BAC Information

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BAC

Clone NameB6Ng01-132F15
Chromosome14 (Build37)
Map Location 77,913,575 - 78,027,165
singlet/doubletdoublet
Overlap geneD230005D02Rik
Upstream gene2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, LOC100043755, LOC676171, EG629678
Downstream geneGm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11, Dgkh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132F15.bB6Ng01-132F15.g
ACCDH933176DH933177
length1,112954
definitionDH933176|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F15, 5' end.DH933177|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,913,575 - 77,914,701)(78,026,212 - 78,027,165)
sequence
gaattctttattctatttctaagcatagaatagtttgcatactctggtgg
ttgatatatgtatttccagttttacgtccccagggactctcctgtctttt
atcagaaatcagacttctgtacctgtttctcaatgtttaaaatatctatt
gtatattcattatctattttttgtccagcaccaaactgatcgattcatac
agcgctgtactttgttcatgggaagctctgtcatctctttcctgcacttc
atgttcaggtctctttgttccttctctgcagaaacacagcgccacgggag
gctcggggtccacaccggccacctcaggcgctcttcagtgtgactgtaga
atgccggagaccagctttaatgtttcaagaggttcttaaagattatttag
tatagcatcccttccgagaaatcctctctgcaatatctctgacaggatta
tggaggggctcggtttatgagcacttggcttgctcccaaagtttctgata
tttctaaatgaccaagtactcttcctgtctttgttaaaaattaaactgac
actaaatcctgttcctaggtgcttcttcggtttattgagagattaaaaat
tatcagcaaagcgaaagatacatttttcatatcctttgatttttatcaga
aggatttcccaagaaatcgcagccctcgttaccatcgtgttgtacctttg
tgaggttctgcctaatgctgccgtaaatagacctcatatgcagccgtaaa
tagacctcatatgctgaggtagatatgcctcttccacacccctgtggtca
ggaacgcccactcacctccatgtgaagttctgctggagatcattacaatg
tacctgttttctcttgaccaaaatgcaatgctgcattgttgcgcatccac
cctacattctctgctacaaggacatactgcttctctacgcctacagtctc
ctgtttgtttatccccataattgtcttaggatttgtgggtttgtagttta
tttgttttgctgtcagtgtttgtgcatgtcctagggccatgctctcaaat
tgtctgtagatgtcattctcacattatcacaagggagcgtgattgcagca
taatggtaggtg
gaattccttggaggaggccctctcttgttactcggcttcttattgaacac
aagagaaagtgctgtggagagcttctataaagggctttgttaacacaggg
ctgatgatccggcatcaattagaatattccttaggagcctaaatgttaca
tggcaggggctgaaagaaagagtctaatttaaatgttaatttctatttga
aaagcccaaggacctagcaactttcacactcccccccctcaaaaaattta
aaaaaaaaatcaactatagatgtatttttcatctgtggtaattttaccct
acctctcatttcaacctcgctgttctttgtcagcttcgtcctttaccttc
ccctgtttgctcaggatttaatgacctgaaaggacagctcattcattcaa
ccccgcggagttacatatggagcctctgatacacagttaggaaagcggaa
tgccacagaaaagaggggaagtagtctgggggactgcctcgtacttctga
ggagcagtggatgtgagagaaatgccatcattctctgtacaccccgccta
tactgccgtccctgtcgctactggagtgcaggtgacatggactctgtgaa
ggagagaggcactagtgggtcagagatggaaaggtggaggggcaggacga
aagctcaggaggtaaagaaagggcttgccttgtgaacatgaggccctgag
tttttatctctgagaacctatgttaaaacaagcaaacagagaggtatttc
actgcatgcctgtgacccctacacatggggagacatagatggttaaatcc
ttggacctctctggctagccaaccagcccggcatactgggtgaggtttat
gccagtggagggtggaggtgagggggcaaacaaaccaaatggatgatgcc
tgaggaccaactgccaaggttgtcctccggcctctatgtgtacatgtggg
aagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77913575_77914701
seq2: B6Ng01-132F15.b_49_1160

seq1  GAATTCTTTATTCTATTTCTAAGCATAGAATAGTTTGCATACTCTGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATTCTATTTCTAAGCATAGAATAGTTTGCATACTCTGGTGG  50

seq1  TTGATATATGTATTTCCAGTTTTACGTCCCCAGGGACTCTCCTGTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATATGTATTTCCAGTTTTACGTCCCCAGGGACTCTCCTGTCTTTT  100

seq1  ATCAGAAATCAGACTTCTGTACCTGTTTCTCAATGTTTAAAATATCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAATCAGACTTCTGTACCTGTTTCTCAATGTTTAAAATATCTATT  150

seq1  GTATATTCATTATCTATTTTTTGTCCAGCACCAAACTGATCGATTCATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCATTATCTATTTTTTGTCCAGCACCAAACTGATCGATTCATAC  200

seq1  AGCGCTGTACTTTGTTCATGGGAAGCTCTGTCATCTCTTTCCTGCACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTGTACTTTGTTCATGGGAAGCTCTGTCATCTCTTTCCTGCACTTC  250

seq1  ATGTTCAGGTCTCTTTGTTCCTTCTCTGCAGAAACACAGCGCCACGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAGGTCTCTTTGTTCCTTCTCTGCAGAAACACAGCGCCACGGGAG  300

seq1  GCTCGGGGTCCACACCGGCCACCTCAGGCGCTCTTCAGTGTGACTGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGGGTCCACACCGGCCACCTCAGGCGCTCTTCAGTGTGACTGTAGA  350

seq1  ATGCCGGAGACCAGCTTTAATGTTTCAAGAGGTTCTTAAAGATTATTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCGGAGACCAGCTTTAATGTTTCAAGAGGTTCTTAAAGATTATTTAG  400

seq1  TATAGCATCCCTTCCGAGAAATCCTCTCTGCAATATCTCTGACAGGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCATCCCTTCCGAGAAATCCTCTCTGCAATATCTCTGACAGGATTA  450

seq1  TGGAGGGGCTCGGTTTATGAGCACTTGGCTTGCTCCCAAAGTTTCTGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGGCTCGGTTTATGAGCACTTGGCTTGCTCCCAAAGTTTCTGATA  500

seq1  TTTCTAAATGACCAAGTACTCTTCCTGTCTTTGTTAAAAATTAAACTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAATGACCAAGTACTCTTCCTGTCTTTGTTAAAAATTAAACTGAC  550

seq1  ACTAAATCCTGTTCCTAGGTGCTTCTTCGGTTTATTGAGAGATTAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATCCTGTTCCTAGGTGCTTCTTCGGTTTATTGAGAGATTAAAAAT  600

seq1  TATCAGCAAAGCGAAAGATACATTTTTCATATCCTTTGATTTTTATCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCAAAGCGAAAGATACATTTTTCATATCCTTTGATTTTTATCAGA  650

seq1  AGGATTTCCCAAGAAATCGCAGCCCTCGTTACCATCGTGTTGTACCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTCCCAAGAAATCGCAGCCCTCGTTACCATCGTGTTGTACCTTTG  700

seq1  TGAGGTTCTGCCTAATGCTGCCGTAAATAGACCTCATATGCAGCCGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTCTGCCTAATGCTGCCGTAAATAGACCTCATATGCAGCCGTAAA  750

seq1  TAGACCTCATATGCTGAGGTAGATATGCCTCTTCCACACCCCTGTGGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTCATATGCTGAGGTAGATATGCCTCTTCCACACCCCTGTGGTCA  800

seq1  GGAACGCCCACTCACCTCCATGTGAAGTTCTGCTGGAGATCATTACAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGCCCACTCACCTCCATGTGAAGTTCTGCTGGAGATCATTACAATG  850

seq1  TACCTGTTTTCTCTTGACCAAAATGCAATGCTGCATTGTTGCGCATCCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTTTTCTCTTGACCAAAATGCAATGCTGCATTGTTGCGCATCCAC  900

seq1  CCTACATTCTCTGCTACAAGGACATACTGCTTCTCTACGCCTACAGTCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATTCTCTGCTACAAGGACATACTGCTTCTCTACGCCTACAGTCTC  950

seq1  CTGTTTGTTTTATCCCCATAATTGTCTTAGGGATTTGTGGGTTTTGTTAG  1000
      ||||||| ||||||||||||||||||||| ||||||||||||||   |||
seq2  CTGTTTG-TTTATCCCCATAATTGTCTTA-GGATTTGTGGGTTT--GTAG  996

seq1  TTTATTTGTTTTGCTGTCAGTGTTTTGTGCATTGTCCTAGGGCCATGCTC  1050
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  TTTATTTGTTTTGCTGTCAGTG-TTTGTGCA-TGTCCTAGGGCCATGCTC  1044

seq1  TCCAAATTGGTCTGTTAGAATAGTCATGTCTCACATTTATCACAAGGTAG  1100
      | |||||| ||||| ||||   ||||| ||||||| ||||||||||| ||
seq2  T-CAAATT-GTCTG-TAGA--TGTCAT-TCTCACA-TTATCACAAGGGAG  1087

seq1  CGTGAATGCAGCATTAATGTGTAGGTG  1127
      ||||| ||||||| ||||| |||||||
seq2  CGTGATTGCAGCA-TAATG-GTAGGTG  1112

seq1: chr14_78026212_78027165
seq2: B6Ng01-132F15.g_67_1020 (reverse)

seq1  GCTTCCCACATGTACACATAGAGGCCGGAGGACAACCTTGGCAGTTGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCACATGTACACATAGAGGCCGGAGGACAACCTTGGCAGTTGGTC  50

seq1  CTCAGGCATCATCCATTTTGGTTTGTTTG-CCCCTCACCTCCACCCTCCA  99
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  CTCAGGCATCATCCA-TTTGGTTTGTTTGCCCCCTCACCTCCACCCTCCA  99

seq1  CTGGCATAAACCTCACCCAGTATGCCGGGCTGGTTGGCTAGCCAGAGAGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATAAACCTCACCCAGTATGCCGGGCTGGTTGGCTAGCCAGAGAGG  149

seq1  TCCAAGGATTTAACCATCTATGTCTCCCCATGTGTAGGGGTCACAGGCAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGATTTAACCATCTATGTCTCCCCATGTGTAGGGGTCACAGGCAT  199

seq1  GCAGTGAAATACCTCTCTGTTTGCTTGTTTTAACATAGGTTCTCAGAGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAAATACCTCTCTGTTTGCTTGTTTTAACATAGGTTCTCAGAGAT  249

seq1  AAAAACTCAGGGCCTCATGTTCACAAGGCAAGCCCTTTCTTTACCTCCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCAGGGCCTCATGTTCACAAGGCAAGCCCTTTCTTTACCTCCTG  299

seq1  AGCTTTCGTCCTGCCCCTCCACCTTTCCATCTCTGACCCACTAGTGCCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCGTCCTGCCCCTCCACCTTTCCATCTCTGACCCACTAGTGCCTC  349

seq1  TCTCCTTCACAGAGTCCATGTCACCTGCACTCCAGTAGCGACAGGGACGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCACAGAGTCCATGTCACCTGCACTCCAGTAGCGACAGGGACGG  399

seq1  CAGTATAGGCGGGGTGTACAGAGAATGATGGCATTTCTCTCACATCCACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATAGGCGGGGTGTACAGAGAATGATGGCATTTCTCTCACATCCACT  449

seq1  GCTCCTCAGAAGTACGAGGCAGTCCCCCAGACTACTTCCCCTCTTTTCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCAGAAGTACGAGGCAGTCCCCCAGACTACTTCCCCTCTTTTCTG  499

seq1  TGGCATTCCGCTTTCCTAACTGTGTATCAGAGGCTCCATATGTAACTCCG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTCCGCTTTCCTAACTGTGTATCAGAGGCTCCATATGTAACTCCG  549

seq1  CGGGGTTGAATGAATGAGCTGTCCTTTCAGGTCATTAAATCCTGAGCAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTTGAATGAATGAGCTGTCCTTTCAGGTCATTAAATCCTGAGCAAA  599

seq1  CAGGGGAAGGTAAAGGACGAAGCTGACAAAGAACAGCGAGGTTGAAATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAAGGTAAAGGACGAAGCTGACAAAGAACAGCGAGGTTGAAATGA  649

seq1  GAGGTAGGGTAAAATTACCACAGATGAAAAATACATCTATAGTTGATTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGGGTAAAATTACCACAGATGAAAAATACATCTATAGTTGATTTT  699

seq1  TTTTTTAAATTTTTTGAGGGGGGGGAGTGTGAAAGTTGCTAGGTCCTTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAATTTTTTGAGGGGGGGGAGTGTGAAAGTTGCTAGGTCCTTGG  749

seq1  GCTTTTCAAATAGAAATTAACATTTAAATTAGACTCTTTCTTTCAGCCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCAAATAGAAATTAACATTTAAATTAGACTCTTTCTTTCAGCCCC  799

seq1  TGCCATGTAACATTTAGGCTCCTAAGGAATATTCTAATTGATGCCGGATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTAACATTTAGGCTCCTAAGGAATATTCTAATTGATGCCGGATC  849

seq1  ATCAGCCCTGTGTTAACAAAGCCCTTTATAGAAGCTCTCCACAGCACTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCCTGTGTTAACAAAGCCCTTTATAGAAGCTCTCCACAGCACTTT  899

seq1  CTCTTGTGTTCAATAAGAAGCCGAGTAACAAGAGAGGGCCTCCTCCAAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTGTTCAATAAGAAGCCGAGTAACAAGAGAGGGCCTCCTCCAAGG  949

seq1  AATTC  954
      |||||
seq2  AATTC  954