BAC Information

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BAC

Clone NameB6Ng01-131C17
Chromosome14 (Build37)
Map Location 100,316,844 - 100,318,028
singlet/doubletsinglet
Overlap geneKlf12
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneLOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131C17.bB6Ng01-131C17.g
ACCDH932295DH932296
length1,1961,035
definitionDH932295|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C17, 5' end.DH932296|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactaggttgaccaggttggcctcggactccaagatctgcttgtc
tctctctcccaagtgatagacatgtgctaccactgtctacaaccttggtg
ttgaaatcagactgtaagccggtgacatcaatgactacacttgccagata
caagaaacaccctcataaataaaatcaagattatttaattttcttcaatt
gatgataaagataagtctcagtctgtaactgtgggtgttgttgttgtttg
cattaaaaagagagaagcacacattgttctatagaatttcaaaataagtc
tcaggagaacatgactatgtatgcaaagcactatcaataacaaaagtaat
acagaaaccaagtaggatgatcatacatagtctattaaagggtgtgtatg
tgtgtgtgtgtgtgtgtgtccccagagtggtcagttaccctaacagggct
ttatggttgagacattctgaagactgaagtccatattaaaatcatccaag
gtgactttctatcaacttccattcataactcttttccttgtgaactatgg
tctgcttgcatttgtttcaaggaagaaagtctgtggtcaagtgcctggtg
catcagcccgatagcctatatcctgttgactcttggccttggtgcttctg
tttatcatctgtgaaatgaaataaatccatggacttgtctgaaaagattg
tggtaaggattaaactagctaccctgtgccaagcattaaaggcagtgcac
gagggccttgggatgtgaatatattaagacactgttgtctagctcatggg
aaatggccggaagtgctcacatgcaattcagctttaagaacaaatgtcat
acagtccacctgagatgtagacctccagctacaaactcaagagcttaaag
agcttcatgtctcttagaaggtggaagtcactgttgtgaacaaagattag
agtgtcaaaccaccactttgtccctggtcacattcatagatttcacgtta
gaagccaaagtgtgtcagaggcttattaaataggaccaattggaagctac
taagctgccttttaaggtcttgcatggggtactgggaggatcttgaacaa
actgggaaatattatttcggccacacaaagtgaagtgtaaattccactgt
ttctcccctctcccaggacacgatcacatatatggtcagtataggc
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtctgagaagctctgtggctcttgtccggaaggaggccggccg
tctggagctgaggatggcgccgcccagaagctctgcgactctcgcccgtc
ctagaaacggctggcactctgtattccacacggtcacccgtgcagcctgc
cctccgcggagtcccggagccaagaaggctcccgccggcgcctgtgccac
aaacctctcaggccgggcagacccccgttctctcaccaggaaggtggccg
gctgtctggagctgaagatggcgccgcccagaagctctgcgactctcgcc
cgtcccagaaacggctggcactctgtattccacacggtcacccgtgcagc
ctgccctccgcggagtcccggagcctagacggctcccgccggcgcctgtg
ccacaaacctctcagccgggcagacccccgtgctctcaccaggaaggtgg
ccggttgtctggagctgagatggcgccgccagaagctctgctgctctcgc
ccgtccagaaacgctggcattctgtatccaccgtccactgtgcagcctgg
cctccgcggaatccgggaccagtagggtcccgcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100316844_100318028
seq2: B6Ng01-131C17.b_47_1242

seq1  GAATTCACTAGGTTGACCAGGTTGGCCTCGGACTCCAAGATCTGCTTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGGTTGACCAGGTTGGCCTCGGACTCCAAGATCTGCTTGTC  50

seq1  TCTCTCTCCCAAGTGATAGACATGTGCTACCACTGTCTACAACCTTGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCCCAAGTGATAGACATGTGCTACCACTGTCTACAACCTTGGTG  100

seq1  TTGAAATCAGACTGTAAGCCGGTGACATCAATGACTACACTTGCCAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCAGACTGTAAGCCGGTGACATCAATGACTACACTTGCCAGATA  150

seq1  CAAGAAACACCCTCATAAATAAAATCAAGATTATTTAATTTTCTTCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAACACCCTCATAAATAAAATCAAGATTATTTAATTTTCTTCAATT  200

seq1  GATGATAAAGATAAGTCTCAGTCTGTAACTGTGGGTGTTGTTGTTGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAAAGATAAGTCTCAGTCTGTAACTGTGGGTGTTGTTGTTGTTTG  250

seq1  CATTAAAAAGAGAGAAGCACACATTGTTCTATAGAATTTCAAAATAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAAGAGAGAAGCACACATTGTTCTATAGAATTTCAAAATAAGTC  300

seq1  TCAGGAGAACATGACTATGTATGCAAAGCACTATCAATAACAAAAGTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGAACATGACTATGTATGCAAAGCACTATCAATAACAAAAGTAAT  350

seq1  ACAGAAACCAAGTAGGATGATCATACATAGTCTATTAAAGGGTGTGTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACCAAGTAGGATGATCATACATAGTCTATTAAAGGGTGTGTATG  400

seq1  TGTGTGTGTGTGTGTGTGTCCCCAGAGTGGTCAGTTACCCTAACAGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTCCCCAGAGTGGTCAGTTACCCTAACAGGGCT  450

seq1  TTATGGTTGAGACATTCTGAAGACTGAAGTCCATATTAAAATCATCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTTGAGACATTCTGAAGACTGAAGTCCATATTAAAATCATCCAAG  500

seq1  GTGACTTTCTATCAACTTCCATTCATAACTCTTTTCCTTGTGAACTATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTCTATCAACTTCCATTCATAACTCTTTTCCTTGTGAACTATGG  550

seq1  TCTGCTTGCATTTGTTTCAAGGAAGAAAGTCTGTGGTCAAGTGCCTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTGCATTTGTTTCAAGGAAGAAAGTCTGTGGTCAAGTGCCTGGTG  600

seq1  CATCAGCCCGATAGCCTATATCCTGTTGACTCTTGGCCTTGGTGCTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCCCGATAGCCTATATCCTGTTGACTCTTGGCCTTGGTGCTTCTG  650

seq1  TTTATCATCTGTGAAATGAAATAAATCCATGGACTTGTCTGAAAAGATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATCTGTGAAATGAAATAAATCCATGGACTTGTCTGAAAAGATTG  700

seq1  TGGTAAGGATTAAACTAGCTACCCTGTGCCAAGCATTAAAGGCAGTGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGGATTAAACTAGCTACCCTGTGCCAAGCATTAAAGGCAGTGCAC  750

seq1  GAGGGCCTTGGGATGTGAATATATTAAGACACTGTTGTCTAGCTCATGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCTTGGGATGTGAATATATTAAGACACTGTTGTCTAGCTCATGGG  800

seq1  AAATGGCCGGAAGTGCTCACATGCAATTCAGCTTTAAGAACAAATGTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCCGGAAGTGCTCACATGCAATTCAGCTTTAAGAACAAATGTCAT  850

seq1  ACAGTCCACCTGAGATGTAGACCTCCAGCTACAAACTCAAGAGCTTAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCACCTGAGATGTAGACCTCCAGCTACAAACTCAAGAGCTTAAAG  900

seq1  AGCTTCATGTCTCTTAGAAGGTTGGAAGTCACTGTTGTGGAACAAAGATT  950
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  AGCTTCATGTCTCTTAGAAGG-TGGAAGTCACTGTTGT-GAACAAAGATT  948

seq1  AGAGTGTCAAACCACCACTTTGTCCCTGGTCACATTCATAGATCTCACGT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGAGTGTCAAACCACCACTTTGTCCCTGGTCACATTCATAGATTTCACGT  998

seq1  TAG-AGCCAAAGTGTGTCAGAGGCCTATTACATAGACCAAATTGGAAGCT  1049
      ||| |||||||||||||||||||| ||||| ||||  | |||||||||||
seq2  TAGAAGCCAAAGTGTGTCAGAGGCTTATTAAATAGGACCAATTGGAAGCT  1048

seq1  ACTAAGCTGCCTTTTAAGGTC-TGCAT-GGGTACT-GGAGTACCTTG-AC  1095
      ||||||||||||||||||||| ||||| ||||||| |||| | |||| ||
seq2  ACTAAGCTGCCTTTTAAGGTCTTGCATGGGGTACTGGGAGGATCTTGAAC  1098

seq1  AAACTGG--AATATTA-TTCAGCAACACAAAGTGAA--GTAAATCTCACT  1140
      |||||||  ||||||| ||| || ||||||||||||  ||||||  ||||
seq2  AAACTGGGAAATATTATTTCGGCCACACAAAGTGAAGTGTAAATTCCACT  1148

seq1  GTTTCT-CCCTCT-CCAGGACAACATCAC-TATATGGGTCAGT-TAGGC  1185
      |||||| |||||| ||||||||  ||||| ||||| ||||||| |||||
seq2  GTTTCTCCCCTCTCCCAGGACACGATCACATATAT-GGTCAGTATAGGC  1196