BAC Information

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BAC

Clone NameB6Ng01-138K11
Chromosome8 (Build37)14 (Build37)
Map Location 44,241,436 - 44,241,93174,084,217 - 74,084,709
singlet/doubletsingletsinglet
Overlap geneLOC622082
Upstream geneEG620772, LOC628212, Triml1
Downstream geneEG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138K11.bB6Ng01-138K11.g
ACCDH937853DH937854
length973486
definitionDH937853|Mus musculus domesticus DNA, BAC clone: B6Ng01-138K11, 5' end.DH937854|Mus musculus domesticus DNA, BAC clone: B6Ng01-138K11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(44,241,436 - 44,241,931)(74,084,217 - 74,084,709)
sequence
gaattcactgttgatagccattgagcattgagacgcagaggagcatttcg
gctaccacagagtatctcagatgccatagaacatttcagaaccgcaaatg
aaatcatttagaagttctgttttctgaattgcacccaataaggttccctc
tgttttcattaaaggacaacattgctttaaccttccagccagtcctgttc
cacagtttggccctgttctaaatatgtctctgttattctacggattatgc
ggagagatcttggggaaggctacatacccattatacatagtactgagact
tttttaaatatacacgtataatgaattttaagcatgttcccctcttatat
cccccgccccttcctttcttcctctcctttcctgatagtacctttcatgt
tcttagacatttattcttcagcttttatatctatatatgtaattttaagt
atctatataaaacctaggatccaaattagtactagcatgatgttcttttt
tttccattttttattaggtatttagctcgtttacatttccaatgctatac
caaaagcccccatacccacccacccccaatcccctacccacccactcccc
tttttggccctggcgttcccctgtactggggcataaaaaatttgcgtgtc
caatgggcctctctttccagtgatggccgactaggccatcttttgataca
tatgcagctagagtcaagagctccagggtactggttagttcataatgttg
ttccacctatagggttgcagatccctttagctccttgggttctttctcta
gctcctccattgggagccctgtgatccatccattagctgactgtgagcat
ccacttctggatttgctagcccctgcatagtctcacagaacacaacatct
gggtctttcataaaatcttgctagtgtatgcaatgtgtcagcgttggatg
cgattatggataaggatatggga
tctcccaggatctttggttcagaaagttttttcagccatagggacttgtt
gctcaaattgatttcttttggtatttggtaaaaaaatgttttcatagtga
ctttatttttttttaatatttatttattttacgtatatgagtataccatt
gctctcttcagacataccagaagagggcatcagaccccattgcagatggt
tgtgagccaccatgtgtggttgctgggacttgaactcagcacctctggaa
gaacagtcagtgctcttaaccactgagccatctctccagcctctgacttt
attttttaaaatttaattaaaatataatcacattatctccctcctacatt
ttccttccactaaccttccccatgtctcctccctgacttccttcaaatcc
ctggtctctttttctctaattattattgatatatgtgcatgaatacataa
atacaaccttctgagtctgtcagttttgtgttgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44241436_44241931
seq2: B6Ng01-138K11.b_544_1021 (reverse)

seq1  TGCCATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCA  50
      | ||||||||    ||     |||||||| |||||| |||||||||| ||
seq2  TCCCATATCC--TTAT-----CCATAATC-GCATCC-AACGCTGACA-CA  40

seq1  TTGCATACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTC  100
      |||||||||||||||||||||||| |||| |||||||||||   ||| | 
seq2  TTGCATACACTAGCAAGATTTTAT-GAAA-GACCCAGATGT---TGTGTT  85

seq1  TTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGT  150
       ||||||||||||| |||| ||||||||  ||||||||||||||||||||
seq2  CTGTGAGACTATGCAGGGG-CTAGCAAATCCAGAAGTGGATGCTCACAGT  134

seq1  CAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTA  200
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGAA  184

seq1  GCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGA  250
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGA  234

seq1  ACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCACATATATCAAAAG  300
      |||||||||||||| |||||||||||||||||||||| || |||||||||
seq2  ACTAACCAGTACCCTGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAG  284

seq1  ATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||  ||||| 
seq2  ATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAAT  334

seq1  TTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAAAAGGGGGAGTGGG  400
      ||| ||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  TTTTTATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAA-GGGGAGTGGG  383

seq1  TGGGCAGGGGAGTGGGGGTGGGTGGATATGGGAGACTTTTGGTATAGCAT  450
      |||| |||||| ||||||||||||| |||||| | |||||||||||||||
seq2  TGGGTAGGGGATTGGGGGTGGGTGGGTATGGG-GGCTTTTGGTATAGCAT  432

seq1  TGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAAAAA  496
      |||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGAAATGTAAACGAGCTAAATACCTAATAAAAAATGGAAAAAAAA  478

seq1: chr14_74084217_74084709
seq2: B6Ng01-138K11.g_67_558

seq1  GAATTCTCTCCCAGGATCTTTGGTTCAGAAAGTTTTTTCAGCCATAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCCAGGATCTTTGGTTCAGAAAGTTTTTTCAGCCATAGGGA  50

seq1  CTTGTTGCTCAAATTGATTTCTTTTGGTATTTGGTAAAAAAATGTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGCTCAAATTGATTTCTTTTGGTATTTGGTAAAAAAATGTTTTCA  100

seq1  TAGTGACTTTATTTTTTTTTAATATTTATTTATTTTACGTATATGAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACTTTATTTTTTTTTAATATTTATTTATTTTACGTATATGAGTAT  150

seq1  ACCATTGCTCTCTTCAGACATACCAGAAGAGGGCATCAGACCCCATTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGCTCTCTTCAGACATACCAGAAGAGGGCATCAGACCCCATTGCA  200

seq1  GATGGTTGTGAGCCACCATGTGTGGTTGCTGGGACTTGAACTCAGCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGTGAGCCACCATGTGTGGTTGCTGGGACTTGAACTCAGCACCT  250

seq1  CTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTCT  300

seq1  GACTTTATTTTTTAAAATTTAATTAAAATATAATCACATTATCTCCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTATTTTTTAAAATTTAATTAAAATATAATCACATTATCTCCCTCC  350

seq1  TACATTTTCCTTCCACTAACCTTCCCCATGTCTCCTCCCTGACTTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTCCTTCCACTAACCTTCCCCATGTCTCCTCCCTGACTTCCTTC  400

seq1  AAATCCCTGGTCTCTTTTTCTCTAATTATTATTGATATATGTGCATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCTGGTCTCTTTTTCTCTAATTATTATTGATATATGTGCATGAAT  450

seq1  ACATAAATACAACCTTCTGAGTCTGTTCAGTTTTGTGTTGCTT  493
      ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACATAAATACAACCTTCTGAGTCTG-TCAGTTTTGTGTTGCTT  492