BAC Information

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BAC

Clone NameB6Ng01-138H04
Chromosome14 (Build37)
Map Location 46,768,575 - 46,887,538
singlet/doubletdoublet
Overlap genenone
Upstream gene5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963
Downstream geneLOC100041724, Bmp4, LOC100041732, LOC100041754, Cdkn3, Cnih, Gmfb, Cgrrf1, Samd4, Gch1, Wdhd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138H04.bB6Ng01-138H04.g
ACCDH937707DH937708
length5761,141
definitionDH937707|Mus musculus domesticus DNA, BAC clone: B6Ng01-138H04, 5' end.DH937708|Mus musculus domesticus DNA, BAC clone: B6Ng01-138H04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,886,957 - 46,887,538)(46,768,575 - 46,769,739)
sequence
cactctattcccagtttatactccctggggcaattattaggtacaaaatt
aaattaggataggtgaatgtcaagactggggagggattatatgcaaatga
ggttccaaatgacataaaaataaactttaaaaaaattaactagccaacct
cagaaagatccatccctgttctaagccagaaggcttctcccatagagaac
ccacctgcattatttttgtactgaagtttcagctttaccttggaaatggt
catcccctttgagtttacttccagttggtaagtagatatgcatttaacag
atattccttctgtttgacacttgcaaaccttatgagatagacacttttta
tattgggttctttattctctagccttattttgaatatatattatttactg
ataaaaagaagacaggaataagaagagaatacttggatctcagtagggcc
ctgtgttctctgtgccccatagaacacaggaacatctaacggaattattg
gtagcctaccattttatatatatatatatatatatatatatacatatata
tgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcagagtaaatgggctttcagttctgttttagattccagattccca
gattctcatacctggaaatcattcctttgggggcatatgagatctttttc
tcccctttgcttctttcaaagttttaaaaatttattattattattatctg
tctgtctgtctgtgtctgtgtctcactctgtgtgtctgtgtgagtacaga
gtggttataaacaggttacttatgttatggttaatgttactgtttttgca
tctgattaaggggaaaatctttcccctgccatcgtgggcttggtgccatt
ttatcatcttgaaatgattcatctctccatctgctctgctttataagaac
tcttgaagggaaataatgtaggccagagttttagtggggcaacaaaagcc
ttttacatggtagagagagagaatcacccggccacagttcccaggttgca
gctttgtgtcgggagctctggttaacgcctcctttgcaatcctgagttgg
cggagaaagaaacagggcccattggataagctgagctccacacttgaaca
tggaatagacagcttgttcagtagcagcatcagcatatggtggctgcatc
ttctaggcattccccatttgggggatgggcatgatctcagaagctctttg
attttactgtagtggaggggcatctccatttgtcctggggcccacaagag
atcagcgaatgaatactccaagaagaccctcctctacctggggctcttat
ggtagcttctgacaagctttgggtcaccttgactagccaggttttctcct
atctattccatcttctttaagctttgtccacttccatgtctgaaaatcta
ttataggcctgtggggctaggaaggaggtagagttgagatggaaatgact
tcagaaaaaattgttccttactttcctcaccactgtgagaaaatacccag
atgaagtgttttgtagagaaggtttctctgtttgtctcatgtctgtcatg
ggaggaagacaatggtaagatggcataagtccgggcatgactagtgtatg
atggttcatatcttgatggacagagcaagagcgaactagaccgaaatctc
tctggctggtactctacccacctttcagcctagctagtcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_46886957_46887538
seq2: B6Ng01-138H04.b_47_628 (reverse)

seq1  CACACACACACACACACACACACACATATATATGTATATATATATATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACATATATATGTATATATATATATATA  50

seq1  TATATATATATAAAATGGTAGGCTACCAATAATTCCGTTAGATGTTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATAAAATGGTAGGCTACCAATAATTCCGTTAGATGTTCCTG  100

seq1  TGTTCTATGGGGCACAGAGAACACAGGGCCCTACTGAGATCCAAGTATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATGGGGCACAGAGAACACAGGGCCCTACTGAGATCCAAGTATTC  150

seq1  TCTTCTTATTCCTGTCTTCTTTTTATCAGTAAATAATATATATTCAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTATTCCTGTCTTCTTTTTATCAGTAAATAATATATATTCAAAAT  200

seq1  AAGGCTAGAGAATAAAGAACCCAATATAAAAAGTGTCTATCTCATAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTAGAGAATAAAGAACCCAATATAAAAAGTGTCTATCTCATAAGGT  250

seq1  TTGCAAGTGTCAAACAGAAGGAATATCTGTTAAATGCATATCTACTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGTGTCAAACAGAAGGAATATCTGTTAAATGCATATCTACTTACC  300

seq1  AACTGGAAGTAAACTCAAAGGGGATGACCATTTCCAAGGTAAAGCTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAGTAAACTCAAAGGGGATGACCATTTCCAAGGTAAAGCTGAAA  350

seq1  CTTCAGTACAAAAATAATGCAGGTGGGTTCTCTATGGGAGAAGCCTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTACAAAAATAATGCAGGTGGGTTCTCTATGGGAGAAGCCTTCTG  400

seq1  GCTTAGAACAGGGATGGATCTTTCTGAGGTTGGCTAGTTAATTTTTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAACAGGGATGGATCTTTCTGAGGTTGGCTAGTTAATTTTTTTAA  450

seq1  AGTTTATTTTTATGTCATTTGGAACCTCATTTGCATATAATCCCTCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTTTTATGTCATTTGGAACCTCATTTGCATATAATCCCTCCCCA  500

seq1  GTCTTGACATTCACCTATCCTAATTTAATTTTGTACCTAATAATTGCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGACATTCACCTATCCTAATTTAATTTTGTACCTAATAATTGCCCC  550

seq1  AGGGAGTATAAACTGGGAATAGAGTGGAATTC  582
      ||||||||||||||||||||||||||||||||
seq2  AGGGAGTATAAACTGGGAATAGAGTGGAATTC  582

seq1: chr14_46768575_46769739
seq2: B6Ng01-138H04.g_65_1205

seq1  GAATTCAGAGTAAATGGGCTTTCAGTTCTGTTTTAGATTCCAGATTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGTAAATGGGCTTTCAGTTCTGTTTTAGATTCCAGATTCCCA  50

seq1  GATTCTCATACCTGGAAATCATTCCTTTGGGGGCATATGAGATCTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCATACCTGGAAATCATTCCTTTGGGGGCATATGAGATCTTTTTC  100

seq1  TCCCCTTTGCTTCTTTCAAAGTTTTAAAAATTTATTATTATTATTATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTGCTTCTTTCAAAGTTTTAAAAATTTATTATTATTATTATCTG  150

seq1  TCTGTCTGTCTGTGTCTGTGTCTCACTCTGTGTGTCTGTGTGAGTACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTGTGTCTGTGTCTCACTCTGTGTGTCTGTGTGAGTACAGA  200

seq1  GTGGTTATAAACAGGTTACTTATGTTATGGTTAATGTTACTGTTTTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATAAACAGGTTACTTATGTTATGGTTAATGTTACTGTTTTTGCA  250

seq1  TCTGATTAAGGGGAAAATCTTTCCCCTGCCATCGTGGGCTTGGTGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTAAGGGGAAAATCTTTCCCCTGCCATCGTGGGCTTGGTGCCATT  300

seq1  TTATCATCTTGAAATGATTCATCTCTCCATCTGCTCTGCTTTATAAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATCTTGAAATGATTCATCTCTCCATCTGCTCTGCTTTATAAGAAC  350

seq1  TCTTGAAGGGAAATAATGTAGGCCAGAGTTTTAGTGGGGCAACAAAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAGGGAAATAATGTAGGCCAGAGTTTTAGTGGGGCAACAAAAGCC  400

seq1  TTTTACATGGTAGAGAGAGAGAATCACCCGGCCACAGTTCCCAGGTTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATGGTAGAGAGAGAGAATCACCCGGCCACAGTTCCCAGGTTGCA  450

seq1  GCTTTGTGTCGGGAGCTCTGGTTAACGCCTCCTTTGCAATCCTGAGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTGTCGGGAGCTCTGGTTAACGCCTCCTTTGCAATCCTGAGTTGG  500

seq1  CGGAGAAAGAAACAGGGCCCATTGGATAAGCTGAGCTCCACACTTGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGAAAGAAACAGGGCCCATTGGATAAGCTGAGCTCCACACTTGAACA  550

seq1  TGGAATAGACAGCTTGTTCAGTAGCAGCATCAGCATATGGTGGCTGCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAGACAGCTTGTTCAGTAGCAGCATCAGCATATGGTGGCTGCATC  600

seq1  TTCTAGGCATTCCCCATTTGGGGGATGGGCATGATCTCAGAAGCTCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGCATTCCCCATTTGGGGGATGGGCATGATCTCAGAAGCTCTTTG  650

seq1  ATTTTACTGTAGTGGAGGGGCATCTCCATTTGTCCTGGGGCCCACAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTGTAGTGGAGGGGCATCTCCATTTGTCCTGGGGCCCACAAGAG  700

seq1  ATCAGCGAATGAATACTCCAAGAAGACCCTCCTCTACCTGGGGCTCTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCGAATGAATACTCCAAGAAGACCCTCCTCTACCTGGGGCTCTTAT  750

seq1  GGTAGCTTCTGACAAGCTTTGGGTCACCTTGACTAGCCAGGTTTTCTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTTCTGACAAGCTTTGGGTCACCTTGACTAGCCAGGTTTTCTCCT  800

seq1  ATCTATTCCATCTTCTTTAAGCTTTGTCCACTTCCATGTCTGAAAATCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTCCATCTTCTTTAAGCTTTGTCCACTTCCATGTCTGAAAATCTA  850

seq1  TTATAGGCCTGTGGGGCTAGGAAGGAGGTAGAGTTGAGATGGAAATGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGCCTGTGGGGCTAGGAAGGAGGTAGAGTTGAGATGGAAATGACT  900

seq1  TCAGAAAAAAATTGTTCCTTACTTTCCTCACCACTGTGAGAAAATACCCA  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAG-AAAAAATTGTTCCTTACTTTCCTCACCACTGTGAGAAAATACCCA  949

seq1  GATGAAGTGTCTTGTAAGAGAAGGTTTTCTCTTGTTTGTCTCATGTCTGT  1000
      |||||||||| |||| |||||||| |||||| ||||||||||||||||||
seq2  GATGAAGTGTTTTGT-AGAGAAGG-TTTCTC-TGTTTGTCTCATGTCTGT  996

seq1  CATGGGAGGGAAGACAAATGGTAAGATGGCATAGGTCCGGGGCAATAGAA  1050
      ||||||| ||||||| ||||||||||||||||| |||| |||||      
seq2  CATGGGA-GGAAGAC-AATGGTAAGATGGCATAAGTCC-GGGCA----TG  1039

seq1  ACTAGTGGTATGGATGGTTCATATCTTGATGGACCAGGAAGCAAAGAGCA  1100
      |||||| |||| ||||||||||||||||||||| |||  ||| |||||| 
seq2  ACTAGT-GTAT-GATGGTTCATATCTTGATGGA-CAG--AGC-AAGAGC-  1082

seq1  GAACCAGAACCAGAAATCATCTTCCAGGCCTGTACCTCAGCCACACACTT  1150
      |||| |||  | |||||| |||  | |||  ||| |||  || |||  ||
seq2  GAACTAGA--CCGAAATC-TCT--CTGGCTGGTA-CTCTACC-CACCTTT  1125

seq1  CAG-CTAGCTAGTCCA  1165
      ||| ||||||||||||
seq2  CAGCCTAGCTAGTCCA  1141