BAC Information

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BAC

Clone NameB6Ng01-144I13
Chromosome14 (Build37)
Map Location 101,027,556 - 101,166,990
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668672, EG546623, Klf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144I13.bB6Ng01-144I13.g
ACCDH942188DH942189
length1,0731,136
definitionDH942188|Mus musculus domesticus DNA, BAC clone: B6Ng01-144I13, 5' end.DH942189|Mus musculus domesticus DNA, BAC clone: B6Ng01-144I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,165,908 - 101,166,990)(101,027,556 - 101,028,721)
sequence
gaattccctaaattcatgaagagattttttataattcattaaagtctcat
gataaaactgataggtctaaaagccatgtatttcccatccagatatgatc
agacttcctgaagaaatgcattcctactttgcaaagtttgtgatataaac
taaatgattgctagaaggtcattgtatgaatacaaggctcctttcactta
cttattttttaattattttctttaatacatcatttaaaactttgctttaa
ttttttatttaattctttgcagttctcgtctgggtaatactttatgggat
ataattatattctctgagtttggggcttaccttggataatattattagga
tagagatttattatatgtatttgaatgttttaactacatctgcagacgtg
caccacatgtgtgttatgtctgagctggccagagaaggcagtaggccccc
cagtaaatgcagtcacagacagttatcagctgctgtgtgggtgctgggaa
ctggacggagctgaactaattacacttctgagcactttttgttacccccc
acccccctattggcccttttaaaatatttatttattttattttatgtata
tgagtgttttgtggcttgtacgtttgtgtaccacatggatgtttggggct
gaccataaagtttgatgtttgatccagaagggatcactgagtcccctgca
actggaataacaagtagctacgggccgttatgtgtatgctgggaacccaa
cactggtcctttttgaaagcagcacaagcctttaactgtaagctacattt
tcagccctcaagtttgtttggatttaacttctttagagattttctttttt
gagacaagatagggtgaacaggcctagaactccatggccagactgacctc
ctggcatctgccaattctccactttcatctctccaattctgggacacagg
atgaacacagcatctggtgtaatattgtggttaatcctatcactgaatag
aacattcacttccacagtagttaagtctactcaaaattgatctctttgaa
aggtaagacagagaattctgtca
gaattcttatgtgcactggccctgttgtgtctgaaaagtgctgtttcctt
ggagtcctctaccatggctaggtctttaaatctttctgtctcctcttcca
cacagatctctgagccttgtgaggaggggtctgatgtagatatcacataa
agggctcagtctaaaactcactacatgttgaccagttgtgagtctctttg
tatgtcagtcaccatcagtgacatgatagaaataattcaagatacacaaa
tagaaattaacaaagaaagagagcctctaaagaaaatctaaactaaaata
aaacttgaaataagaaaaaacaaaacaaagcaaacttcaagaagtcaaaa
aaatctcagagataagtttccctaaaagactgaataaagtgaaatagaga
atttccattcttgatgtcatggcagaaagaactgaatagtttattcaaaa
ataatattaaatctaagaaaacttcagcacaaagtgcccacaaatgtgga
gacactgtgaaaagacaaaagttatgaattatctgaatagaggaaggaaa
agaaacctgagtcaaaggcacagaagacattttcaatgaaaccataggaa
aatctaaagaaatagttacatatcaaggtgctagaagcgttcagaacaaa
aagactggaccagaaaagaaatctccctctataaacatattcaaaacact
aaatgtaccaaacaaagaaaagatagaaaaattcccaggaaaagagacag
agttatactcgtaggcaggcccattagaatattttttaaagaaggctgaa
aaccagaagttccaagagagatgtttttcaagctgagaaagaccacagaa
gttagccaagactattatacccatcaaaacttttaatgtatttctttata
atttagctttatcatgagaggctaaccttttcaatgttctgttttatttt
caatacatatttaaaaagctagtgactcactcttattataaaatagtaat
gtgctagatatttttataggtataggttcagttctgagtgggttaataca
ggctaggtgtcatgatattcagttagggatttaaatgtctccagtatgac
attttgactgaggttgtttggagggcaatccccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101165908_101166990
seq2: B6Ng01-144I13.b_46_1118 (reverse)

seq1  TGACAGA--TTTCTGTCTTACCCTATCAAA-AGATCAATTTTGAGTAGAC  47
      |||||||  | ||||||||| ||| ||||| |||||||||||||||||||
seq2  TGACAGAATTCTCTGTCTTA-CCTTTCAAAGAGATCAATTTTGAGTAGAC  49

seq1  TTTAAAACTAACTGTGGAAGTTGAAATGTTCTATTCAGTGATAAGATTAA  97
      ||   |||| |||||||||||   ||||||||||||||||||| ||||||
seq2  TT---AACT-ACTGTGGAAGT--GAATGTTCTATTCAGTGATAGGATTAA  93

seq1  ACACAATATTACACCCAGATGCTGTGGTTCATTCTTGGTGTCCCAGAATT  147
       |||||||||||| ||||||||||| |||||| ||  |||||||||||||
seq2  CCACAATATTACA-CCAGATGCTGT-GTTCATCCT--GTGTCCCAGAATT  139

seq1  GGAGAAGATGAAAGTGGAGAATTGGCAGATGCCAGGAGGTCAGTCTGGCC  197
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAG-AGATGAAAGTGGAGAATTGGCAGATGCCAGGAGGTCAGTCTGGCC  188

seq1  ATGGAGTTCTAGGCCTGTTCACCCTATCTTGTCTCAAAAAAGAAAATCTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTTCTAGGCCTGTTCACCCTATCTTGTCTCAAAAAAGAAAATCTC  238

seq1  TAAAGAAGTTAAATCCAAAACAAACTTGAGGGCTGAAAATGTAGCTTACA  297
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAAAGAAGTTAAATCC-AAACAAACTTGAGGGCTGAAAATGTAGCTTACA  287

seq1  GTTAAAGGCTTGTGCTGCTTTCAAAAAGGACCAGTGTTGGGTTCCCAGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGGCTTGTGCTGCTTTCAAAAAGGACCAGTGTTGGGTTCCCAGCA  337

seq1  TACACATAACGGCCCGTAGCTACTTGTTATTCCAGTTGCAGGGGACTCAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATAACGGCCCGTAGCTACTTGTTATTCCAGTTGCAGGGGACTCAG  387

seq1  TGATCCCTTCTGGATCAAACATCAAACTTTATGGTCAGCCCCAAACATCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCTTCTGGATCAAACATCAAACTTTATGGTCAGCCCCAAACATCC  437

seq1  ATGTGGTACACAAACGTACAAGCCACAAAACACTCATATACATAAAATAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTACACAAACGTACAAGCCACAAAACACTCATATACATAAAATAA  487

seq1  AATAAATAAATATTTTAAAAGGGCCAATAGGGGGGTGGGGGGTAACAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATATTTTAAAAGGGCCAATAGGGGGGTGGGGGGTAACAAAA  537

seq1  AGTGCTCAGAAGTGTAATTAGTTCAGCTCCGTCCAGTTCCCAGCACCCAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCAGAAGTGTAATTAGTTCAGCTCCGTCCAGTTCCCAGCACCCAC  587

seq1  ACAGCAGCTGATAACTGTCTGTGACTGCATTTACTGGGGGGCCTACTGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCTGATAACTGTCTGTGACTGCATTTACTGGGGGGCCTACTGCC  637

seq1  TTCTCTGGCCAGCTCAGACATAACACACATGTGGTGCACGTCTGCAGATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGCCAGCTCAGACATAACACACATGTGGTGCACGTCTGCAGATG  687

seq1  TAGTTAAAACATTCAAATACATATAATAAATCTCTATCCTAATAATATTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAAACATTCAAATACATATAATAAATCTCTATCCTAATAATATTA  737

seq1  TCCAAGGTAAGCCCCAAACTCAGAGAATATAATTATATCCCATAAAGTAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGTAAGCCCCAAACTCAGAGAATATAATTATATCCCATAAAGTAT  787

seq1  TACCCAGACGAGAACTGCAAAGAATTAAATAAAAAATTAAAGCAAAGTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGACGAGAACTGCAAAGAATTAAATAAAAAATTAAAGCAAAGTTT  837

seq1  TAAATGATGTATTAAAGAAAATAATTAAAAAATAAGTAAGTGAAAGGAGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATGTATTAAAGAAAATAATTAAAAAATAAGTAAGTGAAAGGAGC  887

seq1  CTTGTATTCATACAATGACCTTCTAGCAATCATTTAGTTTATATCACAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTCATACAATGACCTTCTAGCAATCATTTAGTTTATATCACAAA  937

seq1  CTTTGCAAAGTAGGAATGCATTTCTTCAGGAAGTCTGATCATATCTGGAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAAAGTAGGAATGCATTTCTTCAGGAAGTCTGATCATATCTGGAT  987

seq1  GGGAAATACATGGCTTTTAGACCTATCAGTTTTATCATGAGACTTTAATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATACATGGCTTTTAGACCTATCAGTTTTATCATGAGACTTTAATG  1037

seq1  AATTATAAAAAATCTCTTCATGAATTTAGGGAATTC  1083
      ||||||||||||||||||||||||||||||||||||
seq2  AATTATAAAAAATCTCTTCATGAATTTAGGGAATTC  1073

seq1: chr14_101027556_101028721
seq2: B6Ng01-144I13.g_67_1202

seq1  GAATTCTTATGTGCACTGGCCCTGTTGTGTCTGAAAAGTGCTGTTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGTGCACTGGCCCTGTTGTGTCTGAAAAGTGCTGTTTCCTT  50

seq1  GGAGTCCTCTACCATGGCTAGGTCTTTAAATCTTTCTGTCTCCTCTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCTCTACCATGGCTAGGTCTTTAAATCTTTCTGTCTCCTCTTCCA  100

seq1  CACAGATCTCTGAGCCTTGTGAGGAGGGGTCTGATGTAGATATCACATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATCTCTGAGCCTTGTGAGGAGGGGTCTGATGTAGATATCACATAA  150

seq1  AGGGCTCAGTCTAAAACTCACTACATGTTGACCAGTTGTGAGTCTCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCAGTCTAAAACTCACTACATGTTGACCAGTTGTGAGTCTCTTTG  200

seq1  TATGTCAGTCACCATCAGTGACATGATAGAAATAATTCAAGATACACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAGTCACCATCAGTGACATGATAGAAATAATTCAAGATACACAAA  250

seq1  TAGAAATTAACAAAGAAAGAGAGCCTCTAAAGAAAATCTAAACTAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTAACAAAGAAAGAGAGCCTCTAAAGAAAATCTAAACTAAAATA  300

seq1  AAACTTGAAATAAGAAAAAACAAAACAAAGCAAACTTCAAGAAGTCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAAATAAGAAAAAACAAAACAAAGCAAACTTCAAGAAGTCAAAA  350

seq1  AAATCTCAGAGATAAGTTTCCCTAAAAGACTGAATAAAGTGAAATAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAGAGATAAGTTTCCCTAAAAGACTGAATAAAGTGAAATAGAGA  400

seq1  ATTTCCATTCTTGATGTCATGGCAGAAAGAACTGAATAGTTTATTCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATTCTTGATGTCATGGCAGAAAGAACTGAATAGTTTATTCAAAA  450

seq1  ATAATATTAAATCTAAGAAAACTTCAGCACAAAGTGCCCACAAATGTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTAAATCTAAGAAAACTTCAGCACAAAGTGCCCACAAATGTGGA  500

seq1  GACACTGTGAAAAGACAAAAGTTATGAATTATCTGAATAGAGGAAGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGTGAAAAGACAAAAGTTATGAATTATCTGAATAGAGGAAGGAAA  550

seq1  AGAAACCTGAGTCAAAGGCACAGAAGACATTTTCAATGAAACCATAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTGAGTCAAAGGCACAGAAGACATTTTCAATGAAACCATAGGAA  600

seq1  AATCTAAAGAAATAGTTACATATCAAGGTGCTAGAAGCGTTCAGAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAAGAAATAGTTACATATCAAGGTGCTAGAAGCGTTCAGAACAAA  650

seq1  AAGACTGGACCAGAAAAGAAATCTCCCTCTATAAACATATTCAAAACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGGACCAGAAAAGAAATCTCCCTCTATAAACATATTCAAAACACT  700

seq1  AAATGTACCAAACAAAGAAAAGATAGAAAAATTCCCAGGAAAAGAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACCAAACAAAGAAAAGATAGAAAAATTCCCAGGAAAAGAGACAG  750

seq1  AGTTATACTCGTAGGCAGGCCCATTAGAATATTTTTTAAAGAAGGCTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATACTCGTAGGCAGGCCCATTAGAATATTTTTTAAAGAAGGCTGAA  800

seq1  AACCAGAAGTTCCAAGAGAGATGTTTTTCAAGCTGAGAAAGACCACAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAAGTTCCAAGAGAGATGTTTTTCAAGCTGAGAAAGACCACAGAA  850

seq1  GTTAGCCAAGACTATTATACCCATCAAAACTTTTAATGTATTTCTTTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCCAAGACTATTATACCCATCAAAACTTTTAATGTATTTCTTTATA  900

seq1  ATTTTAGCTTTATCATGAGAAGGCTAACCTTTTCAATGTTCTGTTTTTAA  950
      | ||||||||||||||||| |||||||||||||||||||||||||||  |
seq2  A-TTTAGCTTTATCATGAG-AGGCTAACCTTTTCAATGTTCTGTTTT--A  946

seq1  TTTTCAATACAATATTTAAAAAGCTTAGTGACTCAACTCTTTATTATAAA  1000
      |||||||||| ||||||||||||| ||||||||| |||| ||||||||||
seq2  TTTTCAATAC-ATATTTAAAAAGC-TAGTGACTC-ACTC-TTATTATAAA  992

seq1  ATAGTAATTGTGCTAGATATTTTTTATAGGTATAGTTTCAGGTTCTGAGT  1050
      ||||||| ||||||||||| ||||||||||||||| |||| |||||||||
seq2  ATAGTAA-TGTGCTAGATA-TTTTTATAGGTATAGGTTCA-GTTCTGAGT  1039

seq1  GGGTTTAATACAGGCTAGGGTTTGTCATGATATTCAAGGTTAGGGATTTT  1100
      ||| |||||||||||||||   ||||||||||||||  ||||||||||| 
seq2  GGG-TTAATACAGGCTAGG---TGTCATGATATTCA--GTTAGGGATTT-  1082

seq1  AAATATGTCTCCAGGTTATGACATTTTTGAACTGAGGTTGTGTTTTTGAG  1150
        | ||||||||||  |||||||||||   ||||||||||   ||| |||
seq2  --AAATGTCTCCAG--TATGACATTTT--GACTGAGGTTG---TTTGGAG  1123

seq1  GGCACATCCACCCATT  1166
      |||| |||  ||||||
seq2  GGCA-ATC--CCCATT  1136