BAC Information

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BAC

Clone NameB6Ng01-136E03
Chromosome14 (Build37)
Map Location 43,434,972 - 43,436,074
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik
Downstream geneEG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136E03.bB6Ng01-136E03.g
ACCDH936078DH936079
length1,2811,091
definitionDH936078|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E03, 5' end.DH936079|Mus musculus domesticus DNA, BAC clone: B6Ng01-136E03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagacactacaatttgaggagtatgggatattatacataagtga
gccccaaaaaatccaggagagaactcctacagctgataaaccacttcagc
aaagtcaattaatataaaattaactcgaacaatcgaggaactttcctcta
ctcaaaggataattaggatgaggaagagatttttaaaaactacatacttc
acaatagtcacaaacaatatctaggtgtgattcgaacaaagcaaggcaaa
gatcagaatgacaagaacattaagtctctgaacaaagaaatcaaagaaga
ccgtagaagatggaaagatctcccatggtcattgatgagcaggattaata
tagtaaaaaaggtccatctcgccaaaagcaatctacggattcaatgcaat
ccccatcacaattccaactcattccttcacagagatagaaaaagctattc
tcaaatttatctggaataacatatatcccagtatagcaaaaactattctt
aacaataaaacaatggctggggaaatcaccatccctgatctcaaaatata
ccacagggcaatagtgataaaaatgtcatgtttctggtatagagagacaa
gtagaccaacagaatagaattgaagacctagaaatgaacctacactcata
tggtcacttgatctttgtccaaggagcaaaaaccatccagtggataaaag
acagcattttcaacaattggtgcttgttcaactggcagtctgcatataga
agaatgcaaattgatgtattcttatctccttgtacaaagctcaagtccaa
gtcactcaaggacctccacgtaaaacaagatacattgaatctaatacaag
agagagcagtaaagaacctcaaatacattgtcacaggggaaatgttcctg
tacaggacaccaatgactcatgctgtaggaacaaaacattgtcaaatagg
atcccataaaattgaaaagctttgtaagtcaaaggatgctgtcaaggaca
aaattgcacacacatatagggaaaacttctgtacaaccctacgtctgata
gcgggctaatatccaaaatattacaaagaattcagaaggttactctccgg
aatcctataacctattaagaatggggtacagagctaacagaaaattctca
ctgatgatcttgatggctgaaagtacttagaagttccactctttagtctt
cagatgtcaatcaattgactaagtccattcagactcgaatggcagaacaa
actacctgccgggattctggcagagtggtag
gaattcacatgatccttggggcctgtgtcatggagtagcttcagtgacta
gaagaatgggttagatttatttcctatactcaaagcagaaaaggatgaaa
gtcctccatgtaatatcaaatatatccagaagagggtgctagatcctcag
tacccaaagtatccagaagatgggataagacagattgccatccagtacca
aagtcatccagagagcatcttaagatcaaagtcagcttgtgttttacccc
taggagcaaggaggaggaatctacctcctgatgccctcttctgacagtca
gaatgaaattaaggagctcttgcagagcaggtgcagccttgacaagtcct
gctctctatcaaacaaactgcttcccagaagctccaagctccaattccca
ttactggaagtccaagctcaagcccaccttctctaggaagctcactcttt
catgcccaggattcacagtgacttcctccggaccattaattcttgctctt
taacactaagactgaaggccatcttgtggctgcctctttctggtctctgt
attttcattgttctctcctccaagaggcctgttcagttttgtcaacatgt
ctaagggggaactataaaggtagttaatgaatgctccaagagcagttgga
gtcaccataacattagtaacatcacagaaaatgccagggctctccaggtt
acaacacaacatctagggaagggacttctgatgtcacacaggtcagctct
taccttcctgctcagtacctcacccaaattgacctgaagtcaaagtgcct
tttccagagagtgggatagattgccttttggtactcaaaatattaaaagg
tggctatcaatcaccttccaatgacaaacgtatccagaagagatcctttg
gatccccatgcaaatacacatgaaatacccagactccagaatagacacta
ggcatactgacacatctagataaagtgtgatagatccccttgcagtactg
aaactatccagaagaggtcatacccgttcagcagttctatctgcgatgac
tgacctgacagatgaatgtcaccacctattgacaaagtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43434972_43436074
seq2: B6Ng01-136E03.g_69_1159

seq1  GAATTCACATGATCCTTGGGGCCTGTGTCATGGAGTAGCTTCAGTGACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGATCCTTGGGGCCTGTGTCATGGAGTAGCTTCAGTGACTA  50

seq1  GAAGAATGGGTTAGATTTATTTCCTATACTCAAAGCAGAAAAGGATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGGGTTAGATTTATTTCCTATACTCAAAGCAGAAAAGGATGAAA  100

seq1  GTCCTCCATGTAATATCAAATATATCCAGAAGAGGGTGCTAGATCCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCATGTAATATCAAATATATCCAGAAGAGGGTGCTAGATCCTCAG  150

seq1  TACCCAAAGTATCCAGAAGATGGGATAAGACAGATTGCCATCCAGTACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAAAGTATCCAGAAGATGGGATAAGACAGATTGCCATCCAGTACCA  200

seq1  AAGTCATCCAGAGAGCATCTTAAGATCAAAGTCAGCTTGTGTTTTACCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATCCAGAGAGCATCTTAAGATCAAAGTCAGCTTGTGTTTTACCCC  250

seq1  TAGGAGCAAGGAGGAGGAATCTACCTCCTGATGCCCTCTTCTGACAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCAAGGAGGAGGAATCTACCTCCTGATGCCCTCTTCTGACAGTCA  300

seq1  GAATGAAATTAAGGAGCTCTTGCAGAGCAGGTGCAGCCTTGACAAGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAATTAAGGAGCTCTTGCAGAGCAGGTGCAGCCTTGACAAGTCCT  350

seq1  GCTCTCTATCAAACAAACTGCTTCCCAGAAGCTCCAAGCTCCAATTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTATCAAACAAACTGCTTCCCAGAAGCTCCAAGCTCCAATTCCCA  400

seq1  TTACTGGAAGTCCAAGCTCAAGCCCACCTTCTCTAGGAAGCTCACTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGAAGTCCAAGCTCAAGCCCACCTTCTCTAGGAAGCTCACTCTTT  450

seq1  CATGCCCAGGATTCACAGTGACTTCCTCCGGACCATTAATTCTTGCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCAGGATTCACAGTGACTTCCTCCGGACCATTAATTCTTGCTCTT  500

seq1  TAACACTAAGACTGAAGGCCATCTTGTGGCTGCCTCTTTCTGGTCTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTAAGACTGAAGGCCATCTTGTGGCTGCCTCTTTCTGGTCTCTGT  550

seq1  ATTTTCATTGTTCTCTCCTCCAAGAGGCCTGTTCAGTTTTGTCAACATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATTGTTCTCTCCTCCAAGAGGCCTGTTCAGTTTTGTCAACATGT  600

seq1  CTAAGGGGGAACTATAAAGGTAGTTAATGAATGCTCCAAGAGCAGTTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGGGAACTATAAAGGTAGTTAATGAATGCTCCAAGAGCAGTTGGA  650

seq1  GTCACCATAACATTAGTAACATCACAGAAAATGCCAGGGCTCTCCAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCATAACATTAGTAACATCACAGAAAATGCCAGGGCTCTCCAGGTT  700

seq1  ACAACACAACATCTAGGGAAGGGACTTCTGATGTCACACAGGTCAGCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACAACATCTAGGGAAGGGACTTCTGATGTCACACAGGTCAGCTCT  750

seq1  TACCTTCCTGCTCAGTACCTCACCCAAATTGACCTGAAGTCAAAGTGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCCTGCTCAGTACCTCACCCAAATTGACCTGAAGTCAAAGTGCCT  800

seq1  TTTCCAGAGAGTGGGATAGATTGCCTTTTGGTACTCAAAATATTAAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAGAGTGGGATAGATTGCCTTTTGGTACTCAAAATATTAAAAGG  850

seq1  TGGCTATCAATCACCTTCCAATGACAAACGTATCCAGAAGAGATCCTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATCAATCACCTTCCAATGACAAACGTATCCAGAAGAGATCCTTTG  900

seq1  GATCCCCATGCAAATACACATGAAATACCCAGACTCCAGAATAAGACACT  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATCCCCATGCAAATACACATGAAATACCCAGACTCCAGAAT-AGACACT  949

seq1  AGGCAATACTGAACACATCTAGATAAAGTGTGATAGATCCCCTTGCAGTA  1000
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGGC-ATACTG-ACACATCTAGATAAAGTGTGATAGATCCCCTTGCAGTA  997

seq1  CTGAAACTATCCAGAAGAGGTCAATACCCGTCCAGCCAGTTTCTATGCTG  1050
      |||||||||||||||||||||| |||||||| ||| ||| |||||| |||
seq2  CTGAAACTATCCAGAAGAGGTC-ATACCCGTTCAG-CAG-TTCTAT-CTG  1043

seq1  CGATGACTGACCTGGACAGAATGGAAAATGTCACCA-CTATTGACCAAAG  1099
      ||||||||||||| ||||| |||   |||||||||| ||||||| |||||
seq2  CGATGACTGACCT-GACAG-ATG---AATGTCACCACCTATTGA-CAAAG  1087

seq1  TATG  1103
      ||||
seq2  TATG  1091