BAC Information

Click to search

BAC

Clone NameB6Ng01-132C24
Chromosome14 (Build37)
Map Location 111,225,658 - 111,226,637
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772
Downstream geneEG622052, LOC100043491, LOC100043494, Slitrk5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132C24.bB6Ng01-132C24.g
ACCDH933056DH933057
length1,242977
definitionDH933056|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C24, 5' end.DH933057|Mus musculus domesticus DNA, BAC clone: B6Ng01-132C24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacttgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaatatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccatctaataccagtcagaatgactaagatcaaaaattcaggtgacagt
agatgctggtgaggatgtggagaaagaagacactcctccattgttagtgg
gattgcaagcttgtacaaccactctggaaatcagtctggtggttcctcag
aaaattggatatattactactggaagatccagatattcctctccagggca
tatacccagaagatgttccaacttataataaggacacatgctcccccctt
tatccatgagaataattccccctacactccctacccccacacaatcagac
ctctaaactctctttggcctccagtttcttgagtgttaggtatatcttgt
ctaactgaacacagaccctgcagtcctcaacttcatatgagttagggacc
tcattatcaggtagtgtatactgcctagtttgtggtctagtgtttgagaa
atctcagaggataaggttgattaagaagaaattaagaagatctcagaaga
tggaaagatttcccatgctcatggattggcaggatcaatatagtaaaaat
ggctatcttgccaaaagcaatctacagattcaatgcaatccccatcaaaa
ttccaattcaattcttcaacaaattagaaagggcaatatgcaaattcatc
tggaataacaaaaaaacctaggatagcaaaaactcttctcaaggataaaa
gaacctctggtgtaatcaccatgcctgacctaaagctgtactacagagca
attgtgataaaatctgcatggtactcgtatactgacagacaagtagacca
atggaatagaattgaagacccagaatgaacccacacatctatggtcactt
gatctttgacagggagcaaaaccatccagtggaaaaaaagacagcatttt
cacaaatgatgctggcacactggcggttatcatgtggagaatggagatga
tccattctatctcctttttacttacgtcatattctagtggattaggactc
ccaataaaccgaagacctgatgttagaggagaagtagggaacctcgaaga
ttggtacagggtaactctgatgacgcatgccttgtgtctaagattggtac
tgccaaagggaccctttataaagtgcagagctctcgtgccag
gaattctccaggcatagcttgggtttctgtagattattatctcactaaat
catgctgtagatttttttttttttttttggtatacactgtaatttgaatt
ataagaaaaaaaagcatgctttttttttttatccttatacttatctgcaa
gaaccaatttatttcctgtcatgttattatggagctatatcagttacctc
gaatagcttcttctgtcataagcttctgagttgcagtatttatgtttgtg
cgattctttctactaaaagaatgagttgttaaaggatgttgtaaaatagt
atttatctgcaaagagagaacagactgtgcatggtttaaaaaaagggaga
tgttgcatatcccggagaaggtagaatttcctcttatttgaagattcctt
ctcatttattcaccagttttccataaatgcatgttttgtttcagattaag
tgaatgattcccgggaatcacggattttcacatttactggggagggaaaa
ctctaatggaacaaggcaaatatttaaaatatgaaaactcaggtgcattt
tctcttttattcacatatttctaagcaaccactttactatgtggggatca
gaatgacagaggagttctacttatcttgggaaaaaaaaaatatagagcca
aagttctgaggtagaagagaaagaacagaagtttcctttttttttccttg
aaagaaagagtgggaaaaagttagagaaggtagaattgtaaggatagaaa
attctgaaatatcgttttctgtgtataatggaaattttacctttacataa
taaaatacagtatggaaaaaatcaaaacaacaacaaacaaacagcaaaca
aacaaaaaacatcctggcctcacaccagtcagaatggctagatcaaaact
caggtgacagcagatgctggcgaggatgtgggagaagaggacccctcctc
ctattgctgggggtgaggggggattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111225658_111226637
seq2: B6Ng01-132C24.g_66_1042

seq1  GAATTCTCCAGGCATAGCTTGGGTTTCTGTAGATTATTATCTCACTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGGCATAGCTTGGGTTTCTGTAGATTATTATCTCACTAAAT  50

seq1  CATGCTGTAGATTTTTTTTTTTTTTTTTGGTATACACTGTAATTTGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTAGATTTTTTTTTTTTTTTTTGGTATACACTGTAATTTGAATT  100

seq1  ATAAGAAAAAAAAGCATGCTTTTTTTTTTTATCCTTATACTTATCTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAAAAAAGCATGCTTTTTTTTTTTATCCTTATACTTATCTGCAA  150

seq1  GAACCAATTTATTTCCTGTCATGTTATTATGGAGCTATATCAGTTACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAATTTATTTCCTGTCATGTTATTATGGAGCTATATCAGTTACCTC  200

seq1  GAATAGCTTCTTCTGTCATAAGCTTCTGAGTTGCAGTATTTATGTTTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTTCTTCTGTCATAAGCTTCTGAGTTGCAGTATTTATGTTTGTG  250

seq1  CGATTCTTTCTACTAAAAGAATGAGTTGTTAAAGGATGTTGTAAAATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTCTTTCTACTAAAAGAATGAGTTGTTAAAGGATGTTGTAAAATAGT  300

seq1  ATTTATCTGCAAAGAGAGAACAGACTGTGCATGGTTTAAAAAAAGGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTGCAAAGAGAGAACAGACTGTGCATGGTTTAAAAAAAGGGAGA  350

seq1  TGTTGCATATCCCGGAGAAGGTAGAATTTCCTCTTATTTGAAGATTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCATATCCCGGAGAAGGTAGAATTTCCTCTTATTTGAAGATTCCTT  400

seq1  CTCATTTATTCACCAGTTTTCCATAAATGCATGTTTTGTTTCAGATTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTATTCACCAGTTTTCCATAAATGCATGTTTTGTTTCAGATTAAG  450

seq1  TGAATGATTCCCGGGAATCACGGATTTTCACATTTACTGGGGAGGGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATTCCCGGGAATCACGGATTTTCACATTTACTGGGGAGGGAAAA  500

seq1  CTCTAATGGAACAAGGCAAATATTTAAAATATGAAAACTCAGGTGCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATGGAACAAGGCAAATATTTAAAATATGAAAACTCAGGTGCATTT  550

seq1  TCTCTTTTATTCACATATTTCTAAGCAACCACTTTACTATGTGGGGATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTATTCACATATTTCTAAGCAACCACTTTACTATGTGGGGATCA  600

seq1  GAATGACAGAGGAGTTCTACTTATCTTGGGAAAAAAAAAATATAGAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACAGAGGAGTTCTACTTATCTTGGGAAAAAAAAAATATAGAGCCA  650

seq1  AAGTTCTGAGGTAGAAGAGAAAGAACAGAAGTTTCCTTTTTTTTTCCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGAGGTAGAAGAGAAAGAACAGAAGTTTCCTTTTTTTTTCCTTG  700

seq1  AAAGAAAGAGTGGGAAAAAGTTAGAGAAGGTAGAATTGTAAGGATAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAGTGGGAAAAAGTTAGAGAAGGTAGAATTGTAAGGATAGAAA  750

seq1  ATTCTGAAATATCGTTTTCTGTGTATAATGGAAATTTTACCTTTACATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAAATATCGTTTTCTGTGTATAATGGAAATTTTACCTTTACATAA  800

seq1  TAAAATACAGTATGGAAAAAATCAAAAACAACAAACAAACAAACAAGCAA  850
      ||||||||||||||||||||||| |||||||| ||||||||||| |||||
seq2  TAAAATACAGTATGGAAAAAATC-AAAACAAC-AACAAACAAAC-AGCAA  847

seq1  ACAAACAAAAAACATCCTGGCCTCACACCAGTCAGAATGGCTAAGATCAA  900
      |||||||||||||||||||||||||||||||||||||||||| ||||| |
seq2  ACAAACAAAAAACATCCTGGCCTCACACCAGTCAGAATGGCT-AGATC-A  895

seq1  AAACTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACAC  950
      ||||||||||||||||||||||||||||||||||||   ||||||| | |
seq2  AAACTCAGGTGACAGCAGATGCTGGCGAGGATGTGGGAGAAGAGGACCCC  945

seq1  TCCTCC-ATTGCTGGGGGTGA-GGGGGATTGC  980
      |||||| |||||||||||||| ||||||||||
seq2  TCCTCCTATTGCTGGGGGTGAGGGGGGATTGC  977