BAC Information

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BAC

Clone NameB6Ng01-131O07
Chromosome14 (Build37)1 (Build37)
Map Location 80,499,514 - 80,500,030120,530,128 - 120,531,124
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene1300010F03Rik, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131O07.bB6Ng01-131O07.g
ACCDH932836DH932837
length911989
definitionDH932836|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O07, 5' end.DH932837|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(80,499,514 - 80,500,030)(120,530,128 - 120,531,124)
sequence
gaattctcaactgaggaataccaaatggctgagaagcacctaaaaaaatg
ttcaacgactatagtcatcagggaaatgcaaatcaaaacaaccctgagat
tgtacctcacaccagtcagaatggctaaaataaaaaatgcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgctggtg
ggattgcaaggtggtacaaccactctggaaattagtttggcggttcctca
gaaaattggacatagtactaccggaagatcaccactcctgggcatatacc
cagaagatgttccaactggtaataaggacacatgctccacatagcagcct
tatttataatagccagaagctggaacaaacccagatatccctcaacagag
gaatggatacagaaaatgtggtacatttttacaatggagtactacacagc
tattaaaaacaatgaatttatgaaattcttagacaaatgggtggatctgg
aggatatcatcctgagtgaggtaacccaatcacaaaagaacacacataaa
atgcactcactgataagtggatattagcccagaagctcagaatacccaag
atacaatttgcaaaacacatgaaactcaagaagaaggaagaccaaagcat
gcctggctttttgtgtgagttctgggcttcaaactcaggtcttcatgctt
gagatgggagcactgtactgagggaatgtgctcccagcccccaacctgtc
ctttttctcacgctcttacagaacattgcctctgcaatggccaacgtgag
tgctgtaagatctcactgggtgtgaccacaggtcatgtggtctgtacctg
cctgccccatcacactcagagcagaccatgatctatgcactcactctctg
tcacttcctct
gaattcaggtcaccgacttggttggcagcaggtgtctctgcccagccaac
catctcaccaccccatgttcccctttttgaatgtttcatttgtcagacac
cccagcggtaccctggtggatagagctttgttggtgtctgttctgatgat
gagactgtatttagcactgtctcctggactgccgcataatccagccagtg
ccactggttgctctgctaggggttggaatctgggaggggcagcctccttt
ctgtagaattgcctgttagatttgaccttgcccatgtccagaactcataa
aaaatggaagtggctgatctacctctgtgtggaatccgtccttgctatcc
tgtccctgaggaaggcactgctcacctatgtgggctgcacacttactact
cctgtagtagcttggtggccattgatggcagcaggtgacaagccaactgg
aagcagtcccttgtgtttgcacagtggcttctgtcgttgtgctttcttac
ttgttgaaggttaaatgctctgagcagtctctctccttgccggtcccctc
atcattccatcactcttcccctagccccttcccgattcttgcttaatatt
gagagggaagaaatgagaccactgaactgatgtgggttttgtttggggcc
atgttccacgtgagcactgtgaggtgttgttgctgaacagggacactgtg
tctgtccccttccccatcttaaggctttcttttggttgtgtttgccatgc
ccctccgctgtgattagccagtgttagaaggtgtttactagcatatgagg
tcttactaacacgtttaaaagaacatcctcttttccatcataagaacatc
ctcttctccatcataaatgttaaaagagagaaagggcccactctgaggtc
catccatctgctttctaacttagtatattccctttggatatttataaatt
attttttcaatgaaggtgaacccttgcccgaagaagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80499514_80500030
seq2: B6Ng01-131O07.b_199_694 (reverse)

seq1  CTTTGGTCTTCGTTCTTCTTGAGTTTCATATGTTTTGCAAGTTGTAACTT  50
      ||||||||||| ||||||||||||||||| |||||||||| |||||    
seq2  CTTTGGTCTTCCTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTA----  46

seq1  ATGTCTTGGTTATTCTAAGTTTCTGGGCTAATATCCACTTATCAATGAGT  100
         |||||| |||||| || |||||||||||||||||||||||| |||||
seq2  ---TCTTGGGTATTCTGAGCTTCTGGGCTAATATCCACTTATCAGTGAGT  93

seq1  ACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATGATA  150
       ||| | ||||| |||||||||||||||||||||||||||||||||||||
seq2  GCATTTTATGTGTGTTCTTTTGTGATTGGGTTACCTCACTCAGGATGATA  143

seq1  CCCTCCAGATCCATCTATTTGCCTAGGAATTTCATAAATTCATTCTTTTT  200
       |||||||||||| | ||||| ||| |||||||||||||||||| |||||
seq2  TCCTCCAGATCCACCCATTTGTCTAAGAATTTCATAAATTCATTGTTTTT  193

seq1  AATAGCTGAGTATTACTCCATTGTGTAAATGTACCACATTTTTTGTATCC  250
      |||||||| ||| |||||||||||  |||||||||||||||| |||||||
seq2  AATAGCTGTGTAGTACTCCATTGTAAAAATGTACCACATTTTCTGTATCC  243

seq1  ATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATA  300
      ||||||||||||||||  |||||||||  |||||||||||||||||||||
seq2  ATTCCTCTGTTGAGGGATATCTGGGTTTGTTCCAGCTTCTGGCTATTATA  293

seq1  AATAAGGCTGCTATGAACATAGTGGAGCATGTTTCCTTCTTATCGGTTGG  350
      ||||||||||||||       ||||||||||| ||||| ||| | |||||
seq2  AATAAGGCTGCTAT-------GTGGAGCATGTGTCCTTATTACCAGTTGG  336

seq1  AACATCTTCTGGATATATGCCCAGGAGAGGTATTGTGGGATCCTCTGGTA  400
      |||||||||||| |||||||||||||| |||       |||| || ||||
seq2  AACATCTTCTGGGTATATGCCCAGGAGTGGT-------GATCTTCCGGTA  379

seq1  GTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGGT  450
      |||||||||||||||||||||||||| |||| ||| ||||||||||||||
seq2  GTACTATGTCCAATTTTCTGAGGAACCGCCAAACTAATTTCCAGAGTGGT  429

seq1  TGTACAAGCTTGCAATCCCACCAATAATGGAGGAGTGTTCCTCTTTCTCC  500
      ||||| | |||||||||||||||  |||||||||||||||||||||||||
seq2  TGTACCACCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCC  479

seq1  ACATCCTCACCAGCATC  517
      |||||||  ||||||||
seq2  ACATCCTTGCCAGCATC  496

seq1: chr1_120530128_120531124
seq2: B6Ng01-131O07.g_66_1054

seq1  GAATTCAGGTCACCGACTTGGTTGGCAGCAGGTGTCTCTGCCCAGCCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCACCGACTTGGTTGGCAGCAGGTGTCTCTGCCCAGCCAAC  50

seq1  CATCTCACCACCCCATGTTCCCCTTTTTGAATGTTTCATTTGTCAGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCACCACCCCATGTTCCCCTTTTTGAATGTTTCATTTGTCAGACAC  100

seq1  CCCAGCGGTACCCTGGTGGATAGAGCTTTGTTGGTGTCTGTTCTGATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCGGTACCCTGGTGGATAGAGCTTTGTTGGTGTCTGTTCTGATGAT  150

seq1  GAGACTGTATTTAGCACTGTCTCCTGGACTGCCGCATAATCCAGCCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGTATTTAGCACTGTCTCCTGGACTGCCGCATAATCCAGCCAGTG  200

seq1  CCACTGGTTGCTCTGCTAGGGGTTGGAATCTGGGAGGGGCAGCCTCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGTTGCTCTGCTAGGGGTTGGAATCTGGGAGGGGCAGCCTCCTTT  250

seq1  CTGTAGAATTGCCTGTTAGATTTGACCTTGCCCATGTCCAGAACTCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAATTGCCTGTTAGATTTGACCTTGCCCATGTCCAGAACTCATAA  300

seq1  AAAATGGAAGTGGCTGATCTACCTCTGTGTGGAATCCGTCCTTGCTATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGAAGTGGCTGATCTACCTCTGTGTGGAATCCGTCCTTGCTATCC  350

seq1  TGTCCCTGAGGAAGGCACTGCTCACCTATGTGGGCTGCACACTTACTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGAGGAAGGCACTGCTCACCTATGTGGGCTGCACACTTACTACT  400

seq1  CCTGTAGTAGCTTGGTGGCCATTGATGGCAGCAGGTGACAAGCCAACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGTAGCTTGGTGGCCATTGATGGCAGCAGGTGACAAGCCAACTGG  450

seq1  AAGCAGTCCCTTGTGTTTGCACAGTGGCTTCTGTCGTTGTGCTTTCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTCCCTTGTGTTTGCACAGTGGCTTCTGTCGTTGTGCTTTCTTAC  500

seq1  TTGTTGAAGGTTAAATGCTCTGAGCAGTCTCTCTCCTTGCCGGTCCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAGGTTAAATGCTCTGAGCAGTCTCTCTCCTTGCCGGTCCCCTC  550

seq1  ATCATTCCATCACTCTTCCCCTAGCCCCTTCCCGATTCTTGCTTAATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCCATCACTCTTCCCCTAGCCCCTTCCCGATTCTTGCTTAATATT  600

seq1  GAGAGGGAAGAAATGAGACCACTGAACTGATGTGGGTTTTGTTTGGGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAAGAAATGAGACCACTGAACTGATGTGGGTTTTGTTTGGGGCC  650

seq1  ATGTTCCACGTGAGCACTGTGAGGTGTTGTTGCTGAACAGGGACACTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCACGTGAGCACTGTGAGGTGTTGTTGCTGAACAGGGACACTGTG  700

seq1  TCTGTCCCCTTCCCCATCTTAAGGCTTTC-TTTGGTTGTGTTTGCCATGC  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTGTCCCCTTCCCCATCTTAAGGCTTTCTTTTGGTTGTGTTTGCCATGC  750

seq1  CCCTCCGCTGTGATTTAGCCAGTGTTAGAAGGTGTTTACTAGCATATGAG  799
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGCTGTGA-TTAGCCAGTGTTAGAAGGTGTTTACTAGCATATGAG  799

seq1  GTCTTACTAACACGTTTAAAAGAACATCCTCTTTTCCATCATAAGAACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTACTAACACGTTTAAAAGAACATCCTCTTTTCCATCATAAGAACAT  849

seq1  CCTCTTCTCCATCATAAATGTTAAAAGAGAGAAAAGGGCCCACTCTGAGG  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCTCTTCTCCATCATAAATGTTAAAAGAGAG-AAAGGGCCCACTCTGAGG  898

seq1  TTCCATCCATCTGCTTGTCTTAACTTAGTATATTCCCTTTGGATATTTAT  949
       ||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  -TCCATCCATCTGCTT-TC-TAACTTAGTATATTCCCTTTGGATATTTAT  945

seq1  AGATTTATTATTTTACAATAGAAGTTGAACCCTTGCTCAGAGAAGCCT  997
      | | ||||  |||| |||| |||| ||||||||||| |  ||||||||
seq2  A-AATTAT--TTTTTCAAT-GAAGGTGAACCCTTGCCCGAAGAAGCCT  989