BAC Information

Click to search

BAC

Clone NameB6Ng01-133H14
Chromosome14 (Build37)
Map Location 113,680,981 - 113,801,068
singlet/doubletdoublet
Overlap geneTpm3-rs7
Upstream geneEG223186, LOC100043509
Downstream geneLOC100043510, LOC382947, LOC668791
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133H14.bB6Ng01-133H14.g
ACCDH934011DH934012
length1,0081,119
definitionDH934011|Mus musculus domesticus DNA, BAC clone: B6Ng01-133H14, 5' end.DH934012|Mus musculus domesticus DNA, BAC clone: B6Ng01-133H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,800,426 - 113,801,068)(113,680,981 - 113,682,119)
sequence
gaattccattttgttaattttcgtcatcattcagtgtatcagtagtccat
ttttatgtattgttgaagaaaaattattctaactccttttcaattatgca
ctttaaatcattacgagtatcaataaaaaacaacttaggatataagatgt
taactcctcagaggacaataatcaaaaaatttttttgttctatgtgttgt
tatatctgtcaatggctatgcttgctgtgaataatatatgatatattctc
cttagttttcgttttttttttttttctatgagttgagtcctatacaataa
aacaattccatgacccaaagaaataaactttggttaattaatatttggtt
atgaatgacaaaatcagacagtttgatgaatggagtaaatcctcacacct
gtgaaaaccttagctttgatttataagaaaaaaaaagccagattgtgtga
ttctcttcaggggatttacaggtttgggtcttaaccaacagtctttagtt
ccgtatgaatttgaagtacagaacagggcagttgtccaatgtgtctactt
tataggtgcacacacagcttgctcagcaacacttgataacccacctctca
ttgtgcattattgtcgtatcatctgttacagttgattatttattcatggg
ttgacatcggagccctctgctctgtctcagtagcatatatgttgttctct
attccaagtcaggctgttaaagtggttttggaatgtgttttgaaattcag
aattgtgacagttttaattttgcttatagttcttaaaattgttttatatg
tgtgtagtctgtcgtgattacttgtaaatttaggtttttttaaagtttct
atttccataaaattacttttgagtaaggatgtacattaaatatgaagatt
gggtttggtagtggtgtacatttaacactcctacatatttttactccact
tatataaatgcttgcatttctttttcttgatttttcaaatgatagatttc
agtgtaaa
gaattcatttcctattcttctctgaaccgagaagaaaatttatatattta
attttatatgctattgtacacgtaatgagtttttacaattattaacccat
atccagatgggaaataaaattaacaaataagatatatggatttaatgact
ttaattttgagtaagctctttacttcgctctgtgatagtattgtccatag
tgattgctaagcataaacattttcattatcatgcaaactcacatgggaac
cttcaaagggatgtcaatgttgtgtagtctttctgtggaagaaaagaaac
tatatttaagcatgtccatgaataccctatttacacattgagcttcaaat
atactaaattatatttcagttttgaaactaattagtcgccttctaatatt
tttgactggagaattctagaattacctaacaccatgaatgaagaatttaa
tcttgttttatactatggtctgaatgtatctcaaaattgatgtgttgaca
catagatgtcattgtgatagtgttgacaaaaataaccataattagaactg
actaaataacatgggctctggatttatgaatagatttatatagtgtaaaa
tgactaaagttaccagcctacaccctttgtgttttacatctttcacacaa
tgtgatccatgtttattccatctaaagagcaactatcagttattttggaa
gaaaaaaaagtcaccatcttcagaaactgatcttttgaggacctcaattt
tgtttttcttgtttctgtattattgaaaatatgagtgtctttgttgttat
ttcaataaacatattaacataaagtagcataatgtgctaagataacctac
tttctatcaagggaccaacacattataaagtatacagatgtaatgaacca
atactgttatatgaataaaatagtttaactatagttgtgttaaaaatatt
tatgcttgatactggataaatcatttcacatctcatcttatatatttttc
agtctttatataataacaataaagtcaattgtagtacttcacactagtag
gagaataatgatggtgactcatgttcagagtattaaacctccaaattact
taatggtgattctgctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113800426_113801068
seq2: B6Ng01-133H14.b_45_687 (reverse)

seq1  ATAAATAATCAACTGTAACAGATGATACGACAATAATGCACAATGAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAATCAACTGTAACAGATGATACGACAATAATGCACAATGAGAGG  50

seq1  TGGGTTATCAAGTGTTGCTGAGCAAGCTGTGTGTGCACCTATAAAGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTATCAAGTGTTGCTGAGCAAGCTGTGTGTGCACCTATAAAGTAGA  100

seq1  CACATTGGACAACTGCCCTGTTCTGTACTTCAAATTCATACGGAACTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGGACAACTGCCCTGTTCTGTACTTCAAATTCATACGGAACTAAA  150

seq1  GACTGTTGGTTAAGACCCAAACCTGTAAATCCCCTGAAGAGAATCACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTGGTTAAGACCCAAACCTGTAAATCCCCTGAAGAGAATCACACA  200

seq1  ATCTGGCTTTTTTTTTCTTATAAATCAAAGCTAAGGTTTTCACAGGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCTTTTTTTTTCTTATAAATCAAAGCTAAGGTTTTCACAGGTGTG  250

seq1  AGGATTTACTCCATTCATCAAACTGTCTGATTTTGTCATTCATAACCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTACTCCATTCATCAAACTGTCTGATTTTGTCATTCATAACCAAA  300

seq1  TATTAATTAACCAAAGTTTATTTCTTTGGGTCATGGAATTGTTTTATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTAACCAAAGTTTATTTCTTTGGGTCATGGAATTGTTTTATTGT  350

seq1  ATAGGACTCAACTCATAGAAAAAAAAAAAAAACGAAAACTAAGGAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACTCAACTCATAGAAAAAAAAAAAAAACGAAAACTAAGGAGAATA  400

seq1  TATCATATATTATTCACAGCAAGCATAGCCATTGACAGATATAACAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATATTATTCACAGCAAGCATAGCCATTGACAGATATAACAACAC  450

seq1  ATAGAACAAAAAAATTTTTTGATTATTGTCCTCTGAGGAGTTAACATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACAAAAAAATTTTTTGATTATTGTCCTCTGAGGAGTTAACATCTT  500

seq1  ATATCCTAAGTTGTTTTTTATTGATACTCGTAATGATTTAAAGTGCATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTAAGTTGTTTTTTATTGATACTCGTAATGATTTAAAGTGCATAA  550

seq1  TTGAAAAGGAGTTAGAATAATTTTTCTTCAACAATACATAAAAATGGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGGAGTTAGAATAATTTTTCTTCAACAATACATAAAAATGGACT  600

seq1  ACTGATACACTGAATGATGACGAAAATTAACAAAATGGAATTC  643
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATACACTGAATGATGACGAAAATTAACAAAATGGAATTC  643

seq1: chr14_113680981_113682119
seq2: B6Ng01-133H14.g_67_1185

seq1  GAATTCATTTCCTATTCTTCTCTGAACCGAGAAGAAAATTTATATATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCCTATTCTTCTCTGAACCGAGAAGAAAATTTATATATTTA  50

seq1  ATTTTATATGCTATTGTACACGTAATGAGTTTTTACAATTATTAACCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATATGCTATTGTACACGTAATGAGTTTTTACAATTATTAACCCAT  100

seq1  ATCCAGATGGGAAATAAAATTAACAAATAAGATATATGGATTTAATGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGATGGGAAATAAAATTAACAAATAAGATATATGGATTTAATGACT  150

seq1  TTAATTTTGAGTAAGCTCTTTACTTCGCTCTGTGATAGTATTGTCCATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTGAGTAAGCTCTTTACTTCGCTCTGTGATAGTATTGTCCATAG  200

seq1  TGATTGCTAAGCATAAACATTTTCATTATCATGCAAACTCACATGGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCTAAGCATAAACATTTTCATTATCATGCAAACTCACATGGGAAC  250

seq1  CTTCAAAGGGATGTCAATGTTGTGTAGTCTTTCTGTGGAAGAAAAGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGGGATGTCAATGTTGTGTAGTCTTTCTGTGGAAGAAAAGAAAC  300

seq1  TATATTTAAGCATGTCCATGAATACCCTATTTACACATTGAGCTTCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAAGCATGTCCATGAATACCCTATTTACACATTGAGCTTCAAAT  350

seq1  ATACTAAATTATATTTCAGTTTTGAAACTAATTAGTCGCCTTCTAATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAATTATATTTCAGTTTTGAAACTAATTAGTCGCCTTCTAATATT  400

seq1  TTTGACTGGAGAATTCTAGAATTACCTAACACCATGAATGAAGAATTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTGGAGAATTCTAGAATTACCTAACACCATGAATGAAGAATTTAA  450

seq1  TCTTGTTTTATACTATGGTCTGAATGTATCTCAAAATTGATGTGTTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTTATACTATGGTCTGAATGTATCTCAAAATTGATGTGTTGACA  500

seq1  CATAGATGTCATTGTGATAGTGTTGACAAAAATAACCATAATTAGAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATGTCATTGTGATAGTGTTGACAAAAATAACCATAATTAGAACTG  550

seq1  ACTAAATAACATGGGCTCTGGATTTATGAATAGATTTATATAGTGTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATAACATGGGCTCTGGATTTATGAATAGATTTATATAGTGTAAAA  600

seq1  TGACTAAAGTTACCAGCCTACACCCTTTGTGTTTTACATCTTTCACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAAGTTACCAGCCTACACCCTTTGTGTTTTACATCTTTCACACAA  650

seq1  TGTGATCCATGTTTATTCCATCTAAAGAGCAACTATCAGTTATTTTGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCATGTTTATTCCATCTAAAGAGCAACTATCAGTTATTTTGGAA  700

seq1  G-AAAAAAAGTCACCATCTTCAGAAACTGATCTTTTGAGGACCTCAATTT  749
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAGTCACCATCTTCAGAAACTGATCTTTTGAGGACCTCAATTT  750

seq1  TGTTTTTCTTGTTTCTGTATTATTGAAAATATGAGTGTCTTTGTTGTTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTTGTTTCTGTATTATTGAAAATATGAGTGTCTTTGTTGTTAT  800

seq1  TTCAATAAACATATTAACATAAAGTAGCATAATGTGCTAAGATAACCTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAACATATTAACATAAAGTAGCATAATGTGCTAAGATAACCTAC  850

seq1  TTTCTATCAAGGGACCAACACATTATAAAGTTATACAGATGTAATGAACC  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTCTATCAAGGGACCAACACATTATAAAG-TATACAGATGTAATGAACC  899

seq1  AATACTGTTATATGAATAAAATAGTTTTAACTATAGTTGTGTTAAAAATT  949
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  AATACTGTTATATGAATAAAATAG-TTTAACTATAGTTGTGTTAAAAA-T  947

seq1  ATTTATGCTTGATTACTGGATAAATCATTTCACATCTACATCTTATAATT  999
      |||||||||||| |||||||||||||||||||||||| |||||||||  |
seq2  ATTTATGCTTGA-TACTGGATAAATCATTTCACATCT-CATCTTATA--T  993

seq1  ATTTTTCAGTCTTTAATAATAATAACAATAAAGTCAATTGTTAGTACCTT  1049
      |||||||||||||||   |||||||||||||||||||||| ||||| |||
seq2  ATTTTTCAGTCTTTA--TATAATAACAATAAAGTCAATTG-TAGTA-CTT  1039

seq1  CACACTTAGTTAGGAGAATAATGATGGTGACTTCCATGTTTCAGAGTTAT  1099
      ||||| ||| ||||||||||||||||||||||  |||| ||||||| |||
seq2  CACAC-TAG-TAGGAGAATAATGATGGTGACT--CATG-TTCAGAG-TAT  1083

seq1  AACACCTCCTATATTTACTTAAATGTGGTATTCTGCTGGG  1139
       | ||||||   | ||||||||  |||  |||||||||||
seq2  TAAACCTCC--AAATTACTTAATGGTG--ATTCTGCTGGG  1119