BAC Information

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BAC

Clone NameB6Ng01-141I09
Chromosome14 (Build37)
Map Location 111,976,040 - 111,976,571
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
Downstream geneSlitrk5, LOC100043501, EG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141I09.bB6Ng01-141I09.g
ACCDH939962DH939963
length1,122526
definitionDH939962|Mus musculus domesticus DNA, BAC clone: B6Ng01-141I09, 5' end.DH939963|Mus musculus domesticus DNA, BAC clone: B6Ng01-141I09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgtaccccatttttaaattggattatttggtt
tgttggtttctaagttcttttgttctttatatactttggatattatttcc
ctatcagttttcaataactttagttgaaaaatctggggtttttttgtttg
tttgtttttaagatttttagaatgtctactccagcttgtttcctgggtct
cattgttctccagccttttattctgatgtaatgtcaatttttgttgctaa
agtgtgtttcttgtataaagcagtgggatgaccatcctttatgttgcctg
tgtctatttactgggaaagtgagtccaattgtgttaagagattactaatt
accaatgattgctagatccagttattttgttgttggtggccatagtgtgt
gttcttacattcttttagttttgctggcatgagattgttaatttcctgtg
ttttcttgggtgtaattttccttctagtatcttctgtagtgcttgatttg
tgtataggtatcatttaaatttgtttttgttgtaaaaaaaaaaaacttgg
tttcttcatctatggagattaaacttttgctgattacagtagtctggact
gatatctgtgataaggatgtaaaagatctgtatgataaaaacttcaagtc
tctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccat
actcatggattggcaggatcaacattgtaaaaatggctatctcgccaaaa
gcagtctcgccaaaagattcaatgcaatccccatcaaaattccaactcaa
ttcttcacgaattagaaagagcaatctgtaaatttcatctggaataacaa
aaacttaggatagcaagaactcttcttcaaggacaaaagcacttctggtg
gatcaccatgcctggcctaagctttactacagagcaattgtgataaaact
gcatggtactggtatactgacgacaatagaccaatggatagattgaagac
cagaattgaacccaccacctatggtcactggatctttacaggagctaaag
gtatcagtgaagaagaacgcattttaacaaagggttggccactggtggta
tatgaagaagatgtaatgattc
ctatctttgataattttacaatctagagtagtgatgaaaacagaagtgac
tgaaattccagaaatggagatctcagaaccaaagtgtgatatctatgtgt
agcttcataaagtatctctgtgctgatgtgtactatggacagacgttgtc
ttagcagagggcaaggagctgtgtggcaacttgaccccatgaatacagag
aatgtgccaatctgaggcttcacagggagagggtatgaaatcagcagagc
tctctctctctctctctgtctctctctctctctctctgtctctctctctc
tctctctcttttctagaagaattcataatcagggaccagttgactgagag
gctcgattcaaagtttaaaatctaagtagttttgaggaaatcagatgctg
gcacttttccagaaatttcttaccatacagattgaccacatttgctactt
gaatttatataatcagccccaactctctgcatttcaaaggagagggcaca
ccatcttttattgatgaggctatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111976040_111976571
seq2: B6Ng01-141I09.g_69_600 (reverse)

seq1  AAAATAGCCTCATCAGTGAAAGATGGTGTGCCCTCTCCTTTGAAATGCAG  50
      ||||||||||||||| | ||||||||||||||||||||||||||||||||
seq2  AAAATAGCCTCATCAATAAAAGATGGTGTGCCCTCTCCTTTGAAATGCAG  50

seq1  AGAGTTGGGGCTGATTATATAAATGCAAGTAGCAAATGTGGTCAGTCTGT  100
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  AGAGTTGGGGCTGATTATATAAATTCAAGTAGCAAATGTGGTCAATCTGT  100

seq1  ATGGTTTGAAATTTTTGGAAAAGTGCCTGCATTTGATTTCCTCATAACTA  150
      |||||  ||||||| |||||||||||| |||| ||||||||||| |||||
seq2  ATGGTAAGAAATTTCTGGAAAAGTGCCAGCATCTGATTTCCTCAAAACTA  150

seq1  CTTAGATTTTAAACTTTGAATCGAGCCTCTCAGTCAACTGGTCCCTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATTTTAAACTTTGAATCGAGCCTCTCAGTCAACTGGTCCCTGATT  200

seq1  CTGAATTATTCTAGAAAAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGA  250
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCTTCTAGAAAAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGA  250

seq1  GAGAGAGACAGAGAGAGAGAGAGAGAGCTCTGCTGATTTCATACCCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACAGAGAGAGAGAGAGAGAGCTCTGCTGATTTCATACCCTCTC  300

seq1  CCTGTGAAGCCTCAGATTGGCACATTCTCTGTATTCATGGGGTCAAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAAGCCTCAGATTGGCACATTCTCTGTATTCATGGGGTCAAGTTG  350

seq1  CCACACAGCTCCTTGCCCTCTGCTAAGACAACGTCTGTCCATAGTACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGCTCCTTGCCCTCTGCTAAGACAACGTCTGTCCATAGTACACA  400

seq1  TCAGCACAGAGATACTTTATGAAGCTACACATAGATATCACACTTTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACAGAGATACTTTATGAAGCTACACATAGATATCACACTTTGGTT  450

seq1  CTGAGATCTCCATTTCTGGAATTTCAGTCACTTCTGTTTTCATCACTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATCTCCATTTCTGGAATTTCAGTCACTTCTGTTTTCATCACTACT  500

seq1  CTAGATTGTAAAATTATCAAAGATAGGAATTC  532
      ||||||||||||||||||||||||||||||||
seq2  CTAGATTGTAAAATTATCAAAGATAGGAATTC  532