BAC Information

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BAC

Clone NameB6Ng01-131H16
Chromosome14 (Build37)
Map Location 71,108,307 - 71,271,580
singlet/doubletdoublet
Overlap geneXpo7, LOC668443, Dok2
Upstream geneR3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2
Downstream geneGfra2, LOC100043132, LOC100043136, LOC668477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131H16.bB6Ng01-131H16.g
ACCDH932526DH932527
length803450
definitionDH932526|Mus musculus domesticus DNA, BAC clone: B6Ng01-131H16, 5' end.DH932527|Mus musculus domesticus DNA, BAC clone: B6Ng01-131H16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,108,307 - 71,109,109)(71,271,125 - 71,271,580)
sequence
gaattcctattttattaaacatgattaataaattcctaccattaagtaaa
aggcgacaaagatagatactttgcatccgtcagcatcactccagaaaacc
ctcaaaatgtaaaacactgtctatcattctcaaaaaagaataaggaaaac
tgtctcgggactacagcgaggctcacgtgtttctcctgactgccagctac
ttcttaatagcctcagcttcagagcagaggaatctgtagcttttcaagtc
tgaagttctgtgagaacgacctgattcacccacttcatatggcttacaaa
catggaattagaagagaaatctaactgtatgtaactcacaaaaatgtatc
caggaactccctatgtacactatgttggccttgaatttatagagacccac
ctgcccaaacacttgggaagcagaggcaggtggatctctgtaaattcaag
gtcagcatagtgtacacagggagttcctggatagatatgtttttgtggga
tatatacagtcagatgagtaagactggtaatgtattctcagctcaggaaa
caagactgtttcaaaacagcaaaataaaccgaaccttacacagcctgacc
tgatgatactgttattctcttctctctgtctctcccccaccacccccaca
gttaccagataggaaagtatattttctgtttctaaaactgtcatgtctat
agttcacaaagcaacttctctctagtgccactaaaacaaaagcacattta
caaatagaaggtgatcttcaaactaactagtaaagtattgctttagtaca
aga
tgtggtcctactatccacactgactgtgccactgctgtctcacctctgta
ttcttctgtgatgagcacaggtaccccaaagcaaaacccataccaactcc
atccataacactctggactttgagtgtggaaatgtccctcaacacacaat
ccatttctattcccacaacaggtctctagcttgggtatggtcagcctgct
tttttttttctttttttacttctccctctaattgaagaatgagcctccca
tgatcctctagcaagtctctccttttccctggcagaattctttctgggca
ttcactgccaagagagatcaaaatataccagcacatgataccaactcctt
ggccttctaagcattcataacagctgggccttgggacaatatgacccagc
aggtctcagctagaactaagaggaacggaagtgtcaagggagctgtcacg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_71108307_71109109
seq2: B6Ng01-131H16.b_44_846

seq1  GAATTCCTATTTTATTAAACATGATTAATAAATTCCTACCATTAAGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTTTATTAAACATGATTAATAAATTCCTACCATTAAGTAAA  50

seq1  AGGCGACAAAGATAGATACTTTGCATCCGTCAGCATCACTCCAGAAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGACAAAGATAGATACTTTGCATCCGTCAGCATCACTCCAGAAAACC  100

seq1  CTCAAAATGTAAAACACTGTCTATCATTCTCAAAAAAGAATAAGGAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATGTAAAACACTGTCTATCATTCTCAAAAAAGAATAAGGAAAAC  150

seq1  TGTCTCGGGACTACAGCGAGGCTCACGTGTTTCTCCTGACTGCCAGCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCGGGACTACAGCGAGGCTCACGTGTTTCTCCTGACTGCCAGCTAC  200

seq1  TTCTTAATAGCCTCAGCTTCAGAGCAGAGGAATCTGTAGCTTTTCAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATAGCCTCAGCTTCAGAGCAGAGGAATCTGTAGCTTTTCAAGTC  250

seq1  TGAAGTTCTGTGAGAACGACCTGATTCACCCACTTCATATGGCTTACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTCTGTGAGAACGACCTGATTCACCCACTTCATATGGCTTACAAA  300

seq1  CATGGAATTAGAAGAGAAATCTAACTGTATGTAACTCACAAAAATGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATTAGAAGAGAAATCTAACTGTATGTAACTCACAAAAATGTATC  350

seq1  CAGGAACTCCCTATGTACACTATGTTGGCCTTGAATTTATAGAGACCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACTCCCTATGTACACTATGTTGGCCTTGAATTTATAGAGACCCAC  400

seq1  CTGCCCAAACACTTGGGAAGCAGAGGCAGGTGGATCTCTGTAAATTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAAACACTTGGGAAGCAGAGGCAGGTGGATCTCTGTAAATTCAAG  450

seq1  GTCAGCATAGTGTACACAGGGAGTTCCTGGATAGATATGTTTTTGTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCATAGTGTACACAGGGAGTTCCTGGATAGATATGTTTTTGTGGGA  500

seq1  TATATACAGTCAGATGAGTAAGACTGGTAATGTATTCTCAGCTCAGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAGTCAGATGAGTAAGACTGGTAATGTATTCTCAGCTCAGGAAA  550

seq1  CAAGACTGTTTCAAAACAGCAAAATAAACCGAACCTTACACAGCCTGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTGTTTCAAAACAGCAAAATAAACCGAACCTTACACAGCCTGACC  600

seq1  TGATGATACTGTTATTCTCTTCTCTCTGTCTCTCCCCCACCACCCCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATACTGTTATTCTCTTCTCTCTGTCTCTCCCCCACCACCCCCACA  650

seq1  GTTACCAGATAGGAAAGTATATTTTCTGTTTCTAAAACTGTCATGTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAGATAGGAAAGTATATTTTCTGTTTCTAAAACTGTCATGTCTAT  700

seq1  AGTTCACAAAGCAACTTCTCCCTAGTGCCACTAAAACAAAAGCACATTTA  750
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGTTCACAAAGCAACTTCTCTCTAGTGCCACTAAAACAAAAGCACATTTA  750

seq1  CAAATAGAAGGTGATCTTCAAACTAACTAGCAAAGTATTGCTTTAGTACA  800
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAAATAGAAGGTGATCTTCAAACTAACTAGTAAAGTATTGCTTTAGTACA  800

seq1  AGA  803
      |||
seq2  AGA  803

seq1: chr14_71271125_71271580
seq2: B6Ng01-131H16.g_68_523 (reverse)

seq1  CGTGACAGCTCCCTTGACACTTCCGTTCCTCTTAGTTCTAGCTGAGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGACAGCTCCCTTGACACTTCCGTTCCTCTTAGTTCTAGCTGAGACCT  50

seq1  GCTGGGTCCTATTGTCCCAAGGCCCAGCTGTTATGAATGCTTAGAAGGCC  100
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTCATATTGTCCCAAGGCCCAGCTGTTATGAATGCTTAGAAGGCC  100

seq1  AAGGAGTTGGTATCATGTGCTGGTATATTTTGATCTCTCTTGGCAGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTTGGTATCATGTGCTGGTATATTTTGATCTCTCTTGGCAGTGAA  150

seq1  TGCCCAGAAAGAATTCTGCCAGGGAAAAGGAGAGACTTGCTAGAGGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGAAAGAATTCTGCCAGGGAAAAGGAGAGACTTGCTAGAGGATCA  200

seq1  TGGGAGGCTCATTCTTCAATTAGAGGGAGAAGTAAAAAAAGAAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCTCATTCTTCAATTAGAGGGAGAAGTAAAAAAAGAAAAAAAAA  250

seq1  AGCAGGCTGACCATACCCAAGCTAGAGACCTGTTGTGGGAATAGAAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTGACCATACCCAAGCTAGAGACCTGTTGTGGGAATAGAAATGG  300

seq1  ATTGTGTGTTGAGGGACATTTCCACACTCAAAGTCCAGAGTGTTATGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTGTTGAGGGACATTTCCACACTCAAAGTCCAGAGTGTTATGGAT  350

seq1  GGAGTTGGTATGGGTTTTGCTTTGGGGTACCTGTGCTCATCACAGAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGGTATGGGTTTTGCTTTGGGGTACCTGTGCTCATCACAGAAGAA  400

seq1  TGCAGAGGTGAGACAGCAGTGGCACAGTCAGTGTGGATAGTTGGGCCACA  450
      | ||||||||||||||||||||||||||||||||||||||| || |||||
seq2  TACAGAGGTGAGACAGCAGTGGCACAGTCAGTGTGGATAGTAGGACCACA  450

seq1  GAATTC  456
      ||||||
seq2  GAATTC  456