BAC Information

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BAC

Clone NameB6Ng01-132C02
Chromosome14 (Build37)
Map Location 111,312,867 - 111,440,674
singlet/doubletdoublet
Overlap geneEG622052, LOC100043491
Upstream geneSlitrk6, EG668772
Downstream geneLOC100043494, Slitrk5, LOC100043501
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132C02.bB6Ng01-132C02.g
ACCDH933013DH933014
length1,1381,161
definitionDH933013|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C02, 5' end.DH933014|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,439,533 - 111,440,674)(111,312,867 - 111,314,039)
sequence
gaattcaactgtattcaactcaagggcatcaaattgtactgaaatgatta
caactgaactcttatcaatctgggctggttgtaagtaacctccctttcct
gtgctgttcttatgtgagttgtgcatatcctatttctaattagacagcaa
acaaaaattagagatcaagtggatacatactggaaaggcagaagacaagg
taccactgtttgtgagtggtatgatagtatacacaaatgacccccaaaat
tctaccggagtagaataaacaacttcaccaaagtggctaggtataaaatt
tactcataaaaactagtaggcttgctttacatacatgataaaagggctga
gaaaggaattagggaaacaacacccttcataatagatataaatgatataa
aatatcttatacaatacctctaacaaagcaagtgaaagatctgtatgata
ggatccttggaaaaagaaaatgaagatctcagaagatggaaggatctcct
gtgttcatacatcaatagaattaacgtagtaaaataataaatcaatgata
tagcaaagtgaatggaatttttgtgatgtttctacatctgaatgtgtcct
ggaaatgtcattgtccttaaatgtacatttgttcatcattgtggcaggag
atggatcaaaaagaagaaatgtgtgcatatgatagaatattgcaccatta
ttttatactgccttatattttttccattagcctcaaactgctatctttga
tttaagttatttatcttacttttctcatattttagtaagatgaaaaaatt
agatgttcataaaaaaactcatttaatacccagagagaagacaatgagac
taatagcttcatattttcatatctttagattaattccatttattaactca
gacatataaaattcaattttcaacataccttgcaatataattgtcagttt
ctctgaaatgttttaaacacaatattataacaaaataaaatttatttaca
agcatgtattttcttctcatatctcctttcacttgaggatctaagaggat
tttcaaagctttttacggtttcccggaggcagatgatactcaatgtcatg
acaccagctgcccttctcttaatgaaacaccaacatag
gaattcaaggaagcatggaaacttgacagaacaattggtcttagaaatta
atcttgtgtgctctgtatagcttgcattgtaccctggcaactgcaactgc
aatgatcctggcaattgccattatattctgtttctgataaaggggtaaaa
cgtctgattgctctcaataaaattgttacagccataatcttgcttttgcc
ctgccaatctgagcctggtttcattccttgtggcaatgtcagtttacttt
ggcattggcactgacatatatattcattgtcattgctctgcatttatatg
tcagctgaaaatttagaaaattatatatgtatatatatatatatatatac
tatgtatataaatgtatttgattacacaaaatattctctgtacttaatat
ttccctctcatatcatcaactctaatatcacttctaatttaatttttttg
aagttacaataaaatataattttctcattcctttaaccctccccaatcac
acccatatatatttcctcaatctagttctaatttatagcctctttttcaa
tatatgttttttcttaatatataattgaaacatgcccaatatatataata
tttatatataatattacttgtatctataagttctcagatccaaacttttg
ccattggaaaatcaatttgtgggcacatacgtagggaagacttttttttt
tctactctcagatttcctttgttaactttaatacatttgtttggctttaa
gtttcatgagactttccacgtttatgttagggtttctattgcaattgttt
ttgtatagttcatgttttgctaatcatgttagtgagatttttttggacat
agcttctattatttctaggagagacaatttcctgtttctatggctctagc
aatctttcaccacctcttaagcaatgatctctgaaccccaggtgatggag
ttatattgtcttcatttggctggactcaacaactctgcatttgtttgtgt
gattttctgtaacatttctgagacttgttcttcagaaatgaacataaggc
ctgaatacatctctagaatttgctgaggttaaaaagacaatcaacgtcca
acgggcctcacctgactcatatgtttgcatggactgccacacacacatat
gtgcacacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111439533_111440674
seq2: B6Ng01-132C02.b_47_1184 (reverse)

seq1  CTATGTATGGGTGTTCATTAGAGA-AAGGGCAGCT-GTGTCATGGACA-T  47
      |||||| |||   ||||||| ||| |||||||||| ||||||| |||| |
seq2  CTATGT-TGGTGTTTCATTA-AGAGAAGGGCAGCTGGTGTCAT-GACATT  47

seq1  GAGTATTCATCTGGCCTCTGGGAAACCGTAAAAAGCTTTGAAAAT-CTCT  96
      ||||| |||||| ||||| |||||||||||||||||||||||||| ||||
seq2  GAGTA-TCATCT-GCCTCCGGGAAACCGTAAAAAGCTTTGAAAATCCTCT  95

seq1  TAGATCCTCAAGTGAAAGGAGATATGAGAAGAAAATACATGCTTTGTAAA  146
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGATCCTCAAGTGAAAGGAGATATGAGAAGAAAATACATGC-TTGTAAA  144

seq1  TAAATTTTATTTTGTTATAATATTGGTGTTTAAAAACATTTCAGAGAAAC  196
      |||||||||||||||||||||||| |||||| ||||||||||||||||||
seq2  TAAATTTTATTTTGTTATAATATT-GTGTTT-AAAACATTTCAGAGAAAC  192

seq1  TGACAATTATATTGCAAGGTATGTTGAAAATTGAATTTTATATGTCTGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTATATTGCAAGGTATGTTGAAAATTGAATTTTATATGTCTGAG  242

seq1  TTAATAAATGGAATTAATCTAAAGATATGAAAATATGAAGCTATTAGTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATGGAATTAATCTAAAGATATGAAAATATGAAGCTATTAGTCT  292

seq1  CATTGTCTTCTCTCTGGGTATTAAATGAGTTTTTTTATGAACATCTAATT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCTTCTCTCTGGGTATTAAATGAGTTTTTTTATGAACATCTAATT  342

seq1  TTTTCATCTTACTAAAATATGAGAAAAGTAAGATAAATAACTTAAATCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCTTACTAAAATATGAGAAAAGTAAGATAAATAACTTAAATCAA  392

seq1  AGATAGCAGTTTGAGGCTAATGGAAAAAATATAAGGCAGTATAAAATAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCAGTTTGAGGCTAATGGAAAAAATATAAGGCAGTATAAAATAAT  442

seq1  GGTGCAATATTCTATCATATGCACACATTTCTTCTTTTTGATCCATCTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAATATTCTATCATATGCACACATTTCTTCTTTTTGATCCATCTCC  492

seq1  TGCCACAATGATGAACAAATGTACATTTAAGGACAATGACATTTCCAGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAATGATGAACAAATGTACATTTAAGGACAATGACATTTCCAGGA  542

seq1  CACATTCAGATGTAGAAACATCACAAAAATTCCATTCACTTTGCTATATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCAGATGTAGAAACATCACAAAAATTCCATTCACTTTGCTATATC  592

seq1  ATTGATTTATTATTTTACTACGTTAATTCTATTGATGTATGAACACAGGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTATTATTTTACTACGTTAATTCTATTGATGTATGAACACAGGA  642

seq1  GATCCTTCCATCTTCTGAGATCTTCATTTTCTTTTTCCAAGGATCCTATC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTCCATCTTCTGAGATCTTCATTTTCTTTTTCCAAGGATCCTATC  692

seq1  ATACAGATCTTTCACTTGCTTTGTTAGAGGTATTGTATAAGATATTTTAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGATCTTTCACTTGCTTTGTTAGAGGTATTGTATAAGATATTTTAT  742

seq1  ATCATTTATATCTATTATGAAGGGTGTTGTTTCCCTAATTCCTTTCTCAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTATATCTATTATGAAGGGTGTTGTTTCCCTAATTCCTTTCTCAG  792

seq1  CCCTTTTATCATGTATGTAAAGCAAGCCTACTAGTTTTTATGAGTAAATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTATCATGTATGTAAAGCAAGCCTACTAGTTTTTATGAGTAAATT  842

seq1  TTATACCTAGCCACTTTGGTGAAGTTGTTTATTCTACTCCGGTAGAATTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTAGCCACTTTGGTGAAGTTGTTTATTCTACTCCGGTAGAATTT  892

seq1  TGGGGGTCATTTGTGTATACTATCATACCACTCACAAACAGTGGTACCTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTCATTTGTGTATACTATCATACCACTCACAAACAGTGGTACCTT  942

seq1  GTCTTCTGCCTTTCCAGTATGTATCCACTTGATCTCTAATTTTTGTTTGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGCCTTTCCAGTATGTATCCACTTGATCTCTAATTTTTGTTTGC  992

seq1  TGTCTAATTAGAAATAGGATATGCACAACTCACATAAGAACAGCACAGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAATTAGAAATAGGATATGCACAACTCACATAAGAACAGCACAGGA  1042

seq1  AAGGGAGGTTACTTACAACCAGCCCAGATTGATAAGAGTTCAGTTGTAAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGTTACTTACAACCAGCCCAGATTGATAAGAGTTCAGTTGTAAT  1092

seq1  CATTTCAGTACAATTTGATGCCCTTGAGTTGAATACAGTTGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGTACAATTTGATGCCCTTGAGTTGAATACAGTTGAATTC  1138

seq1: chr14_111312867_111314039
seq2: B6Ng01-132C02.g_67_1227

seq1  GAATTCAAGGAAGCATGGAAACTTGACAGAACAATTGGTCTTAGAAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGAAGCATGGAAACTTGACAGAACAATTGGTCTTAGAAATTA  50

seq1  ATCTTGTGTGCTCTGTATAGCTTGCATTGTACCCTGGCAACTGCAACTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTGTGCTCTGTATAGCTTGCATTGTACCCTGGCAACTGCAACTGC  100

seq1  AATGATCCTGGCAATTGCCATTATATTCTGTTTCTGATAAAGGGGTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCCTGGCAATTGCCATTATATTCTGTTTCTGATAAAGGGGTAAAA  150

seq1  CGTCTGATTGCTCTCAATAAAATTGTTACAGCCATAATCTTGCTTTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGATTGCTCTCAATAAAATTGTTACAGCCATAATCTTGCTTTTGCC  200

seq1  CTGCCAATCTGAGCCTGGTTTCATTCCTTGTGGCAATGTCAGTTTACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAATCTGAGCCTGGTTTCATTCCTTGTGGCAATGTCAGTTTACTTT  250

seq1  GGCATTGGCACTGACATATATATTCATTGTCATTGCTCTGCATTTATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGGCACTGACATATATATTCATTGTCATTGCTCTGCATTTATATG  300

seq1  TCAGCTGAAAATTTAGAAAATTATATATGTATATATATATATATATATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGAAAATTTAGAAAATTATATATGTATATATATATATATATATAC  350

seq1  TATGTATATAAATGTATTTGATTACACAAAATATTCTCTGTACTTAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATAAATGTATTTGATTACACAAAATATTCTCTGTACTTAATAT  400

seq1  TTCCCTCTCATATCATCAACTCTAATATCACTTCTAATTTAATTTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTCATATCATCAACTCTAATATCACTTCTAATTTAATTTTTTTG  450

seq1  AAGTTACAATAAAATATAATTTTCTCATTCCTTTAACCCTCCCCAATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACAATAAAATATAATTTTCTCATTCCTTTAACCCTCCCCAATCAC  500

seq1  ACCCATATATATTTCCTCAATCTAGTTCTAATTTATAGCCTCTTTTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATATATATTTCCTCAATCTAGTTCTAATTTATAGCCTCTTTTTCAA  550

seq1  TATATGTTTTTTCTTAATATATAATTGAAACATGCCCAATATATATAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTTTTCTTAATATATAATTGAAACATGCCCAATATATATAATA  600

seq1  TTTATATATAATATTACTTGTATCTATAAGTTCTCAGATCCAAACTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATAATATTACTTGTATCTATAAGTTCTCAGATCCAAACTTTTG  650

seq1  CCATTGGAAAATCAATTTGTGGGCACATACGTAGGGAAGACTTTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGAAAATCAATTTGTGGGCACATACGTAGGGAAGACTTTTTTTTT  700

seq1  TCTACTCTCAGATTTCCTTTGTTAACTTTAATACATTTGTTTGGCTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCTCAGATTTCCTTTGTTAACTTTAATACATTTGTTTGGCTTTAA  750

seq1  GTTTCATGAGACTTTCCACGTTTATGTTAGGGTTTCTATTGCAATTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATGAGACTTTCCACGTTTATGTTAGGGTTTCTATTGCAATTGTTT  800

seq1  TTGTATAGTTCATGTTTTGCTAATCATGTTAGTGAGATTTTTTTGGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAGTTCATGTTTTGCTAATCATGTTAGTGAGATTTTTTTGGACAT  850

seq1  AGCTTCTATTATTTCTAGGAGAGACAATTTCCTGTTTCTATGGCTCTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTATTATTTCTAGGAGAGACAATTTCCTGTTTCTATGGCTCTAGC  900

seq1  AATCTTTCACCACCTCTTAGGCAATGATCTCTGAACCCCAGGTGATGGAG  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATCTTTCACCACCTCTTAAGCAATGATCTCTGAACCCCAGGTGATGGAG  950

seq1  TTATATTGTCTTCATTTGGACTGGACTCAACAACTCTGCATTTTGTTTGG  1000
      ||||||||||||||||||| |||||||||||||||||||| |||||||| 
seq2  TTATATTGTCTTCATTTGG-CTGGACTCAACAACTCTGCA-TTTGTTTG-  997

seq1  TTGTGATTTTCTGTAACATTTCTGAAGACTGGTTCTTCAGAAATGAACAT  1050
       ||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  -TGTGATTTTCTGTAACATTTCTG-AGACTTGTTCTTCAGAAATGAACAT  1045

seq1  AAAGCCTGAATTACATCTCTAGAATTTGCTGAGTGTAAAAAGACAATCAA  1100
      || ||||||| ||||||||||||||||||||||  |||||||||||||||
seq2  AAGGCCTGAA-TACATCTCTAGAATTTGCTGAGGTTAAAAAGACAATCAA  1094

seq1  CGTCCAACAGCCCTCACACTTGATCTATGTAGTGTGCAATTGGACCTGCC  1150
      |||||||| | |||  ||| |||   || | || ||||  |||| |||||
seq2  CGTCCAACGGGCCT--CACCTGACTCATAT-GTTTGCA--TGGA-CTGCC  1138

seq1  ACACACACATATGTGCACACACA  1173
      |||||||||||||||||||||||
seq2  ACACACACATATGTGCACACACA  1161