BAC Information

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BAC

Clone NameB6Ng01-133J21
Chromosome14 (Build37)
Map Location 86,154,031 - 86,230,134
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629794, LOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133J21.bB6Ng01-133J21.g
ACCDH934118DH934119
length1,1581,198
definitionDH934118|Mus musculus domesticus DNA, BAC clone: B6Ng01-133J21, 5' end.DH934119|Mus musculus domesticus DNA, BAC clone: B6Ng01-133J21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,154,031 - 86,155,212)(86,228,904 - 86,230,134)
sequence
gaattctgttccattgatctacctgcctgtctctgtacccatactatgca
gtttttattactatttctgtttctaatctactttgtggttttatgctttc
cttttgattgtattcaggccttgaaaatatcctattggctattttctcca
taattacttgcctttttctttcatgtctccatggtttgtggtcatccaca
gaaaatgaaatcatctgccgtttttaagttgaaaaattaatttaaaatat
atcttagtagtttttagaggacataaagtaagatggcatactaataaaag
aataatgtttgtattatataatataaatatatatttcacattatggtttt
caatatgaaaactaaaggagataaaaaaaatatggtgtgtgacaaactga
aactgagtcagaatgtaatgtgatgtaaaatgagatcatgacttcataaa
cataggaaatacaatgctgtggttttgtttgcagaaccagaaaaccatcc
actttaacactgcaaaacatcagcacttctcttcatatgtaatagttgct
aaaataaatcaatgatacatcatattatatataaatgtgtgttaccattc
attcaaattaattggaaccttttatttccactgtgtgttagacctgtctc
tctgagtgactgttaacagtgactagactgtaaggagtgagactactttt
aattctcatttcctatgacatgagccataaacttctatcaagaatttaga
ccctgttctacagaaagaaaatgaaagaaacattttatgtgtattataaa
ggcagacactatatattctataaagaattatttcctcctttcaactatca
ctatttctaatattttctggcacctttgaaaacacccaaataactgttgc
tcagcaaatcctattacacactcaatctgttaggaagcgcccctatcaca
tgcacccaagatgctgtcacacaagttccagcaaacattctaaaaccctg
tgcaaatttacatttatccagagagtcattaacacagcagaagtactcag
gctagtgaatgtcatctgctctctccttccgatgatgctaaattagttta
ccactatcagtcaattatacatacccagatgaattgagtatggtcatcaa
attcccct
gaattcttctaaaaagatatttgagagatgttttaagtctgagaaacact
gccaatgtatggaaatgtggtaccagtagccctgggtttgtgaaaacctt
catggtattatatactgacagttggttgaggacattgcacattggattct
taatcagcaccagcccatcgagtgataatgtatactggacaacttaggcc
agactgttgctagaaggtgctatattatgtaaaaggaggaagggaagtaa
acagcctccagtgttggctgtgttctacatcccagtgagaagtgtaaggc
agtgaagatctttcaaattagctttatatagagacagcgcatcttttaaa
cctgtatatctgcctttctattccaaatttggagctgaacagggacattg
gctcattcctagtcacagccctgagagtgatggcaatgctttgcagggag
aaattatccttgaaaagttacacatcttataggtgagacagtgaggtaca
gaaagatatttgattgattgaaatatatgtaggaaataaatgtcttaatg
tttgacaatatattacagaaggtatttgaaagatttttagatattcagaa
aaaaaaattagttccttgcttccttgtaagtatatgaagactaagggagt
agatacattttgggggcaaacaagtttagtttagggatattttatttgac
aatataaaagtacacacatgtcactatgcatggaacatctttaatacctg
ggagaaggaacaaatggataataattcagtgataattattgaaaacctta
gaacagatttttccttagagagaattactataaaatggaagagctcagaa
acactggtttttgaagcataagcagaaaaatcttcaaattcattaagatc
agagaaataaaaggacaaaatcaaaaatgaagactctaatgtcatggata
tgcatattaatatattatatttatatattttatctatgatatatacaata
ttatatattatctaagtcatcattatttacatctcaaatgatagaccact
ctcagtggcccctcacaagaacccctctatactaaaacttctcttctcct
tttgcctatttggaggtggcctgcaattacacgtctggtccacctctcca
gatcctatactggtactaaacgtcacaggaccattggggcctcccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86154031_86155212
seq2: B6Ng01-133J21.b_49_1206

seq1  GAATTCTGTTCCATTGATCTACCTGCCTGTCTCTGTACCCATACTATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCCATTGATCTACCTGCCTGTCTCTGTACCCATACTATGCA  50

seq1  GTTTTTATTACTATTTCTGTTTCTAATCTACTTTGTGGTTTTATGCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTACTATTTCTGTTTCTAATCTACTTTGTGGTTTTATGCTTTC  100

seq1  CTTTTGATTGTATTCAGGCCTTGAAAATATCCTATTGGCTATTTTCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATTGTATTCAGGCCTTGAAAATATCCTATTGGCTATTTTCTCCA  150

seq1  TAATTACTTGCCTTTTTCTTTCATGTCTCCATGGTTTGTGGTCATCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACTTGCCTTTTTCTTTCATGTCTCCATGGTTTGTGGTCATCCACA  200

seq1  GAAAATGAAATCATCTGCCGTTTTTAAGTTGAAAAATTAATTTAAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAAATCATCTGCCGTTTTTAAGTTGAAAAATTAATTTAAAATAT  250

seq1  ATCTTAGTAGTTTTTAGAGGACATAAAGTAAGATGGCATACTAATAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGTAGTTTTTAGAGGACATAAAGTAAGATGGCATACTAATAAAAG  300

seq1  AATAATGTTTGTATTATATAATATAAATATATATTTCACATTATGGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTTTGTATTATATAATATAAATATATATTTCACATTATGGTTTT  350

seq1  CAATATGAAAACTAAAGGAGATAAAAAAAATATGGTGTGTGACAAACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGAAAACTAAAGGAGATAAAAAAAATATGGTGTGTGACAAACTGA  400

seq1  AACTGAGTCAGAATGTAATGTGATGTAAAATGAGATCATGACTTCATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGTCAGAATGTAATGTGATGTAAAATGAGATCATGACTTCATAAA  450

seq1  CATAGGAAATACAATGCTGTGGTTTTGTTTGCAGAACCAGAAAACCATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAATACAATGCTGTGGTTTTGTTTGCAGAACCAGAAAACCATCC  500

seq1  ACTTTAACACTGCAAAACATCAGCACTTCTCTTCATATGTAATAGTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAACACTGCAAAACATCAGCACTTCTCTTCATATGTAATAGTTGCT  550

seq1  AAAATAAATCAATGATACATCATATTATATATAAATGTGTGTTACCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATCAATGATACATCATATTATATATAAATGTGTGTTACCATTC  600

seq1  ATTCAAATTAATTGGAACCTTTTATTTCCACTGTGTGTTAGACCTGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATTAATTGGAACCTTTTATTTCCACTGTGTGTTAGACCTGTCTC  650

seq1  TCTGAGTGACTGTTAACAGTGACTAGACTGTAAGGAGTGAGACTACTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTGACTGTTAACAGTGACTAGACTGTAAGGAGTGAGACTACTTTT  700

seq1  AATTCTCATTTCCTATGACATGAGCCATAAACTTCTATCAAGAATTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCATTTCCTATGACATGAGCCATAAACTTCTATCAAGAATTTAGA  750

seq1  CCCTGTTCTACAGAAAGAAAATGAAAGAAACATTTTATGTGTATTATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCTACAGAAAGAAAATGAAAGAAACATTTTATGTGTATTATAAA  800

seq1  GGCAGACACTATATATTCTATAAAGAATTATTTCCTCCTTTCAACTATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACACTATATATTCTATAAAGAATTATTTCCTCCTTTCAACTATCA  850

seq1  CTATTTCTAATATTTTCTGGCACCTTTGAAAACACCCAAATAACTGTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTAATATTTTCTGGCACCTTTGAAAACACCCAAATAACTGTTGC  900

seq1  TCAGCAAATCCTATTACACACTCAATCTGTTAGGAAGCGCCCCTATCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAATCCTATTACACACTCAATCTGTTAGGAAGCGCCCCTATCACA  950

seq1  TGCACCCAAGATGCTGTCAACACAAGTTCCAGCAAACATTCTAAAACCCT  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGCACCCAAGATGCTGTC-ACACAAGTTCCAGCAAACATTCTAAAACCCT  999

seq1  GTGCAAATTTACATTTATCCAAGAGAGTCATTAACACAGCCAGAAGGTAC  1050
      |||||||||||||||||||| |||||||||||||||||| ||||| ||||
seq2  GTGCAAATTTACATTTATCC-AGAGAGTCATTAACACAG-CAGAA-GTAC  1046

seq1  TCCAGGCTAGTGAAATGGCCAATTCTGCCTCTCTCCTTTCCAGATGATGC  1100
      | |||||||||| |||| |    |||| ||||||||||  | ||||||||
seq2  T-CAGGCTAGTG-AATGTC---ATCTG-CTCTCTCCTT--CCGATGATGC  1088

seq1  TAAATAAGTTTACCCACTATCAGTTCCAAATAATTACATACCCAGTATGA  1150
      ||||| |||||| |||||||||||  ||| ||  ||||||||||| ||||
seq2  TAAATTAGTTTA-CCACTATCAGT--CAATTA--TACATACCCAG-ATGA  1132

seq1  GATTTTGAGTTATGTTCATCAATAATTCCCCT  1182
          ||||| |||| ||||||  |||||||||
seq2  ---ATTGAG-TATGGTCATCA--AATTCCCCT  1158

seq1: chr14_86228904_86230134
seq2: B6Ng01-133J21.g_64_1261 (reverse)

seq1  GAGGGGAGGCCC--ATGGTCCTGTGGCAGTTTGATGCACCAGTATAGGGG  48
      ||||||||||||  ||||||||||| | ||||   | |||||||||   |
seq2  GAGGGGAGGCCCCAATGGTCCTGTGAC-GTTT--AGTACCAGTATA---G  44

seq1  GATGCTGGAGGAGTGGGACAGAAGAGGGTGGGTGAGTGGGCAAG-CACAC  97
      ||| ||||||  ||||  ||||       | || | |  ||| | |||  
seq2  GAT-CTGGAGAGGTGGACCAGA------CGTGTAATT--GCAGGCCACCT  85

seq1  TCATATAGGCAAAAGGGAGAAGAAGGAGGTTGTAGTATAGGAGGGGTCTT  147
       || |||||||||| ||||||||  || ||| ||||||||  ||| ||||
seq2  CCAAATAGGCAAAA-GGAGAAGA--GAAGTTTTAGTATAGAGGGGTTCTT  132

seq1  GTGGAGGGGCAACTGAGAAGTGGTCTATCATTTGAGATGTAAATAAATTG  197
      || ||||||| |||||| ||||||||||||||||||||||||||||  ||
seq2  GT-GAGGGGCCACTGAG-AGTGGTCTATCATTTGAGATGTAAATAA--TG  178

seq1  AATGACTTAGATAATA-ATAATAAATATGTATA-ATAATAAATAGATAAA  245
       ||||||||||||||| ||||||    |||||| || ||| ||     ||
seq2  -ATGACTTAGATAATATATAATA---TTGTATATATCATAGAT-----AA  219

seq1  AATAATAATAAATAATAATATAATTAAATATGCATATCCATGACATTAGA  295
      ||||   |||||| ||||||||  | ||||||||||||||||||||||||
seq2  AATA--TATAAAT-ATAATATA--TTAATATGCATATCCATGACATTAGA  264

seq1  GTCTTCATTTTTGATTTTGTCCTTTTTATTTCTCTGATCTTAATGAATTT  345
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  GTCTTCATTTTTGATTTTGTCC-TTTTATTTCTCTGATCTTAATGAA-TT  312

seq1  TGAAGATTTTTCTGCTTATGCTTCAAAAACCAGTGTTTCTGAGCTCTTCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTTTTCTGCTTATGCTTCAAAAACCAGTGTTTCTGAGCTCTTCC  362

seq1  ATTTTATAGTAATTCTCTCTAAGGAAAAATCTGTTCTAAGGTTTTCAATA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATAGTAATTCTCTCTAAGGAAAAATCTGTTCTAAGGTTTTCAATA  412

seq1  ATTATCACTGAATTATTATCCATTTGTTCCTTCTCCCAGGTATTAAAGAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCACTGAATTATTATCCATTTGTTCCTTCTCCCAGGTATTAAAGAT  462

seq1  GTTCCATGCATAGTGACATGTGTGTACTTTTATATTGTCAAATAAAATAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATGCATAGTGACATGTGTGTACTTTTATATTGTCAAATAAAATAT  512

seq1  CCCTAAACTAAACTTGTTTGCCCCCAAAATGTATCTACTCCCTTAGTCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAACTAAACTTGTTTGCCCCCAAAATGTATCTACTCCCTTAGTCTT  562

seq1  CATATACTTACAAGGAAGCAAGGAACTAATTTTTTTTTCTGAATATCTAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTTACAAGGAAGCAAGGAACTAATTTTTTTTTCTGAATATCTAA  612

seq1  AAATCTTTCAAATACCTTCTGTAATATATTGTCAAACATTAAGACATTTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTCAAATACCTTCTGTAATATATTGTCAAACATTAAGACATTTA  662

seq1  TTTCCTACATATATTTCAATCAATCAAATATCTTTCTGTACCTCACTGTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTACATATATTTCAATCAATCAAATATCTTTCTGTACCTCACTGTC  712

seq1  TCACCTATAAGATGTGTAACTTTTCAAGGATAATTTCTCCCTGCAAAGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTATAAGATGTGTAACTTTTCAAGGATAATTTCTCCCTGCAAAGCA  762

seq1  TTGCCATCACTCTCAGGGCTGTGACTAGGAATGAGCCAATGTCCCTGTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATCACTCTCAGGGCTGTGACTAGGAATGAGCCAATGTCCCTGTTC  812

seq1  AGCTCCAAATTTGGAATAGAAAGGCAGATATACAGGTTTAAAAGATGCGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCAAATTTGGAATAGAAAGGCAGATATACAGGTTTAAAAGATGCGC  862

seq1  TGTCTCTATATAAAGCTAATTTGAAAGATCTTCACTGCCTTACACTTCTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTATATAAAGCTAATTTGAAAGATCTTCACTGCCTTACACTTCTC  912

seq1  ACTGGGATGTAGAACACAGCCAACACTGGAGGCTGTTTACTTCCCTTCCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGATGTAGAACACAGCCAACACTGGAGGCTGTTTACTTCCCTTCCT  962

seq1  CCTTTTACATAATATAGCACCTTCTAGCAACAGTCTGGCCTAAGTTGTCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTACATAATATAGCACCTTCTAGCAACAGTCTGGCCTAAGTTGTCC  1012

seq1  AGTATACATTATCACTCGATGGGCTGGTGCTGATTAAGAATCCAATGTGC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACATTATCACTCGATGGGCTGGTGCTGATTAAGAATCCAATGTGC  1062

seq1  AATGTCCTCAACCAACTGTCAGTATATAATACCATGAAGGTTTTCACAAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCTCAACCAACTGTCAGTATATAATACCATGAAGGTTTTCACAAA  1112

seq1  CCCAGGGCTACTGGTACCACATTTCCATACATTGGCAGTGTTTCTCAGAC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGCTACTGGTACCACATTTCCATACATTGGCAGTGTTTCTCAGAC  1162

seq1  TTAAAACATCTCTCAAATATCTTTTTAGAAGAATTC  1231
      ||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATCTCTCAAATATCTTTTTAGAAGAATTC  1198