BAC Information

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BAC

Clone NameB6Ng01-130B01
Chromosome14 (Build37)
Map Location 110,648,942 - 110,650,004
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130B01.bB6Ng01-130B01.g
ACCDH931475DH931476
length1,1671,065
definitionDH931475|Mus musculus domesticus DNA, BAC clone: B6Ng01-130B01, 5' end.DH931476|Mus musculus domesticus DNA, BAC clone: B6Ng01-130B01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccttttgtcaattctcgatcttacaacacaagccattgctgat
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacaataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattcctccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcggtgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcacaccaagatattttatattat
ttgtgactattgagagggtattgtttccctaatttctttctcagcctgtt
attcttggtataagaaaaggccattgacttgtttgactttattttttatc
cagcgtacttcactcgaagctgttttacacggtttaggagttctctgcgt
gactttaaggcacttaatatcatacatcacttcgcaaagaaattggattc
cctttccaatgtatacc
gaattctttagctctgtacccaacatttaataggattatttgattctctg
gattttacctttttgggttctttgtatatattggatatattagacattat
tagatgcaagattggtaaagatcttttccaacatttgactattaaagaat
tcagatgggctttatattttagggtgacttagacgatgttgcatgccaaa
atcataatgttagagaaagtgaatacttaattttctcctgtttgaaatgg
atatgattgttactgaaaattctttcactgctatcaagaaggaaaattct
aaagtgttttttttttgtcaaaaaaaaagtaaagcaactaaattatctaa
gcaaatacagtacattgaagtatcaaatatttcagaaaacaatgtatctt
ctggaccacttttttatacgttaaaacaccataaagttaaagagatattg
tgatattataaaaacgtatgagtgaaaatcgtgcattttttttaatttga
gaagaaggcaaagatagatattcactatgctttcttttataaggcttcac
tttattaactttttaatcatgtcattttgtccttctacctttaccaataa
ttaattttcaatcacatgaaaaaattcattgggtaattttttaaaaaaaa
aatgaagaaagctattatctaagaatcaaaatttgcttgacccaaatact
attgttaaattatttaagttttttctctagtatttctattttgtacaaag
gaaataaaactgatgaaagcgaataaatgtagaaaagaaaattgagaaga
tatttgtttttgtttttgtttttttttaaaaaaaatctggtatgctgata
ttatgaaaagtccaggttacaaccagcccttgctgtcagctccatcactg
ggtcaccttgggcacagagtcacagaacaactccacggtcctttaaagag
accttgatgaaatggaacaaattttctagagaagataccatgtaccaaag
ttaaatccagatcagattattgacttaaaccgttcctatattccttagaa
atagaaccgccataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110648942_110650004
seq2: B6Ng01-130B01.g_70_1134

seq1  GAATTCTTTAGCTCTGTACCCAACATTTAATAGGATTATTTGATTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGCTCTGTACCCAACATTTAATAGGATTATTTGATTCTCTG  50

seq1  GATTTTACCTTTTTGGGTTCTTTGTATATATTGGATATATTAGACATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTACCTTTTTGGGTTCTTTGTATATATTGGATATATTAGACATTAT  100

seq1  TAGATGCAAGATTGGTAAAGATCTTTTCCAACATTTGACTATTAAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAAGATTGGTAAAGATCTTTTCCAACATTTGACTATTAAAGAAT  150

seq1  TCAGATGGGCTTTATATTTTAGGGTGACTTAGACGATGTTGCATGCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGGCTTTATATTTTAGGGTGACTTAGACGATGTTGCATGCCAAA  200

seq1  ATCATAATGTTAGAGAAAGTGAATACTTAATTTTCTCCTGTTTGAAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATGTTAGAGAAAGTGAATACTTAATTTTCTCCTGTTTGAAATGG  250

seq1  ATATGATTGTTACTGAAAATTCTTTCACTGCTATCAAGAAGGAAAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTGTTACTGAAAATTCTTTCACTGCTATCAAGAAGGAAAATTCT  300

seq1  AAAGTGTTTTTTTTTTGTCAAAAAAAAAGTAAAGCAACTAAATTATCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTTTTTTTTTGTCAAAAAAAAAGTAAAGCAACTAAATTATCTAA  350

seq1  GCAAATACAGTACATTGAAGTATCAAATATTTCAGAAAACAATGTATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATACAGTACATTGAAGTATCAAATATTTCAGAAAACAATGTATCTT  400

seq1  CTGGACCACTTTTTTATACGTTAAAACACCATAAAGTTAAAGAGATATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACCACTTTTTTATACGTTAAAACACCATAAAGTTAAAGAGATATTG  450

seq1  TGATATTATAAAAACGTATGAGTGAAAATCGTGCATTTTTTTTAATTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTATAAAAACGTATGAGTGAAAATCGTGCATTTTTTTTAATTTGA  500

seq1  GAAGAAGGCAAAGATAGATATTCACTATGCTTTCTTTTATAAGGCTTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGCAAAGATAGATATTCACTATGCTTTCTTTTATAAGGCTTCAC  550

seq1  TTTATTAACTTTTTAATCATGTCATTTTGTCCTTCTACCTTTACCAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAACTTTTTAATCATGTCATTTTGTCCTTCTACCTTTACCAATAA  600

seq1  TTAATTTTCAATCACATGAAAAAATTCATTGGGTAATTTTTTAAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTCAATCACATGAAAAAATTCATTGGGTAATTTTTTAAAAAAAA  650

seq1  AATGAAGAAAGCTATTATCTAAGAATCAAAATTTGCTTGACCCAAATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGAAAGCTATTATCTAAGAATCAAAATTTGCTTGACCCAAATACT  700

seq1  ATTGTTAAATTATTTAAGTTTTTTCTCTAGTATTTCTATTTTGTACAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAAATTATTTAAGTTTTTTCTCTAGTATTTCTATTTTGTACAAAG  750

seq1  GAAATAAAACTGATGAAAGCGAATAAATGTAGAAAAGAAAA-TGAGAAGA  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAAATAAAACTGATGAAAGCGAATAAATGTAGAAAAGAAAATTGAGAAGA  800

seq1  TATTTGTTTTTGTTTTTGTTTTTTTTTAAAAAAAATCTGGTATGCTGATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTTTGTTTTTGTTTTTTTTTAAAAAAAATCTGGTATGCTGATA  850

seq1  TTATGAAAAGTCCAGGTTACAACCAGCCCTTGCTGTCAGCTCCATCACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAAAGTCCAGGTTACAACCAGCCCTTGCTGTCAGCTCCATCACTG  900

seq1  GGTCACCTTGGGCACAGAGTCCACAG-ACAACTCCACGGTCCTTAGAGGA  948
      |||||||||||||||||||| ||||| |||||||||||||||||  | ||
seq2  GGTCACCTTGGGCACAGAGT-CACAGAACAACTCCACGGTCCTTTAAAGA  949

seq1  GACCTTGATGAAATGG-ACAAA-TTTCTAGAG-AGATACCATGTACCAAA  995
      |||||||||||||||| ||||| ||||||||| |||||||||||||||||
seq2  GACCTTGATGAAATGGAACAAATTTTCTAGAGAAGATACCATGTACCAAA  999

seq1  GTTAAATCAGGATCAGATTAATGACTTAAACAG-TCCTATATTCCCTAAA  1044
      ||||||||  |||||||||| |||||||||| | ||||||||||| |  |
seq2  GTTAAATCCAGATCAGATTATTGACTTAAACCGTTCCTATATTCCTT--A  1047

seq1  GAAATAGAAGCAGCCATAA  1063
      ||||||||| | |||||||
seq2  GAAATAGAA-CCGCCATAA  1065