BAC Information

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BAC

Clone NameB6Ng01-134E16
Chromosome14 (Build37)
Map Location 102,288,410 - 102,449,193
singlet/doubletdoublet
Overlap geneLmo7, LOC100043795, LOC545567
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3
Downstream geneLOC669278, Kctd12, LOC668699, Irg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134E16.bB6Ng01-134E16.g
ACCDH934627DH934628
length9431,089
definitionDH934627|Mus musculus domesticus DNA, BAC clone: B6Ng01-134E16, 5' end.DH934628|Mus musculus domesticus DNA, BAC clone: B6Ng01-134E16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,448,251 - 102,449,193)(102,288,410 - 102,289,503)
sequence
gaattcaccattccaaaaagaagtcaaatactacagactttcctgcatcc
caagtcatcttgatgtagtgaagagaggcatatagaaaactattatttat
ctcacagtgaatattgtgctattaatttagctctgtgggatttggtacat
ttaacacaaatagggtggggggaaccccacatcatctgagactaacaatc
tgaagttcagagtagcataagtgtcatcacctgctggtcaaagctgggtg
caatctcaaatccctttggactcaggagggacaggatcacctcactgcct
ctgcaccccactctctttcacccaatacaggattttgttcttttgaactc
atcaagccctggactcagggtgcttgacacatcacccatctggctaagtt
attcaatgacaccatcacatgtggcatatctattgctggtcagtgcaggt
tccactccagaaaatcctaagtagaattcctcattgtcttccatcatttg
gcctgcttgcctcttttaattaataattatgtatttttcaattcactctc
aatatttcattgttcctgtcagaacaaaacaacaaggatcttgtctaaga
tacatccagtacatttgccaaatcaaaaataagcattacaatgctatcta
attaatgattgtcaatctaatatcccagtgtggggggctaagatcagcaa
gtgaaagtgttatgtcaaatgggatatttacatagacacaatatattctc
caacacacacaaagcaaaatagtaattttacaatagaacaacctggcaaa
taacactttaacagggagattaacatcctctgtagtgaaaccaattaaca
ccatacacctgctgacttagaccccatgctgctatattatccattcccaa
acccaacccccccccgggggggcgtggcgggggggggggggaa
gaattcacacacttagctcctgaggaattttattagtgggcacagttaat
agttttaggagatatttccaagattcttgattacggtagaaattttactg
taatgtagctgcctataaagaacaaactagactttcaaaactataaaaag
taatcttggtcatttccaatattgttacaagaaatatatttaaattattt
cgcaggtttggtctaccggtatttaaaattcagtggataaacatgtcaat
gtaatataaatctgattgtctcacgtgttttcccagttctagactatttt
aagttgttattcattctcaatgcagttttacctggctttctgtaactgaa
atcaattggtaatagtttttgaggaggagaggtgaaggacactcaatatt
ttaatcagactcaggagttgtccccttaccatagtttgtctaatctctct
gaacctctaagtttaacggtatttaatagtgttaatagtttggaaacttt
agaagctaccaagattgtcaacagaattcaccgtaagaactctagatgtt
gaagacacgactgagggataggcagctattgccgttacccttcccagtgt
ggcgtttgagggggaagaaattagtttttggcataacccttcgatatctg
ttcatcagttcattgcaggaaagctgttttaacttgatttaaaatcccct
tgaagcttcaagcatcctgactaactttcatgaggaatgttcatttggct
ttgtagcataaacatatctctaaaataggttaccaaaagggggtctaaaa
atacccagagagtaaatacttgggaggtgtgtagtaaagcatgtaactac
ctctgacttggccctacctgttttttcttagaagtatcagttgtgatgtg
acttgaatttcccagggcagagtgggtttcatggtagaattcatgcctag
cttgctcgaggctatagttcggttccagtaactatgcacccaaccttacc
acagacaccataaagagaatgtaacatccaactcaaaatgctgaggatct
tttctaactgaccagtcggcagcaaatgccttccagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102448251_102449193
seq2: B6Ng01-134E16.b_45_987 (reverse)

seq1  -TTCCCCCCCCCCCCGCCACGCCCCCCCGGGGGGGGGGTTGGGTTTGGGA  49
       | ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCCCCCCCCCCCCCGCCACGCCCCCCC-GGGGGGGGGTTGGGTTTGGGA  49

seq1  ATGGATAATATAGCAGCATGGGGTCTAAGTCAGCAGGTGTATGGTGTTAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAATATAGCAGCATGGGGTCTAAGTCAGCAGGTGTATGGTGTTAA  99

seq1  TTGGTTTCACTACAGAGGATGTTAATCTCCCTGTTAAAGTGTTATTTGCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTCACTACAGAGGATGTTAATCTCCCTGTTAAAGTGTTATTTGCC  149

seq1  AGGTTGTTCTATTGTAAAATTACTATTTTGCTTTGTGTGTGTTGGAGAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTTCTATTGTAAAATTACTATTTTGCTTTGTGTGTGTTGGAGAAT  199

seq1  ATATTGTGTCTATGTAAATATCCCATTTGACATAACACTTTCACTTGCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTGTCTATGTAAATATCCCATTTGACATAACACTTTCACTTGCTG  249

seq1  ATCTTAGCCCCCCACACTGGGATATTAGATTGACAATCATTAATTAGATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGCCCCCCACACTGGGATATTAGATTGACAATCATTAATTAGATA  299

seq1  GCATTGTAATGCTTATTTTTGATTTGGCAAATGTACTGGATGTATCTTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTAATGCTTATTTTTGATTTGGCAAATGTACTGGATGTATCTTAG  349

seq1  ACAAGATCCTTGTTGTTTTGTTCTGACAGGAACAATGAAATATTGAGAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATCCTTGTTGTTTTGTTCTGACAGGAACAATGAAATATTGAGAGT  399

seq1  GAATTGAAAAATACATAATTATTAATTAAAAGAGGCAAGCAGGCCAAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAAAAATACATAATTATTAATTAAAAGAGGCAAGCAGGCCAAATG  449

seq1  ATGGAAGACAATGAGGAATTCTACTTAGGATTTTCTGGAGTGGAACCTGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGACAATGAGGAATTCTACTTAGGATTTTCTGGAGTGGAACCTGC  499

seq1  ACTGACCAGCAATAGATATGCCACATGTGATGGTGTCATTGAATAACTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCAGCAATAGATATGCCACATGTGATGGTGTCATTGAATAACTTA  549

seq1  GCCAGATGGGTGATGTGTCAAGCACCCTGAGTCCAGGGCTTGATGAGTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATGGGTGATGTGTCAAGCACCCTGAGTCCAGGGCTTGATGAGTTC  599

seq1  AAAAGAACAAAATCCTGTATTGGGTGAAAGAGAGTGGGGTGCAGAGGCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACAAAATCCTGTATTGGGTGAAAGAGAGTGGGGTGCAGAGGCAG  649

seq1  TGAGGTGATCCTGTCCCTCCTGAGTCCAAAGGGATTTGAGATTGCACCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGATCCTGTCCCTCCTGAGTCCAAAGGGATTTGAGATTGCACCCA  699

seq1  GCTTTGACCAGCAGGTGATGACACTTATGCTACTCTGAACTTCAGATTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGACCAGCAGGTGATGACACTTATGCTACTCTGAACTTCAGATTGT  749

seq1  TAGTCTCAGATGATGTGGGGTTCCCCCCACCCTATTTGTGTTAAATGTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCAGATGATGTGGGGTTCCCCCCACCCTATTTGTGTTAAATGTAC  799

seq1  CAAATCCCACAGAGCTAAATTAATAGCACAATATTCACTGTGAGATAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCACAGAGCTAAATTAATAGCACAATATTCACTGTGAGATAAAT  849

seq1  AATAGTTTTCTATATGCCTCTCTTCACTACATCAAGATGACTTGGGATGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTTCTATATGCCTCTCTTCACTACATCAAGATGACTTGGGATGC  899

seq1  AGGAAAGTCTGTAGTATTTGACTTCTTTTTGGAATGGTGAATTC  943
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTCTGTAGTATTTGACTTCTTTTTGGAATGGTGAATTC  943

seq1: chr14_102288410_102289503
seq2: B6Ng01-134E16.g_70_1158

seq1  GAATTCACACACTTAGCTCCTGAGGAATTTTATTAGTGGGCACAGTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACACTTAGCTCCTGAGGAATTTTATTAGTGGGCACAGTTAAT  50

seq1  AGTTTTAGGAGATATTTCCAAGATTCTTGATTACGGTAGAAATTTTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGGAGATATTTCCAAGATTCTTGATTACGGTAGAAATTTTACTG  100

seq1  TAATGTAGCTGCCTATAAAGAACAAACTAGACTTTCAAAACTATAAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAGCTGCCTATAAAGAACAAACTAGACTTTCAAAACTATAAAAAG  150

seq1  TAATCTTGGTCATTTCCAATATTGTTACAAGAAATATATTTAAATTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTGGTCATTTCCAATATTGTTACAAGAAATATATTTAAATTATTT  200

seq1  CGCAGGTTTGGTCTACCGGTATTTAAAATTCAGTGGATAAACATGTCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGTTTGGTCTACCGGTATTTAAAATTCAGTGGATAAACATGTCAAT  250

seq1  GTAATATAAATCTGATTGTCTCACGTGTTTTCCCAGTTCTAGACTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATAAATCTGATTGTCTCACGTGTTTTCCCAGTTCTAGACTATTTT  300

seq1  AAGTTGTTATTCATTCTCAATGCAGTTTTACCTGGCTTTCTGTAACTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTATTCATTCTCAATGCAGTTTTACCTGGCTTTCTGTAACTGAA  350

seq1  ATCAATTGGTAATAGTTTTTGAGGAGGAGAGGTGAAGGACACTCAATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTGGTAATAGTTTTTGAGGAGGAGAGGTGAAGGACACTCAATATT  400

seq1  TTAATCAGACTCAGGAGTTGTCCCCTTACCATAGTTTGTCTAATCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGACTCAGGAGTTGTCCCCTTACCATAGTTTGTCTAATCTCTCT  450

seq1  GAACCTCTAAGTTTAACGGTATTTAATAGTGTTAATAGTTTGGAAACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCTAAGTTTAACGGTATTTAATAGTGTTAATAGTTTGGAAACTTT  500

seq1  AGAAGCTACCAAGATTGTCAACAGAATTCACCGTAAGAACTCTAGATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTACCAAGATTGTCAACAGAATTCACCGTAAGAACTCTAGATGTT  550

seq1  GAAGACACGACTGAGGGATAGGCAGCTATTGCCGTTACCCTTCCCAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACACGACTGAGGGATAGGCAGCTATTGCCGTTACCCTTCCCAGTGT  600

seq1  GGCGTTTGAGGGGGAAGAAATTAGTTTTTGGCATAACCCTTCGATATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTTGAGGGGGAAGAAATTAGTTTTTGGCATAACCCTTCGATATCTG  650

seq1  TTCATCAGTTCATTGCAGGAAAGCTGTTTTAACTTGATTTAAAATCCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGTTCATTGCAGGAAAGCTGTTTTAACTTGATTTAAAATCCCCT  700

seq1  TGAAGCTTCAAGCATCCTGACTAACTTTCATGAGGAATGTTCATTTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTCAAGCATCCTGACTAACTTTCATGAGGAATGTTCATTTGGCT  750

seq1  TTGTAGCATAAACATATCTCTAAAATAGGTTACCAAAAGGGGGTCTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCATAAACATATCTCTAAAATAGGTTACCAAAAGGGGGTCTAAAA  800

seq1  ATACCCAGAGAGTAAATACTT-GGAGGTGTGTAGT-AAGCATGTAACTAC  848
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  ATACCCAGAGAGTAAATACTTGGGAGGTGTGTAGTAAAGCATGTAACTAC  850

seq1  CTCTGACTTGGCCCTACCTGTTTTTTCTTAG-AGTATCAGTTGTGATGTG  897
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTCTGACTTGGCCCTACCTGTTTTTTCTTAGAAGTATCAGTTGTGATGTG  900

seq1  ACTTGAATTTCCCAGGGCAAGAGTGGGTTTCATGGTAGAATTCATGCCTA  947
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTTGAATTTCCCAGGGC-AGAGTGGGTTTCATGGTAGAATTCATGCCTA  949

seq1  GCTTGCCCGAGGCTATAGGTTCGGTTCCCAGT-ACTATGCACCCACCCTT  996
      |||||| |||||||||| |||||||| ||||| |||||||||||| ||||
seq2  GCTTGCTCGAGGCTATA-GTTCGGTT-CCAGTAACTATGCACCCAACCTT  997

seq1  ACCACAGACACCCATAAAGAAAATGTAAACATCCAACCTCAAAATGCTGA  1046
      |||||||||| ||||||||| ||||| ||||||||| |||||||||||| 
seq2  ACCACAGACA-CCATAAAGAGAATGT-AACATCCAA-CTCAAAATGCTG-  1043

seq1  AGGATCTTTTTCTTAACTGTACCAGTCGGCAGCACATG-CTTCCAGTCA  1094
      ||||||||||   |||||| |||||||||||||| ||| ||||||||||
seq2  AGGATCTTTT--CTAACTG-ACCAGTCGGCAGCAAATGCCTTCCAGTCA  1089