BAC Information

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BAC

Clone NameB6Ng01-142F15
Chromosome14 (Build37)
Map Location 25,863,326 - 26,000,772
singlet/doubletdoublet
Overlap geneLOC100039411
Upstream geneLOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315
Downstream geneZmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142F15.bB6Ng01-142F15.g
ACCDH940570DH940571
length1,0941,061
definitionDH940570|Mus musculus domesticus DNA, BAC clone: B6Ng01-142F15, 5' end.DH940571|Mus musculus domesticus DNA, BAC clone: B6Ng01-142F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,999,670 - 26,000,772)(25,863,326 - 25,864,414)
sequence
gaattctgctgtaaagggtctctaaattctgctgtacacttccacctaat
ctatgttccgactacagtagagtctcagtgtcccaaacccaccacctcct
tcttgtcccctccccttcatcttccctttgcctttgcccaggggagacca
cacccagcccacctttcctgtggaatcttccatatccacacgggaaacct
tagtgacagtactgtccaacctcgagctccacgtgcagggtgcatggctg
gtgggtgggcacaagctccctaagggcagccacaccttttagtaactgag
ccacttcacagccatgccctttgtggtgacatttggagacatgtaaggag
tcacgattcagatgtgttcacgaattacccctagggctcgaggtggtacc
tggcccttctgggaaagctgaacccattcacctgtcccattatcaccaag
gagagccattactgccatgtaacacagctcaggcattgaaacactgtaac
tgttaggttctcagaggtacccagttagagatgcaggcactggctttgcc
tgcattttttttctttctgttctagaaacacatacctgtctgcacagtgg
attgaactactcccaccagaaatgctacagaacctttcaaataaatattt
agtgtacgatctggtaattttatgttgtgagttacaaagcctttatctgg
tacccacctttcatttaaaccttggggtcctgctttggtctctaatgaca
ttatgttgcatcagaattagaaaggctatttaaaaataaaaaaacagagg
gcctgtattatttgttgtaagtcatgctaatgtttaaatttcgagtcttt
tttactgctgattaaacctctgaagactaaaggcagagtttctgcttcac
tgctaggagcaaagacgatggtgtggcttggggaagggagagcgcctgaa
gaatgcacgggaagttgctgcatttatgataaagcaggcattatcatttt
atagaattaacagctagaagggagaagtcggcgatgccgcgatcagtgcg
agaaacatcttaacattttaattactgtatttattagctttagt
gaattccatatgaagttttaattcatactcactccgattcaggagatagt
ttctccatcttacagacaaaaagtctgatcctcacaagagttacagaagt
gattgaagactgccaacctataaataagttaaaaaagcaaacagttggtc
ccttctagagcctcatacagtatgatgaagttgcctcttctgaaaggtca
tctagaggtcatttggcacactctcctttgcagaaatgacaagtgtaaaa
cccagagaccccagataactggccaaggtcacacagtaaatgagaagcag
gggaaaatgggtccttgcatctcttagagccctggttcctgaagggagat
ggacgagagaaacagcagatttgtaaggcggcatctcacacgaaatggtg
tgtgacatgcagctgtgtggggtgggaagcagcatgagtcatgaagcagt
cagtgtgggacatgacgccctgagttgcgtgaagcaccgtatggcacaaa
gtgatgaggggcgttcagcactgtgtggcaagacgccgtgtggaccatga
agccacgtggagcatgacgccgagtgaaacttaaagcaatgaagggtgtg
ctgcagtgtgggctgtgaagtaacatggggcatgaaccagggtggggcat
ggagcattgcgtggcagaccaatgtgcctagctacctttctcccgacctg
gaaactctggagaaactcatcagctctttgaccatcagctgaccatgaag
cttgaagcttccctctacccaagcttagacatgaaacccctggtgtctgc
ttgtacctatacttaatccatgtcccttttcaggatatttcagcttgcct
tggctggaaaaaataggccatcacagacatgagtgtaatggactggttta
agtttcctggggcttataaaaggtggtagtttggtaacagcttgcatagc
cttctgtatacttatctggctatgcatcttgcaaatggctcatgcagctt
tgggacatagaagactccaatttgttctacatatgattctgcttggagtt
ttttttttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25999670_26000772
seq2: B6Ng01-142F15.b_46_1139 (reverse)

seq1  ACTAAAGCTATTAAAATACAGTTAATTAAAATTGTTAGATTGTTTTCCTT  50
      |||||||||| | |||||||| ||||||||| |||||   |||||    |
seq2  ACTAAAGCTAAT-AAATACAG-TAATTAAAA-TGTTAAGATGTTT---CT  44

seq1  CGCACTGATCGCGGCATCGCCGACTTCTCCC-TCTAGCTGTTTAATTCCT  99
      ||||||||||||||||||||||||||||||| |||||||| |||||| ||
seq2  CGCACTGATCGCGGCATCGCCGACTTCTCCCTTCTAGCTG-TTAATT-CT  92

seq1  ATTAAAAATGATAATGCCCTGCTTTATTCATAAATGCAGCAACCTTCCCG  149
      ||  |||||||||||| ||||||||| ||||||||||||||| |||||||
seq2  AT--AAAATGATAATG-CCTGCTTTA-TCATAAATGCAGCAA-CTTCCCG  137

seq1  TGCATTCTTCAGGCGCTCTCCCTTCCCCAAGCCACACCATCGTCTTTGCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTTCAGGCGCTCTCCCTTCCCCAAGCCACACCATCGTCTTTGCT  187

seq1  CCTAGCAGTGAAGCAGAAACTCTGCC-TTAGTCTTCAGAGGTTTAATCAG  248
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTAGCAGTGAAGCAGAAACTCTGCCTTTAGTCTTCAGAGGTTTAATCAG  237

seq1  CAGTAAAAAAGACTCGAAATTTAAACATTAGCATGACTTACAACAAATAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAAAAGACTCGAAATTTAAACATTAGCATGACTTACAACAAATAA  287

seq1  TACAGGCCCTCTGTTTTTTTATTTTTAAATAGCC-TTCTAATTCTGATGC  347
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TACAGGCCCTCTGTTTTTTTATTTTTAAATAGCCTTTCTAATTCTGATGC  337

seq1  AACATAATGTCATTAGAGACCAAAGCAGGACCCCAAGGTTT-AATGAAAG  396
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACATAATGTCATTAGAGACCAAAGCAGGACCCCAAGGTTTAAATGAAAG  387

seq1  GTGGGTACCAGATAAAGGCTTTGTAACTCACAACATAAAATTACCAGATC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTACCAGATAAAGGCTTTGTAACTCACAACATAAAATTACCAGATC  437

seq1  GTACACTAAATATTTATTTGAAAGGTTCTGTAGCATTTCTGGTGGGAGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTAAATATTTATTTGAAAGGTTCTGTAGCATTTCTGGTGGGAGTA  487

seq1  GTTCAATCCACTGTGCAGACAGGTATGTGTTTCTAGAACAGAAAGAAAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATCCACTGTGCAGACAGGTATGTGTTTCTAGAACAGAAAGAAAAA  537

seq1  AAATGCAGGCAAAGCCAGTGCCTGCATCTCTAACTGGGTACCTCTGAGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGGCAAAGCCAGTGCCTGCATCTCTAACTGGGTACCTCTGAGAA  587

seq1  CCTAACAGTTACAGTGTTTCAATGCCTGAGCTGTGTTACATGGCAGTAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAGTTACAGTGTTTCAATGCCTGAGCTGTGTTACATGGCAGTAAT  637

seq1  GGCTCTCCTTGGTGATAATGGGACAGGTGAATGGGTTCAGCTTTCCCAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCCTTGGTGATAATGGGACAGGTGAATGGGTTCAGCTTTCCCAGA  687

seq1  AGGGCCAGGTACCACCTCGAGCCCTAGGGGTAATTCGTGAACACATCTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAGGTACCACCTCGAGCCCTAGGGGTAATTCGTGAACACATCTGA  737

seq1  ATCGTGACTCCTTACATGTCTCCAAATGTCACCACAAAGGGCATGGCTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGACTCCTTACATGTCTCCAAATGTCACCACAAAGGGCATGGCTGT  787

seq1  GAAGTGGCTCAGTTACTAAAAGGTGTGGCTGCCCTTAGGGAGCTTGTGCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGCTCAGTTACTAAAAGGTGTGGCTGCCCTTAGGGAGCTTGTGCC  837

seq1  CACCCACCAGCCATGCACCCTGCACGTGGAGCTCGAGGTTGGACAGTACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACCAGCCATGCACCCTGCACGTGGAGCTCGAGGTTGGACAGTACT  887

seq1  GTCACTAAGGTTTCCCGTGTGGATATGGAAGATTCCACAGGAAAGGTGGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAAGGTTTCCCGTGTGGATATGGAAGATTCCACAGGAAAGGTGGG  937

seq1  CTGGGTGTGGTCTCCCCTGGGCAAAGGCAAAGGGAAGATGAAGGGGAGGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTGGTCTCCCCTGGGCAAAGGCAAAGGGAAGATGAAGGGGAGGG  987

seq1  GACAAGAAGGAGGTGGTGGGTTTGGGACACTGAGACTCTACTGTAGTCGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAAGGAGGTGGTGGGTTTGGGACACTGAGACTCTACTGTAGTCGG  1037

seq1  AACATAGATTAGGTGGAAGTGTACAGCAGAATTTAGAGACCCTTTACAGC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGATTAGGTGGAAGTGTACAGCAGAATTTAGAGACCCTTTACAGC  1087

seq1  AGAATTC  1103
      |||||||
seq2  AGAATTC  1094

seq1: chr14_25863326_25864414
seq2: B6Ng01-142F15.g_69_1129

seq1  GAATTCCATATGAAGTTTTAATTCATACTCACTCCGATTCAGGAGATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGAAGTTTTAATTCATACTCACTCCGATTCAGGAGATAGT  50

seq1  TTCTCCATCTTACAGACAAAAAGTCTGATCCTCACAAGAGTTACAGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATCTTACAGACAAAAAGTCTGATCCTCACAAGAGTTACAGAAGT  100

seq1  GATTGAAGACTGCCAACCTATAAATAAGTTAAAAAAGCAAACAGTTGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAAGACTGCCAACCTATAAATAAGTTAAAAAAGCAAACAGTTGGTC  150

seq1  CCTTCTAGAGCCTCATACAGTATGATGAAGTTGCCTCTTCTGAAAGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAGAGCCTCATACAGTATGATGAAGTTGCCTCTTCTGAAAGGTCA  200

seq1  TCTAGAGGTCATTTGGCACACTCTCCTTTGCAGAAATGACAAGTGTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGGTCATTTGGCACACTCTCCTTTGCAGAAATGACAAGTGTAAAA  250

seq1  CCCAGAGACCCCAGATAACTGGCCAAGGTCACACAGTAAATGAGAAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGACCCCAGATAACTGGCCAAGGTCACACAGTAAATGAGAAGCAG  300

seq1  GGGAAAATGGGTCCTTGCATCTCTTAGAGCCCTGGTTCCTGAAGGGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATGGGTCCTTGCATCTCTTAGAGCCCTGGTTCCTGAAGGGAGAT  350

seq1  GGACGAGAGAAACAGCAGATTTGTAAGGCGGCATCTCACACGAAATGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAGAGAAACAGCAGATTTGTAAGGCGGCATCTCACACGAAATGGTG  400

seq1  TGTGACATGCAGCTGTGTGGGGTGGGAAGCAGCATGAGTCATGAAGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATGCAGCTGTGTGGGGTGGGAAGCAGCATGAGTCATGAAGCAGT  450

seq1  CAGTGTGGGACATGACGCCCTGAGTTGCGTGAAGCACCGTATGGCACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGGGACATGACGCCCTGAGTTGCGTGAAGCACCGTATGGCACAAA  500

seq1  GTGATGAGGGGCGTTCAGCACTGTGTGGCAAGACGCCGTGTGGACCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAGGGGCGTTCAGCACTGTGTGGCAAGACGCCGTGTGGACCATGA  550

seq1  AGCCACGTGGAGCATGACGCCGAGTGAAACTTAAAGCAATGAAGGGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACGTGGAGCATGACGCCGAGTGAAACTTAAAGCAATGAAGGGTGTG  600

seq1  CTGCAGTGTGGGCTGTGAAGTAACATGGGGCATGAACCAGGGTGGGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTGTGGGCTGTGAAGTAACATGGGGCATGAACCAGGGTGGGGCAT  650

seq1  GGAGCATTGCGTGGCAGACCAATGTGCCTAGCTACCTTTCTCCCGACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATTGCGTGGCAGACCAATGTGCCTAGCTACCTTTCTCCCGACCTG  700

seq1  GAAACTCTGGAGAAACTCATCAGCTCTTTGACCATCAGCTGACCATGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTGGAGAAACTCATCAGCTCTTTGACCATCAGCTGACCATGAAG  750

seq1  CTTGAAGCTTCCCTCTACCCAAGCTTAGACATGAAACCCCTGGTGTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGCTTCCCTCTACCCAAGCTTAGACATGAAACCCCTGGTGTCTGC  800

seq1  TTGTACCTATACTTAATCCATGTCCCTTTTCAGGAATATTTCAGCTTGCC  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTGTACCTATACTTAATCCATGTCCCTTTTCAGG-ATATTTCAGCTTGCC  849

seq1  TTGGCTGGAAAAAAATAGGCCCATCACAGACATGAGTGTAATGGACTGGT  900
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  TTGGCTGG-AAAAAATAGG-CCATCACAGACATGAGTGTAATGGACTGGT  897

seq1  TTAAGTTTTCCTGGGGGCTTAATAAAAGGTGGTAGTTTGGGTAACAGCTT  950
      ||||| |||||| ||||||| ||||||||||||||||| |||||||||||
seq2  TTAAG-TTTCCT-GGGGCTT-ATAAAAGGTGGTAGTTT-GGTAACAGCTT  943

seq1  TGCCATAGGCCCTTCTGTTAATACTTATCTGGCTAATGCATCTTGCAAAT  1000
         |||||  ||||||||  |||||||||||||| |||||||||||||||
seq2  --GCATAG--CCTTCTGT--ATACTTATCTGGCT-ATGCATCTTGCAAAT  986

seq1  GGCCTCATGCAGCTTTGGGGACATTAAGAAGACTTCACAATGTTGTTCTA  1050
      || ||||||||||||| |||||||  ||||||||   |||| ||||||||
seq2  GG-CTCATGCAGCTTT-GGGACAT--AGAAGACT--CCAAT-TTGTTCTA  1029

seq1  CATATGGTATTTCTGCCTTGGAGTTTTTTTTTTTTTCTT  1089
      ||||||    ||||| |||||||   |||||||||||||
seq2  CATATG---ATTCTG-CTTGGAG---TTTTTTTTTTCTT  1061