BAC Information

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BAC

Clone NameB6Ng01-133A22
Chromosome14 (Build37)
Map Location 25,075,167 - 25,076,300
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnma1, LOC620499, Dlg5
Downstream geneLOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315, LOC100039411
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133A22.bB6Ng01-133A22.g
ACCDH933709DH933710
length1,2101,127
definitionDH933709|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A22, 5' end.DH933710|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcccccacctgatagtcaatcagcttatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccagtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaagggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttga
ataatagacctaagctctgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaagggcagcaagggaaattcataccttatgtgctcccactccccgttaa
cctctggggaagggatattatgcagcatttgggacttattttgtctaatg
aaaatgccccattgagagggtattcagctaaagcaaaaatatcatggcaa
agatgggttataaagaaaggaaaagggtaggacgtcaagagcaaggaagg
acagagcccatatcacctaatatctaatgattgggcagttttagttacct
tccttttcagacaaatagataccattatccaaacatccacttttacagtt
tgtccaaatcatctgtgtgtttcacaataacggtagaggccacttaaaat
ggattgtgtatatactgatgatcaaactgtatagtgcctatgtgctatgt
agtgtatcaacaatatatgaaaatcactcagtgtgaatgttagtgctgga
agttagcttgaccataattgtccgaatctgctaggtggtccagtgcgagc
taatctctat
gaattccaagcatatatctccttggaggaagataccttggatttctgggg
agccacctgatacttccccactccctgggcccctttcctcttcctctgag
cgcacccaggatttagttccttctcttcctattactcgaggagcctcatc
tctaagtaaccagatttactgctggctttcctttctgctgattggccaga
agaacaagttcatgagccttttgggaaactctgcaagtttcaggttaacc
ctgtgatgggaagccagagatcttggagcagtaacacagacatcagggac
tatggaaacttcccaaccagaaaaggcccaccttggcttggtctctgggc
tttgttctcccatgtcatccaatcctctggtctcagggtctgggagctgt
accctacctctctgagcctcctttattaaaaaagacagcttctccctccc
tggaataatttctacccaaccctgccctcctcttcaccatcaggtaagaa
caaagggacctgaaatctcagtgtgtagcccagtgtgaacccagtcccac
cagctttccatcactgagtctcaatcctcagagccaccctctgacattat
taacctgcctactgagcaaatggggaaactgtgtcatggaggggctcaat
aatgcggcacaggagaagagggattaaaatttgggctcatggtagagtgc
ttgcctaacatactcaatgccttgggctcagcattcagcattgaaaaaaa
aaaaaaaaaaaaaagaaaagaaaaaaaatcaaaccaaactgaaacacaca
cacacacacacacacacacacaccccctccacccgttgaagccataaaat
ttccaaacccaagtccagctctttctgtcttcacttttatcttccaggac
tgtttccaaaggaatatgcatattgactctttgactctttgggatgcctc
cagagttgaaagattcatttgcttttcagaggaaggagggttcttgctca
tctattctttgtccatttggtctcacagacacttgggatctcagaactat
gaaaattacgtgggatccctgaagctttatggccagaagcaaatgatcag
gaagagaaaaataaactcatttactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25075167_25076300
seq2: B6Ng01-133A22.g_66_1192

seq1  GAATTCCAAGCATATATCTCCTTGGAGGAAGATACCTTGGATTTCTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCATATATCTCCTTGGAGGAAGATACCTTGGATTTCTGGGG  50

seq1  AGCCACCTGATACTTCCCCACTCCCTGGGCCCCTTTCCTCTTCCTCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCTGATACTTCCCCACTCCCTGGGCCCCTTTCCTCTTCCTCTGAG  100

seq1  CGCACCCAGGATTTAGTTCCTTCTCTTCCTATTACTCGAGGAGCCTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACCCAGGATTTAGTTCCTTCTCTTCCTATTACTCGAGGAGCCTCATC  150

seq1  TCTAAGTAACCAGATTTACTGCTGGCTTTCCTTTCTGCTGATTGGCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTAACCAGATTTACTGCTGGCTTTCCTTTCTGCTGATTGGCCAGA  200

seq1  AGAACAAGTTCATGAGCCTTTTGGGAAACTCTGCAAGTTTCAGGTTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGTTCATGAGCCTTTTGGGAAACTCTGCAAGTTTCAGGTTAACC  250

seq1  CTGTGATGGGAAGCCAGAGATCTTGGAGCAGTAACACAGACATCAGGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATGGGAAGCCAGAGATCTTGGAGCAGTAACACAGACATCAGGGAC  300

seq1  TATGGAAACTTCCCAACCAGAAAAGGCCCACCTTGGCTTGGTCTCTGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAACTTCCCAACCAGAAAAGGCCCACCTTGGCTTGGTCTCTGGGC  350

seq1  TTTGTTCTCCCATGTCATCCAATCCTCTGGTCTCAGGGTCTGGGAGCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTCCCATGTCATCCAATCCTCTGGTCTCAGGGTCTGGGAGCTGT  400

seq1  ACCCTACCTCTCTGAGCCTCCTTTATTAAAAAAGACAGCTTCTCCCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACCTCTCTGAGCCTCCTTTATTAAAAAAGACAGCTTCTCCCTCCC  450

seq1  TGGAATAATTTCTACCCAACCCTGCCCTCCTCTTCACCATCAGGTAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAATTTCTACCCAACCCTGCCCTCCTCTTCACCATCAGGTAAGAA  500

seq1  CAAAGGGACCTGAAATCTCAGTGTGTAGCCCAGTGTGAACCCAGTCCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGACCTGAAATCTCAGTGTGTAGCCCAGTGTGAACCCAGTCCCAC  550

seq1  CAGCTTTCCATCACTGAGTCTCAATCCTCAGAGCCACCCTCTGACATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTCCATCACTGAGTCTCAATCCTCAGAGCCACCCTCTGACATTAT  600

seq1  TAACCTGCCTACTGAGCAAATGGGGAAACTGTGTCATGGAGGGGCTCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGCCTACTGAGCAAATGGGGAAACTGTGTCATGGAGGGGCTCAAT  650

seq1  AATGCGGCACAGGAGAAGAGGGATTAAAATTTGGGCTCATGGTAGAGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCGGCACAGGAGAAGAGGGATTAAAATTTGGGCTCATGGTAGAGTGC  700

seq1  TTGCCTAACATACTCAATGCCTTGGGCTCAGCATTCAGCATTGAAAAAAA  750
      |||||||||||||||||||||||||||||||||||||||||||    |||
seq2  TTGCCTAACATACTCAATGCCTTGGGCTCAGCATTCAGCATTG----AAA  746

seq1  AAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAATCAAACCAAACTGAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAATCAAACCAAACTGAAACA  796

seq1  CACACACACACACACACACACACACA-CCCCTCCACCCGTTGAAGCCATA  849
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACCCCCTCCACCCGTTGAAGCCATA  846

seq1  AAATTTCCAAACCCAAGTCCAGCTCTTTCTGTCTTCAC-TTTATCTTCCA  898
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAATTTCCAAACCCAAGTCCAGCTCTTTCTGTCTTCACTTTTATCTTCCA  896

seq1  GGACTGTTTCCAAAGGAATATGCATATTGACTCTTTGACTCTTTGGGATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTTTCCAAAGGAATATGCATATTGACTCTTTGACTCTTTGGGATG  946

seq1  -CTCCAGAGTTGAAAGATTCATTTGCTTTTCAGAGGAAGGAGGGTTCTTG  997
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGAGTTGAAAGATTCATTTGCTTTTCAGAGGAAGGAGGGTTCTTG  996

seq1  CTCATCTATTCTTTGTCCATTTTGGTCTCACAGACACTTGGGATTCTCAG  1047
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  CTCATCTATTCTTTGTCCA-TTTGGTCTCACAGACACTTGGGA-TCTCAG  1044

seq1  -ACTATGAGATATACGTGGGATCCCTGAAGGCTTTATGGCCAGAAGCAAA  1096
       ||||||| |  ||||||||||||||||| ||||||||||||||||| ||
seq2  AACTATGAAAATTACGTGGGATCCCTGAA-GCTTTATGGCCAGAAGC-AA  1092

seq1  ATGATTCAGGAAGAGAAAATAAAACTCATTTTAACTCA  1134
      |||| ||||||||||||||  ||||||||||  |||||
seq2  ATGA-TCAGGAAGAGAAAAATAAACTCATTT--ACTCA  1127