BAC Information

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BAC

Clone NameB6Ng01-130I12
Chromosome14 (Build37)
Map Location 81,772,134 - 81,773,210
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672828, LOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130I12.bB6Ng01-130I12.g
ACCDH931820DH931821
length1,1881,034
definitionDH931820|Mus musculus domesticus DNA, BAC clone: B6Ng01-130I12, 5' end.DH931821|Mus musculus domesticus DNA, BAC clone: B6Ng01-130I12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaaacaaaacaaccctgagat
tccatctcacaacagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccattctggaaatcagtctggcagttgctca
gaaaactgtacatactactactggaggatccctcaatatcactcctgggc
atatatccagaaaatgtcccaacaggtaagaagaacacatgcttcactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
aagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctagagggcatcatcctgagtgaggtaacacaatcacaaa
gaactcaaatgatatgtactcactgataagtggatattagcccagaaacc
taatatacccgagatataagatacaatttgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacacttttccccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagagatccatcccataatta
gcctccaagcgatgacaccattacatacactagcaagattttgctgaaag
gaccctcatatagctgtctcttgtgagattaggcccgggccctagcaaac
acataagtagatgctcacagtcagctattgaatggagcacagggccccca
atggaggagctagagaagtatccagagctaaagagatctgcaattctgta
ggtgcacaacattatgactaccagtatccggagcttcttgactcttagct
gcatatgtattcaaaaggatggcctaggtcggccatctatggaagaagag
gcccatgaacatgccactttatatgggctcagtaacaggggagtgcaagg
gccaaatgggaatgggtgtggtaggggagacgaggggg
gaattccctgccaaatgtgattatgaaaggcattcttggttactgtcttg
agacaatgtgagccatcaagtggcacaaacatatggagaactgtcaatct
tgtgagtaattatctaatgtgtcagatattataaagagtcttaaaactat
ttgtatgtgttgagaagcataaccatttcactaaatattgatagttaatg
agggaccatgcagaatttctcagataccacatgtcaattgtcttctataa
ataattattaatgtggatattaaggcaaaaaattatcttttatttccttt
tgatattaaaaaaacaggtggcacatgcctttaatcccagcacccaggag
gcagaggcaggcagatttctgagttcaagaccagcctggttgtcttagtt
agggttttactgctgtgaacagacaccatgaccaaggcaaaggcaagtct
tataaaaaacaacatttaattggggctggcttacaggttcagaggttcag
tccattatcatcaaggtgggagcatggcagtatccaggcaggcatggtgc
agaggagctgagagttctatgtcttcatccaaaggctgccagtggaagac
tgacttccaggcaactagggtgaagatcttatacccacacccacagtgac
acacccattccaaccaggtcacacctatttcaacaaggccacaccttcag
atggtgccatgccctggtacaaggatatacgaaccgtcacactggtctac
aaagtgagtccaagacagccagggctacacagagaaaccctgtatctgaa
acacaacaaaacgaacaaacaacaacacatacatatagtgatttatcttc
tggtgacgtagaaagattgtgctagacacagcttgaataagtgtagcttg
taatttgaccttgcaaaacttgttccttcacgcgaatgtctagtcggttc
agcttgataacttgacaagacaaaccatgctgtagtagtggatgaggaaa
gaagagatactgaatcttacaagtcttggatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81772134_81773210
seq2: B6Ng01-130I12.g_67_1100

seq1  GAATTCCATGCCAAATGTGATTATGAAAGGCATTCTTGGTTACTGTCTTG  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCCAAATGTGATTATGAAAGGCATTCTTGGTTACTGTCTTG  50

seq1  AGACAATGTGAGCCATCAAGTGGCACAAACATATGGAGAACTGTCAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGTGAGCCATCAAGTGGCACAAACATATGGAGAACTGTCAATCT  100

seq1  TGTGAGTAATTATCTAATGTGTCAGATATTATAAAGAGTCTTAAAACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTAATTATCTAATGTGTCAGATATTATAAAGAGTCTTAAAACTAT  150

seq1  TTGTATGTGTTGAGAAGCATAACCATTTCACTAAATATTGATAGTTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTGTTGAGAAGCATAACCATTTCACTAAATATTGATAGTTAATG  200

seq1  AGGGACCATGCAGAATTTCTCAGATACCACATGTCAATTGTCTTCTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCATGCAGAATTTCTCAGATACCACATGTCAATTGTCTTCTATAA  250

seq1  ATAATTATTAATGTGGATATTAAGGCAAAAAATTATCTTTTATTTCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTAATGTGGATATTAAGGCAAAAAATTATCTTTTATTTCCTTT  300

seq1  TGATATTAAAAAAACAGGTGGCACATGCCTTTAATCCCAGCACCCAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTAAAAAAACAGGTGGCACATGCCTTTAATCCCAGCACCCAGGAG  350

seq1  GCAGAGGCAGGCAGATTTCTGAGTTCAAGACCAGCCTGGTTGTCTTAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGCAGATTTCTGAGTTCAAGACCAGCCTGGTTGTCTTAGTT  400

seq1  AGGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCAAAGGCAAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCAAAGGCAAGTCT  450

seq1  TATAAAAAACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAG  500

seq1  TCCATTATCATCAAGGTGGGAGCATGGCAGTATCCAGGCAGGCATGGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATCATCAAGGTGGGAGCATGGCAGTATCCAGGCAGGCATGGTGC  550

seq1  AGGAGGAGCTGAGAGTTCTATGTCTTCATCCAAAGGCTGCCAGTGGAAGA  600
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GAGGAGCTGAGAGTTCTATGTCTTCATCCAAAGGCTGCCAGTGGAAGA  599

seq1  CTGACTTCCAGGCAACTAGGGTGAAGATCTTATACCCACACCCACAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTCCAGGCAACTAGGGTGAAGATCTTATACCCACACCCACAGTGA  649

seq1  CACACCCATTCCAACCAGGTCACACCTATTCCAACAAGGCCACACCTTCA  700
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CACACCCATTCCAACCAGGTCACACCTATTTCAACAAGGCCACACCTTCA  699

seq1  GATGGTGCCATGCCCTGGTACAAGGATATACGAACCGTCACACTGGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGCCATGCCCTGGTACAAGGATATACGAACCGTCACACTGGTCTA  749

seq1  CAAAGTGAGTCCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTATCAG  800
      |||||||||| ||| ||||||||||||||||||||||||||||||||| |
seq2  CAAAGTGAGT-CCAAGACAGCCAGGGCTACACAGAGAAACCCTGTATCTG  798

seq1  AAAACAAAAACAAAAACAAAACAAACAAACAAACAAACAAACAAAATAGG  850
      |||         | |||||||| |||||||||  | ||| || | ||| |
seq2  AAA--------CACAACAAAACGAACAAACAACAACACATAC-ATATA-G  838

seq1  TGATTTTATCTTCCTGGTGGAGGTAAGAAAAGGAGTTGTTGCTAGGACAG  900
      ||| |||||||| ||||| || || |||||  || ||| ||||| |||| 
seq2  TGA-TTTATCTT-CTGGT-GACGT-AGAAA--GA-TTG-TGCTA-GACA-  878

seq1  CAGCCTGGAGTAAGCTGTGAGCCTGGGAATTTTGACCTTGCAAGAACTTG  950
      ||| || || |||| ||| ||| |  | | ||||||||||||| ||||||
seq2  CAG-CTTGAATAAG-TGT-AGCTT--GTAATTTGACCTTGCAA-AACTTG  922

seq1  TTCCTTCAACAGCG-GAGTTGCTAAGCTGGGTACAAGCCTGGATAACTGG  999
      ||||||||    || || |  |||   | ||| ||   || ||||||| |
seq2  TTCCTTCA----CGCGAATGTCTA--GTCGGTTCA--GCTTGATAACTTG  964

seq1  CAGAGGACAAACCCATGGCTGTAAGTAGTTGGATGAGAAAAGAAGAGATA  1049
       | | |||||| |||| ||||| ||||| |||||||| ||||||||||||
seq2  -ACAAGACAAA-CCAT-GCTGT-AGTAG-TGGATGAGGAAAGAAGAGATA  1009

seq1  CTGAGATCTAAACAGAGTCTTGAATGAA  1077
      |||| ||||  ||| ||||||| |||||
seq2  CTGA-ATCT-TACA-AGTCTTGGATGAA  1034