttgtttcaaaaatacgaagtgaatcctgagc
tgggcttagttcagtggcagagcccctgctcagcatggacaaggacccaa
gttcaagcctagaatggcaaacatgcacattgacaaactgaaccaaccaa
aacattcatttcccagtcgacgggccacttttgggtggctcaacagccaa
cctcgtctgctggatggtaaatggagatgtgggcaattccactgcgcagc
tggcaccttgcagtttgcctgggttgacaatccatgtgggagtgactgag
aggggaatcagagctgagacggctcccttcatagtgcttacactctgctg
agagggagaccgcaaggccattgtagttggatgtagctgcagccaagcag
caggtgataggtacccctgcagttaaccagctagtgagcttctgagccag
cctagtgactggagagaggcagaagagcaacttggtgagcagggactgca
gcatcctgtctgtttgcacctgtgtttgagggtaagcctagtccccagtg
cacaggccccacttgtgagcttcagataaagatgccaccttggggacttg
ccatttcttcaagccagagagacttcagaggcacagccctgggccacagc
acactgctgggagggcgtcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25990453_25991656
seq2: B6Ng01-129O20.b_46_1251

seq1  GAATTCTGGACCCTGAGTCTCTCAAGATTCTCTCCTGAGCACCAGGTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGACCCTGAGTCTCTCAAGATTCTCTCCTGAGCACCAGGTAGT  50

seq1  TAGCCTCCCAGAGAGCATCTTCCCTATCACTGACCCACTGCCTCCACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCCCAGAGAGCATCTTCCCTATCACTGACCCACTGCCTCCACACA  100

seq1  CTGTCTCTTCCAACCTTTGCAATGACAATGTCTTGTCACCCACCTCTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTTCCAACCTTTGCAATGACAATGTCTTGTCACCCACCTCTTAG  150

seq1  CTCCCCGACCAGCCTCTCCTGACCTCAACCTGTCCACCTCTACCCACCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCGACCAGCCTCTCCTGACCTCAACCTGTCCACCTCTACCCACCTA  200

seq1  GGCCCGACTCCTTGAGGCCTTCACTGCCATCATCCCTACCTACATCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGACTCCTTGAGGCCTTCACTGCCATCATCCCTACCTACATCCATT  250

seq1  GTTGCTCTTTTCTATTCCCCTCCCTCCTTCTGCGGTAGAACTCAAATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCTTTTCTATTCCCCTCCCTCCTTCTGCGGTAGAACTCAAATACA  300

seq1  ACCCAATCTCACCTGTTATTTCCTGGACACCTACAACACCATCCAGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATCTCACCTGTTATTTCCTGGACACCTACAACACCATCCAGTGTC  350

seq1  TGCAAAGATCACCTCAAGACTACAAATAGGTGCTGGAGTTCCAACTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGATCACCTCAAGACTACAAATAGGTGCTGGAGTTCCAACTATTA  400

seq1  AATTGCACATATCAGAAAATATAAATAAAAGTAGGATTTGTGATAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCACATATCAGAAAATATAAATAAAAGTAGGATTTGTGATAGCACT  450

seq1  TGTTAAAAGAGACACACAAACATAGACGCACACACACACACACACTGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAAGAGACACACAAACATAGACGCACACACACACACACACTGATG  500

seq1  AAACTGAAAGCAACATCTTCACTGGAGTTGTGGCTTCTCTGAAGGCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAAGCAACATCTTCACTGGAGTTGTGGCTTCTCTGAAGGCAAGT  550

seq1  GTTTACTGGGAAAGAGACGAATAAAAGGATATTGCAGAAGACCCTGTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTGGGAAAGAGACGAATAAAAGGATATTGCAGAAGACCCTGTAGC  600

seq1  CTCTGCCATGAGACACCTGCATCACTTCCTGGGGGAGGAGACGCCCATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCATGAGACACCTGCATCACTTCCTGGGGGAGGAGACGCCCATCA  650

seq1  GCTCCTGAGAATGGAAGCAGTTACCCTAGAGAACCCTCAAGGAGAGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGAGAATGGAAGCAGTTACCCTAGAGAACCCTCAAGGAGAGGACT  700

seq1  TGTCATTGAGATTCTATCTGCTGTTCCCCAGTGTTCACCCACAGAAACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTGAGATTCTATCTGCTGTTCCCCAGTGTTCACCCACAGAAACAG  750

seq1  TAGATCAGGCTCTGGCTGGGCCCTGGCTATAGCCTGCCTCAGTGAGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGGCTCTGGCTGGGCCCTGGCTATAGCCTGCCTCAGTGAGACCT  800

seq1  CCTATCAGTGCTCAATCAGAGTCTACTTGACAGGACCTGTTAAAGGGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCAGTGCTCAATCAGAGTCTACTTGACAGGACCTGTTAAAGGGACT  850

seq1  CCCTGGGATTTCCCTGGCACCCTGGGGCCAGGCCTTTCAAAAAGAGAAAA  900
      |||||||||||||||||||||||||||||||||||||| ||||||| |||
seq2  CCCTGGGATTTCCCTGGCACCCTGGGGCCAGGCCTTTC-AAAAGAG-AAA  898

seq1  AAGAAGAGTGGCCAGCAGCTCTCTCCTGGCAATACTGACCACAGCTAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGTGGCCAGCAGCTCTCTCCTGGCAATACTGACCACAGCTAAGT  948

seq1  GGTTCGTCGGAATGAAAGCCAATGTCAGTGTGGGCATGAACTCCAGGCTT  1000
      |||||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  GGTTCGTCGG-ATGAAAGCCAATGTCAGTGTGGGCATGAACT-CAGGCTT  996

seq1  CACAATCCATGGTCCC-TTCCACAGTGGGATGCAGAGGACAAAATGC-CC  1048
      ||| |||||||||||| |||||||||||||||||||||| ||||||| ||
seq2  CAC-ATCCATGGTCCCTTTCCACAGTGGGATGCAGAGGAAAAAATGCTCC  1045

seq1  CCCTCCTTTCAATGGAAAGTTCATGAGCCAGGAGCCAGTGGAGGCTGCCT  1098
      |||||||||||||||||||||||||||||||||| ||| | |||||||||
seq2  CCCTCCTTTCAATGGAAAGTTCATGAGCCAGGAG-CAGGGAAGGCTGCCT  1094

seq1  -GGAATAGTCTA--CTCAAAGTGCTATAGCCTTCGATGGAGA--GCTGAC  1143
       |||||||||||   ||||||||||||||||||||| || ||  ||||| 
seq2  GGGAATAGTCTAACTTCAAAGTGCTATAGCCTTCGAGGGGGAAGGCTGAA  1144

seq1  CAACCAACCCTCCAACCCCACAGGACAATGCAC-AGCAATTATG-CTC-A  1190
      ||||||  | |  | |||||||||||||||  | ||||| |||| ||| |
seq2  CAACCA--CTTTAATCCCCACAGGACAATGTGCAAGCAA-TATGTCTCTA  1191

seq1  GGTGCTCTG-AGTGG  1204
      ||||||||| |||||
seq2  GGTGCTCTGAAGTGG  1206

seq1: chr14_26119368_26120286
seq2: B6Ng01-129O20.g_70_992 (reverse)

seq1  CACTGACGCC--TCCAGCAGTGTGCTGTGG-CCAGGGCTGTGCCTCTGAA  47
      ||||||||||   ||||||||||||||||| |||||||||||||||||||
seq2  CACTGACGCCCTCCCAGCAGTGTGCTGTGGCCCAGGGCTGTGCCTCTGAA  50

seq1  GTCTCTCTGGCTTGAAG-AATGGCAAGTCCCCAAGGTGGCATCTTTATCT  96
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTCTCTCTGGCTTGAAGAAATGGCAAGTCCCCAAGGTGGCATCTTTATCT  100

seq1  GAAGCTCACAAGTGGGGCCTGTGCACTGGGGACTAGGCTTACCCTCAAAC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCACAAGTGGGGCCTGTGCACTGGGGACTAGGCTTACCCTCAAAC  150

seq1  ACAGGTGCAAACAGACAGGATGCTGCAGTCCCTGCTCACCAAGTTGCTCT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGCAAACAGACAGGATGCTGCAGTCCCTGCTCACCAAGTTGCTCT  200

seq1  TCTGCCTCTCTCCAGTCACTAGGCTGGCTCAGAAGCTCACTAGCTGGTTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCTCTCCAGTCACTAGGCTGGCTCAGAAGCTCACTAGCTGGTTA  250

seq1  ACTGCAGGGGTACCTATCACCTGCTGCTTGGCTGCAGCTACATCCAACTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGGGGTACCTATCACCTGCTGCTTGGCTGCAGCTACATCCAACTA  300

seq1  CAATGGCCTTGCGGTCTCCCTCTCAGCAGAGTGTAAGCACTATGAAGGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCCTTGCGGTCTCCCTCTCAGCAGAGTGTAAGCACTATGAAGGGA  350

seq1  GCCGTCTCAGCTCTGATTCCCCTCTCAGTCACTCCCACATGGATTGTCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCTCAGCTCTGATTCCCCTCTCAGTCACTCCCACATGGATTGTCAA  400

seq1  CCCAGGCAAACTGCAAGGTGCCAGCTGCGCAGTGGAATTGCCCACATCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCAAACTGCAAGGTGCCAGCTGCGCAGTGGAATTGCCCACATCTC  450

seq1  CATTTACCATCCAGCAGACGAGGTTGGCTGTTGAGCCACCCAAAAGTGGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACCATCCAGCAGACGAGGTTGGCTGTTGAGCCACCCAAAAGTGGC  500

seq1  CCGTCGACTGGGAAATGAATGTTTTGGTTGGTTCAGTTTGTCAATGTGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCGACTGGGAAATGAATGTTTTGGTTGGTTCAGTTTGTCAATGTGCA  550

seq1  TGTTTGCCATTCTAGGCTTGAACTTGGGTCCTTGTCCATGCTGAGCAGGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCCATTCTAGGCTTGAACTTGGGTCCTTGTCCATGCTGAGCAGGG  600

seq1  GCTCTGCCACTGAACTAAGCCCAGCTCAGGATTCACTTCGTATTTTTGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCCACTGAACTAAGCCCAGCTCAGGATTCACTTCGTATTTTTGAA  650

seq1  ACAAGGTCTAGTGAAGTTTCCTGGGATGGACTTAAACTCACTCTGCGGTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTCTAGTGAAGTTTCCTGGGATGGACTTAAACTCACTCTGCGGTC  700

seq1  CACAAAGACTTTGAACTTGCAATCCTCCTGCCTCAGCCTCCTGAGTAACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGACTTTGAACTTGCAATCCTCCTGCCTCAGCCTCCTGAGTAACT  750

seq1  GGGATTTTGGCCTGAGCTACCAGATCTGGTTTAGTTTCATTTCAGCTAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTTGGCCTGAGCTACCAGATCTGGTTTAGTTTCATTTCAGCTAAT  800

seq1  TTAAATTTAAATGGTTGCCAGACTAGACATACCATAGATGGTAAGCGGGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTAAATGGTTGCCAGACTAGACATACCATAGATGGTAAGCGGGA  850

seq1  GGGAGCGGCAGCGTGGGAACAAAGGAGTGGAGGGATGGAGGAGAGAAAGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCGGCAGCGTGGGAACAAAGGAGTGGAGGGATGGAGGAGAGAAAGG  900

seq1  AAAATGAAATAATTAAAGAATTC  919
      |||||||||||||||||||||||
seq2  AAAATGAAATAATTAAAGAATTC  923