BAC Information

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BAC

Clone NameB6Ng01-141P02
Chromosome14 (Build37)
Map Location 97,850,161 - 98,028,630
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1, LOC635593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141P02.bB6Ng01-141P02.g
ACCDH940268DH940269
length789989
definitionDH940268|Mus musculus domesticus DNA, BAC clone: B6Ng01-141P02, 5' end.DH940269|Mus musculus domesticus DNA, BAC clone: B6Ng01-141P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,850,161 - 97,850,949)(98,027,619 - 98,028,630)
sequence
gaattcacagtaaaaataacaaagaaaatgatattattagatttgcattt
cagaaagaaaactggcagaggcaggtgatctgtgggccaagcatagtgaa
gctgtcagagtctctgccagagtaggtcccttctcagagtagctgcagtt
catacactggactgtacaatagtaagatgaaaatttatactggctaggtc
acagaaacgcaaaggtttaccagttacaataactagcactattacactaa
gaaacagaactttagagttgaaagctatcaagtacaacatgactttgggg
ttttctttgtttgtttctttttttgcagggtggagtgttttttcttggtg
attttgtcttcttttttttgtcttgttttagccaatggttagactataaa
tagaaaaagggaagatttttgaacaatttttagtagattaacacaatata
tgagtaatagaggctacataaacataggtttgcacattagaaaaaatatt
tttagatgatagataagaaaaaagtgaaaggcagcaaaagattccagtac
taaagatcgggttgaggacttagcctcccaaacagcactcttatctgagt
ctcaacaatgctaatgtagaattataatattgtaacatataaatatatac
agataaatacataatatttattgaaatatatcaatacatttacataccaa
tggataattacatcatatgtatttaccaatgactaaatatcatatacaca
cacacatatgtatatgtatgtgtatgtgtatgtgtatgt
gaattctaggaagaagttctgggccacaaagcagttgcccaaataacaga
gtccaagtctactactaccaaagtcttattctgcagaaatccagcatgta
ggggtctaccatttgtcaaaatggagacccataagtgaacttacaggatc
aatttaaagcagatgaggagaattctagagagaagatggcttttatcttg
attagttaggttgttccctaggggtatgggtgtcttagggactggctaga
gttctggggactttcctgaactgttgatggggagcctgaaaactcctgct
gactaactgttcttgcctcaagccaattggtgggcaccttccgatggtgg
ggtagtttctgattggctgctctcaggctgtagttttttgtttgtttgtt
tgtttttgttttttgttgttgtttgttttttgagtaactgatttgccaag
acttgctcagttttgggaaactgaaacttaggactagtctcctgacgtgc
tagtttgaagcttgtcatggagtcagcctggctcagtcctctcaatgcat
aattatgttcttgcaactgcccttttccatgagaaccaagaggtttttgt
cagtgagtatgtttcactggcaaatccctttgtctctctctgaagtgtgt
tctttcaacatctgtttctttgttaatttttcccttccttttgtcctatt
tttttttctttttctctcttttctgtagatatatatattatcaaggagtc
tctttttatattttattatttttgataatactatcatattttttcaactt
ctcccagattgtaccccatgcctgtcaattcaattttactttattttttg
cttataaataaatccaattacaaacaaacaaagaaacactcaaagacatc
attattgttgtgtcatacaacaatacacggagagcagagtcgatacaata
ccaactactactgaccttaattatgcttaaggtggttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97850161_97850949
seq2: B6Ng01-141P02.b_48_836

seq1  GAATTCACAGTAAAAATAACAAAGAAAATGATATTATTAGATTTGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTAAAAATAACAAAGAAAATGATATTATTAGATTTGCATTT  50

seq1  CAGAAAGAAAACTGGCAGAGGCAGGTGATCTGTGGGCCAAGCATAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAAACTGGCAGAGGCAGGTGATCTGTGGGCCAAGCATAGTGAA  100

seq1  GCTGTCAGAGTCTCTGCCAGAGTAGGTCCCTTCTCAGAGTAGCTGCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGAGTCTCTGCCAGAGTAGGTCCCTTCTCAGAGTAGCTGCAGTT  150

seq1  CATACACTGGACTGTACAATAGTAAGATGAAAATTTATACTGGCTAGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACTGGACTGTACAATAGTAAGATGAAAATTTATACTGGCTAGGTC  200

seq1  ACAGAAACGCAAAGGTTTACCAGTTACAATAACTAGCACTATTACACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACGCAAAGGTTTACCAGTTACAATAACTAGCACTATTACACTAA  250

seq1  GAAACAGAACTTTAGAGTTGAAAGCTATCAAGTACAACATGACTTTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGAACTTTAGAGTTGAAAGCTATCAAGTACAACATGACTTTGGGG  300

seq1  TTTTCTTTGTTTGTTTCTTTTTTTGCAGGGTGGAGTGTTTTTTCTTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGTTTGTTTCTTTTTTTGCAGGGTGGAGTGTTTTTTCTTGGTG  350

seq1  ATTTTGTCTTCTTTTTTTTGTCTTGTTTTAGCCAATGGTTAGACTATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTCTTCTTTTTTTTGTCTTGTTTTAGCCAATGGTTAGACTATAAA  400

seq1  TAGAAAAAGGGAAGATTTTTGAACAATTTTTAGTAGATTAACACAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAGGGAAGATTTTTGAACAATTTTTAGTAGATTAACACAATATA  450

seq1  TGAGTAATAGAGGCTACATAAACATAGGTTTGCACATTAGAAAAAATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATAGAGGCTACATAAACATAGGTTTGCACATTAGAAAAAATATT  500

seq1  TTTAGATGATAGATAAGAAAAAAGTGAAAGGCAGCAAAAGATTCCAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGATAGATAAGAAAAAAGTGAAAGGCAGCAAAAGATTCCAGTAC  550

seq1  TAAAGATCGGGTTGAGGACTTAGCCTCCCAAACAGCACTCTTATCTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATCGGGTTGAGGACTTAGCCTCCCAAACAGCACTCTTATCTGAGT  600

seq1  CTCAACAATGCTAATGTAGAATTATAATATTGTAACATATAAATATATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAATGCTAATGTAGAATTATAATATTGTAACATATAAATATATAC  650

seq1  AGATAAATACATAATATTTATTGAAATATATCAATACATTTACATACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATACATAATATTTATTGAAATATATCAATACATTTACATACCAA  700

seq1  TGGATAATTACATCATATGTATTTACCAATGACTAAATATCATATACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAATTACATCATATGTATTTACCAATGACTAAATATCATATACACA  750

seq1  CACACATATGTATATGTATGTGTATGTGTATGTGTATGT  789
      |||||||||||||||||||||||||||||||||||||||
seq2  CACACATATGTATATGTATGTGTATGTGTATGTGTATGT  789

seq1: chr14_98027619_98028630
seq2: B6Ng01-141P02.g_69_1057 (reverse)

seq1  TCAACCACACTCTAAGGCATAATTTAAGGTCAGTAGTAGTTGGGTAATAT  50
      ||||||||   || | |||||| |||||||||||||||||| ||||   |
seq2  TCAACCAC---CTTAAGCATAA-TTAAGGTCAGTAGTAGTT-GGTA--TT  43

seq1  GTATCAGACTCTGCTCTCTGTTGTATTTGTTTGTATGACAACAACAAATA  100
      ||||| |||||||||||| | ||||||   ||||||||| ||||| ||||
seq2  GTATC-GACTCTGCTCTCCG-TGTATT--GTTGTATGAC-ACAAC-AATA  87

seq1  AATTGATGTCTTTGGGTGTTTTCTTTTGTTTTGTTTTGTTAATTGGCTTT  150
      |  ||||||||||| ||| |||||||   |||||||   ||||||| |||
seq2  A--TGATGTCTTTGAGTG-TTTCTTT--GTTTGTTT--GTAATTGGATTT  130

seq1  ATTTTATAAAGCAAAAAATAATGTAAAATTGGATTGCACAGGCATGGGGT  200
      | ||||| ||||||||||||| ||||||||| |||| |||||||||||||
seq2  A-TTTAT-AAGCAAAAAATAAAGTAAAATTGAATTG-ACAGGCATGGGGT  177

seq1  ACAATCTGGGAGAAGTTGAAAAAATATGATAGTATTATCAAAAATAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGGGAGAAGTTGAAAAAATATGATAGTATTATCAAAAATAATAA  227

seq1  AATATAAAAAGAGACTCCTTGATAATATATATATCTAACAAGAAAGAGAG  300
      |||||||||||||||||||||||||||||||||||| |||  ||||||||
seq2  AATATAAAAAGAGACTCCTTGATAATATATATATCT-ACAGAAAAGAGAG  276

seq1  AAAAAGAAAAAAAAATAGGACAAAAGGAA-GGAAAAATTAACAAAGAAAC  349
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAAAAGAAAAAAAAATAGGACAAAAGGAAGGGAAAAATTAACAAAGAAAC  326

seq1  AGATGTTGAAAGAACACACTTCAGAGAGAGACAAAGGGATTTGCCAGTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTGAAAGAACACACTTCAGAGAGAGACAAAGGGATTTGCCAGTGA  376

seq1  AACATACTCACTGACAAAAACCTCTTGGTTCTCATGGAAAAGGGCAGTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACTCACTGACAAAAACCTCTTGGTTCTCATGGAAAAGGGCAGTTG  426

seq1  CAAGAACATAATTATGCATTGAGAGGACTGAGCCAGGCTGACTCCATGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACATAATTATGCATTGAGAGGACTGAGCCAGGCTGACTCCATGAC  476

seq1  AAGCTTCAAACTAGCACGTCAGGAGACTAGTCCTAAGTTTCAGTTTCCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCAAACTAGCACGTCAGGAGACTAGTCCTAAGTTTCAGTTTCCCA  526

seq1  AAACTGAGCAAGTCTTGGCAAATCAGTTACTCAAAAAACAAACAACAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGCAAGTCTTGGCAAATCAGTTACTCAAAAAACAAACAACAACA  576

seq1  AAAAACAAAAACAAACAAACAAACAAAAAACTACAGCCTGAGAGCAGCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAACAAACAAACAAACAAAAAACTACAGCCTGAGAGCAGCCA  626

seq1  ATCAGAAACTACCCCACCATCGGAAGGTGCCCACCAATTGGCTTGAGGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAACTACCCCACCATCGGAAGGTGCCCACCAATTGGCTTGAGGCA  676

seq1  AGAACAGTTAGTCAGCAGGAGTTTTCAGGCTCCCCATCAACAGTTCAGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGTTAGTCAGCAGGAGTTTTCAGGCTCCCCATCAACAGTTCAGGA  726

seq1  AAGTCCCCAGAACTCTAGCCAGTCCCTAAGACACCCATACCCCTAGGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCCAGAACTCTAGCCAGTCCCTAAGACACCCATACCCCTAGGGAA  776

seq1  CAACCTAACTAATCAAGATAAAAGCCATCTTCTCTCTAGAATTCTCCTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAACTAATCAAGATAAAAGCCATCTTCTCTCTAGAATTCTCCTCA  826

seq1  TCTGCTTTAAATTGATCCTGTAAGTTCACTTATGGGTCTCCATTTTGACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTAAATTGATCCTGTAAGTTCACTTATGGGTCTCCATTTTGACA  876

seq1  AATGGTAGACCCCTACATGCTGGATTTCTGCAGAATAAGACTTTGGTAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTAGACCCCTACATGCTGGATTTCTGCAGAATAAGACTTTGGTAGT  926

seq1  AGTAGACTTGGACTCTGTTATTTGGGCAACTGCTTTGTGGCCCAGAACTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACTTGGACTCTGTTATTTGGGCAACTGCTTTGTGGCCCAGAACTT  976

seq1  CTTCCTAGAATTC  1012
      |||||||||||||
seq2  CTTCCTAGAATTC  989