BAC Information

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BAC

Clone NameB6Ng01-143J07
Chromosome14 (Build37)
Map Location 103,868,689 - 103,869,457
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797
Downstream geneScel, LOC100043448, Slain1, Ednrb, Pou4f1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143J07.bB6Ng01-143J07.g
ACCDH941481DH941482
length7691,158
definitionDH941481|Mus musculus domesticus DNA, BAC clone: B6Ng01-143J07, 5' end.DH941482|Mus musculus domesticus DNA, BAC clone: B6Ng01-143J07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaagaagtttgtcttccaactgagtggctcagacaaaagcgg
tttgatccccgccccccccccccacacacacacccccaaatgagaattct
tctgagatgccagggtttccaatcaacccaagacgagtcataatggagat
taaaatccatcctccgtctcttgttctttacaaaccccaaagcatcacac
ccttcaaggatgactcttaaagcaatcaggtttttaacttgagactggat
ttaccctggagagaaacaaaaagataattccgtttgaaactcaccactag
agggcagacattgcactgaggatatgggttagtgcttagatcacagcctt
aaaatgaaagcctggggcaggattgtaaagacattttttgtttgagaaat
aagaaaagagaaacgggggaagaggaagagaagatagcatcttgttgatc
atattcctagggaattaatgagaaacagaagtcaccaggtcccacaagcc
tgtgcacgtttttttctttccgggagagcagactcctggccgtgtcttcg
gatgacagttgtaggaccatgattcagcatgtggagtggaatgaggtcag
atcctcaatccacttggtgatttaacctgcctacgaaatagccgaagatc
aaggtggccaggcaaccgcaccacaacaaaacacatatcactgccacccg
acgttgtggaaccttccaccgcagctatgctagtaggctgttggtgtgtg
tgtgtgtgtgtgtgtgtgt
gaattctcacctaaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaacaacactgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagtcagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttataaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
acaaatgaagactgaagtgtggacactatgcccctctttagaagtgggaa
caaaacacccatggaaaggagttacagaaacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatatactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca
tggagagtagagaagtacccagagctaaagggatctgcaccctatagtga
acaacatatgactaccagtacccggctcttgtctcttagctgcatatgta
ttcaagatggcctagcgccatacttgaaggaagccatggcaccccaacct
tgaaatgccagtacatggaactgccctaggcaaagttaattgttgtggag
gtagattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103868689_103869457
seq2: B6Ng01-143J07.b_48_816 (reverse)

seq1  ACACACACACACACACACACACACACCAACAGCCTACTAGCATAGCTGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACCAACAGCCTACTAGCATAGCTGCG  50

seq1  GTGGAAGGTTCCACAACGTCGGGTGGCAGTGATATGTGTTTTGTTGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGGTTCCACAACGTCGGGTGGCAGTGATATGTGTTTTGTTGTGGT  100

seq1  GCGGTTGCCTGGCCACCTTGATCTTCGGCTATTTCGTAGGCAGGTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTTGCCTGGCCACCTTGATCTTCGGCTATTTCGTAGGCAGGTTAAAT  150

seq1  CACCAAGTGGATTGAGGATCTGACCTCATTCCACTCCACATGCTGAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGTGGATTGAGGATCTGACCTCATTCCACTCCACATGCTGAATCA  200

seq1  TGGTCCTACAACTGTCATCCGAAGACACGGCCAGGAGTCTGCTCTCCCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTACAACTGTCATCCGAAGACACGGCCAGGAGTCTGCTCTCCCGG  250

seq1  AAAGAAAAAAACGTGCACAGGCTTGTGGGACCTGGTGACTTCTGTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAAACGTGCACAGGCTTGTGGGACCTGGTGACTTCTGTTTCTC  300

seq1  ATTAATTCCCTAGGAATATGATCAACAAGATGCTATCTTCTCTTCCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCCCTAGGAATATGATCAACAAGATGCTATCTTCTCTTCCTCTT  350

seq1  CCCCCGTTTCTCTTTTCTTATTTCTCAAACAAAAAATGTCTTTACAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGTTTCTCTTTTCTTATTTCTCAAACAAAAAATGTCTTTACAATCC  400

seq1  TGCCCCAGGCTTTCATTTTAAGGCTGTGATCTAAGCACTAACCCATATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGGCTTTCATTTTAAGGCTGTGATCTAAGCACTAACCCATATCC  450

seq1  TCAGTGCAATGTCTGCCCTCTAGTGGTGAGTTTCAAACGGAATTATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCAATGTCTGCCCTCTAGTGGTGAGTTTCAAACGGAATTATCTTT  500

seq1  TTGTTTCTCTCCAGGGTAAATCCAGTCTCAAGTTAAAAACCTGATTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTCTCCAGGGTAAATCCAGTCTCAAGTTAAAAACCTGATTGCTT  550

seq1  TAAGAGTCATCCTTGAAGGGTGTGATGCTTTGGGGTTTGTAAAGAACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTCATCCTTGAAGGGTGTGATGCTTTGGGGTTTGTAAAGAACAAG  600

seq1  AGACGGAGGATGGATTTTAATCTCCATTATGACTCGTCTTGGGTTGATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGAGGATGGATTTTAATCTCCATTATGACTCGTCTTGGGTTGATTG  650

seq1  GAAACCCTGGCATCTCAGAAGAATTCTCATTTGGGGGTGTGTGTGTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGGCATCTCAGAAGAATTCTCATTTGGGGGTGTGTGTGTGGGG  700

seq1  GGGGGGGGCGGGGATCAAACCGCTTTTGTCTGAGCCACTCAGTTGGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGCGGGGATCAAACCGCTTTTGTCTGAGCCACTCAGTTGGAAGA  750

seq1  CAAACTTCTTCTGGAATTC  769
      |||||||||||||||||||
seq2  CAAACTTCTTCTGGAATTC  769