BAC Information

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BAC

Clone NameB6Ng01-145I01
Chromosome14 (Build37)
Map Location 50,169,842 - 50,256,712
singlet/doubletdoublet
Overlap genenone
Upstream gene4930572G02Rik, Otx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
Downstream gene3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145I01.bB6Ng01-145I01.g
ACCDH942889DH942890
length1,1791,121
definitionDH942889|Mus musculus domesticus DNA, BAC clone: B6Ng01-145I01, 5' end.DH942890|Mus musculus domesticus DNA, BAC clone: B6Ng01-145I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,169,842 - 50,171,031)(50,255,582 - 50,256,712)
sequence
gaattctccgtaccagtttccacagcagctgtacctgtttgcaatcccac
caacagtgaataatgtttccccctttactccatcttctccagcatttgtt
gtaggttgttcccttgatctttgtcattctgactgaataagatgaaatct
caaggttggtttgatttgaatttccactatatattttaaagaatttaaaa
aaatatgtgtatgttctgcattcatggatatatgtgcatcatatgtatgt
ctggtgcctaagaaggccagaaggcatcgagtcttctggaattggactta
cagatggttttaagtgctacatggaagctgggaaattatctcaggtcctc
cacaagagtagccaatgctcttaatatctaagctctctctctagcaccca
ttcttagattgcacagccccaccatgtttcaaaatgtggacagtgagctg
gtgagatggcttagatagtgaaggtgcctgcagttaagcctgacgattcc
tgccacggacatggtgaaaagagggaactgagtttccaaagttgtcctgg
aatttccacagatattcacacacatacacatattcacactcatgagtaca
tgtacacaaaataagtcaacaaaaatgtaatgatttggaaaagataaaac
atgcagctcaatagctagcaattttaaaactaagtggttttgaagttata
taagttgtatagtgacattaatctttttatatgaaacgaaataataagac
attattttaagagctgacatttgccaaatatgttcagagtgttcttagga
gactgttgttctgattgtctggaggcttcatagggagtgattacctttta
actttttttttttgtatttcaaagttcaacacccatcattccaggtctag
aaactcaaatttttttgtacaagtgtcaaacgaattctttggaaaagaac
tcatgctaaaccaactcagttaggtcactgtgtcccagttaatcagggga
tttgctacgggattacatccataaatggaagccaggacacaggtagaagg
agcatactggtacacctgtacatgttcttctttctacgatcaaataatat
ggaagatattaagccgggattgcttattggatctaatccagaaggctgct
gtcttaaatgccatgatcagttagtcaat
gaattccagttgtgcaaacttaagcaagtggatcaaaacactgagtcctt
tatttagttatttcctcaaaaggatttgtaagctacctttcctatgctgg
gaattgggtagttcaggtctccactttcaaagaacttacaactgaacaga
aactcgacctggtcagtaagtgtcagaaggttagaacaccattaagggtg
tctacatggacactgggaacagaaacaggaagagctgaactgccttctgt
ggtgagggagggctgaagcttgaagaaggaaaaagatggaaataatcaaa
agactaggtagaaacattcaagatggaatgagaaacatggaccatggtcc
tggggcagggagcactaagactgactgaatacaaaggccaacagaacaag
ttgggaatggaggctgggatggtagggaactgataataatgagaactaaa
ggcataacagcaatcgtacactctcataccaaagccctaaaaggttttaa
gaagttcaaagcaaagcaaagcagttttcttgttttcgggtaatggaaaa
tgctgatataaagagctattctagaatggagctaagcatgggtaagaaaa
gctcaagtcctgtgactttccctctgcctcacagagcagacaggtcatct
ctcttcatgacttgttcactgcctgcctctgctctcttctcagtcccaca
gtgcagcctgccagagttttctcctctctcctcctctctcctcctcctca
gtgctctgctgggacttgtatctcccagcaagcccatgaattattaaaaa
taatttgtttttccagagatagtttttcatctctacagacttttgtaagg
tacaagatgccagactggtgcccataacttactaaattcctggctctcga
tcaagtggtagcagcctaaacttatttccatctgcctttgagaaagcaga
ctcggtgaggcttgactttctgcgagagactcagatgagtcaagcctgca
cttggactggtgtcagcatcatgtctcacttggctccccttgcagttact
tgaaacttcacctctttacccttgcctcagtggctgtatggtcctttctc
ggaatccaggtatctatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50169842_50171031
seq2: B6Ng01-145I01.b_44_1222

seq1  GAATTCTCCGTACCAGTTTCCACAGCAGCTGTACCTGTTTGCAATCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTACCAGTTTCCACAGCAGCTGTACCTGTTTGCAATCCCAC  50

seq1  CAACAGTGAATAATGTTTCCCCCTTTACTCCATCTTCTCCAGCATTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGAATAATGTTTCCCCCTTTACTCCATCTTCTCCAGCATTTGTT  100

seq1  GTAGGTTGTTCCCTTGATCTTTGTCATTCTGACTGAATAAGATGAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTGTTCCCTTGATCTTTGTCATTCTGACTGAATAAGATGAAATCT  150

seq1  CAAGGTTGGTTTGATTTGAATTTCCACTATATATTTTAAAGAATTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTGGTTTGATTTGAATTTCCACTATATATTTTAAAGAATTTAAAA  200

seq1  AAATATGTGTATGTTCTGCATTCATGGATATATGTGCATCATATGTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTGTATGTTCTGCATTCATGGATATATGTGCATCATATGTATGT  250

seq1  CTGGTGCCTAAGAAGGCCAGAAGGCATCGAGTCTTCTGGAATTGGACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCTAAGAAGGCCAGAAGGCATCGAGTCTTCTGGAATTGGACTTA  300

seq1  CAGATGGTTTTAAGTGCTACATGGAAGCTGGGAAATTATCTCAGGTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTTTTAAGTGCTACATGGAAGCTGGGAAATTATCTCAGGTCCTC  350

seq1  CACAAGAGTAGCCAATGCTCTTAATATCTAAGCTCTCTCTCTAGCACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAGTAGCCAATGCTCTTAATATCTAAGCTCTCTCTCTAGCACCCA  400

seq1  TTCTTAGATTGCACAGCCCCACCATGTTTCAAAATGTGGACAGTGAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGATTGCACAGCCCCACCATGTTTCAAAATGTGGACAGTGAGCTG  450

seq1  GTGAGATGGCTTAGATAGTGAAGGTGCCTGCAGTTAAGCCTGACGATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATGGCTTAGATAGTGAAGGTGCCTGCAGTTAAGCCTGACGATTCC  500

seq1  TGCCACGGACATGGTGAAAAGAGGGAACTGAGTTTCCAAAGTTGTCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACGGACATGGTGAAAAGAGGGAACTGAGTTTCCAAAGTTGTCCTGG  550

seq1  AATTTCCACAGATATTCACACACATACACATATTCACACTCATGAGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCACAGATATTCACACACATACACATATTCACACTCATGAGTACA  600

seq1  TGTACACAAAATAAGTCAACAAAAATGTAATGATTTGGAAAAGATAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACAAAATAAGTCAACAAAAATGTAATGATTTGGAAAAGATAAAAC  650

seq1  ATGCAGCTCAATAGCTAGCAATTTTAAAACTAAGTGGTTTTGAAGTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCTCAATAGCTAGCAATTTTAAAACTAAGTGGTTTTGAAGTTATA  700

seq1  TAAGTTGTATAGTGACATTAATCTTTTTATATGAAACGAAATAATAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGTATAGTGACATTAATCTTTTTATATGAAACGAAATAATAAGAC  750

seq1  ATTATTTTAAGAGCTGACATTTGCCAAATATGTTCAGAGTGTTCTTAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTAAGAGCTGACATTTGCCAAATATGTTCAGAGTGTTCTTAGGA  800

seq1  GACTGTTGTTCTGATTGTCTGGAGGCTTCATAGGGAGTGATTACCTTTAA  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GACTGTTGTTCTGATTGTCTGGAGGCTTCATAGGGAGTGATTACCTTTTA  850

seq1  AC-TTTTTTTTTTGTATTTCAAAGTTCAACACCCATCATTCCAGGTCTAG  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTTTTTGTATTTCAAAGTTCAACACCCATCATTCCAGGTCTAG  900

seq1  AAACTCAAA-TTTTTTGTACAAGTGTCAAACGAATTCTTTGGAAAAGAAC  948
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAAATTTTTTTGTACAAGTGTCAAACGAATTCTTTGGAAAAGAAC  950

seq1  TCATGCTAAACCAACTCAGTTAGGTCACTGTGTCCCAGTTAATCAGGGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTAAACCAACTCAGTTAGGTCACTGTGTCCCAGTTAATCAGGGGA  1000

seq1  TTTGCTACGGGATTACATCCAT-AATGGAAGCCAGGACACAGGTAGAAGG  1047
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTGCTACGGGATTACATCCATAAATGGAAGCCAGGACACAGGTAGAAGG  1050

seq1  AGCAAACTGGTACAACCTGTACATGTTCCTCTTCCTTACAGATCAAATAA  1097
      |||| |||||||| |||||||||||||| |||| | ||| |||||||| |
seq2  AGCATACTGGTAC-ACCTGTACATGTTCTTCTTTC-TAC-GATCAAAT-A  1096

seq1  ATAGTGAAGATA-TAAGCCGGAATTTGCTTATTGGATCTAGATCCAAAGA  1146
      |||  ||||||| |||||||| | |||||||||||||||| ||||  |||
seq2  ATATGGAAGATATTAAGCCGGGA-TTGCTTATTGGATCTA-ATCC--AGA  1142

seq1  AAGCTGCTGTCTTTAAAAATGCAATGGAGTCAGTCCTAGTCAAT  1190
      | |||||||||||   |||||| |||   |||||  ||||||||
seq2  AGGCTGCTGTCTT---AAATGCCATG--ATCAGT--TAGTCAAT  1179

seq1: chr14_50255582_50256712
seq2: B6Ng01-145I01.g_70_1190 (reverse)

seq1  ATATATAGATAACCTGGATCCCCGAGAAAGGCACAT-CAGCCCACTGGGG  49
      |||||||||| ||||||||  ||||||||||  ||| ||| |||||| ||
seq2  ATATATAGAT-ACCTGGAT-TCCGAGAAAGGACCATACAG-CCACTGAGG  47

seq1  CAAGGGTAAAGA-GTGAAGTTTTCATAGTAACTGCCAGAGGAGCCAAAGT  98
      |||||||||||| |||||| ||||| ||||||||| || |||||| ||||
seq2  CAAGGGTAAAGAGGTGAAG-TTTCA-AGTAACTGCAAGGGGAGCC-AAGT  94

seq1  GAGACATGATGCTGACCACCAGTCCCAAGTGCAGGCTTTGGCTCATCCTG  148
      ||||||||||||||| ||||||| |||||||||||| ||| ||||| |||
seq2  GAGACATGATGCTGA-CACCAGT-CCAAGTGCAGGC-TTGACTCAT-CTG  140

seq1  AGTCTCTCGCAGGAAGTCAAGCCTCAACCGAGTCTGCTTTCTCAAAGGCA  198
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  AGTCTCTCGCAGAAAGTCAAGCCTC-ACCGAGTCTGCTTTCTCAAAGGCA  189

seq1  GATGGAAATAAGTTTTAGGCTGCTACCACTTGATCGAGAGCCAGGAATTT  248
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GATGGAAATAAG-TTTAGGCTGCTACCACTTGATCGAGAGCCAGGAATTT  238

seq1  AGTAAGTTATGGGCACCAGTCTGGCATCTTGTACCTTACAAAAGTCTGTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTATGGGCACCAGTCTGGCATCTTGTACCTTACAAAAGTCTGTA  288

seq1  GAGATGAAAAACTATCTCTTGGAAAACAAATTATTTTTAATAATTCATGG  348
      ||||||||||||||||||| | ||||||||||||||||||||||||||||
seq2  GAGATGAAAAACTATCTCTGGAAAAACAAATTATTTTTAATAATTCATGG  338

seq1  GCTTGCTGGGAGATACAAGTCCCAGCAGAGCACTGAGGAGGAGGAGAGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTGGGAGATACAAGTCCCAGCAGAGCACTGAGGAGGAGGAGAGAG  388

seq1  GAGGAGAGAGGAGAAAACTCTGGCAGGCTGCACTGTGGGACTGAGAAGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAGAGGAGAAAACTCTGGCAGGCTGCACTGTGGGACTGAGAAGAG  438

seq1  AGCAGAGGCAGGCAGTGAACAAGTCATGAAGAGAGATGACCTGTCTGCTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGCAGGCAGTGAACAAGTCATGAAGAGAGATGACCTGTCTGCTC  488

seq1  TGTGAGGCAGAGGGAAAGTCACAGGACTTGAGCTTTTCTTACCCATGCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGCAGAGGGAAAGTCACAGGACTTGAGCTTTTCTTACCCATGCTT  538

seq1  AGCTCCATTCTAGAATAGCTCTTTATATCAGCATTTTCCATTACCCGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCATTCTAGAATAGCTCTTTATATCAGCATTTTCCATTACCCGAAA  588

seq1  ACAAGAAAACTGCTTTGCTTTGCTTTGAACTTCTTAAAACCTTTTAGGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAACTGCTTTGCTTTGCTTTGAACTTCTTAAAACCTTTTAGGGC  638

seq1  TTTGGTATGAGAGTGTACGATTGCTGTTATGCCTTTAGTTCTCATTATTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATGAGAGTGTACGATTGCTGTTATGCCTTTAGTTCTCATTATTA  688

seq1  TCAGTTCCCTACCATCCCAGCCTCCATTCCCAACTTGTTCTGTTGGCCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCCCTACCATCCCAGCCTCCATTCCCAACTTGTTCTGTTGGCCTT  738

seq1  TGTATTCAGTCAGTCTTAGTGCTCCCTGCCCCAGGACCATGGTCCATGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCAGTCAGTCTTAGTGCTCCCTGCCCCAGGACCATGGTCCATGTT  788

seq1  TCTCATTCCATCTTGAATGTTTCTACCTAGTCTTTTGATTATTTCCATCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCCATCTTGAATGTTTCTACCTAGTCTTTTGATTATTTCCATCT  838

seq1  TTTTCCTTCTTCAAGCTTCAGCCCTCCCTCACCACAGAAGGCAGTTCAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCTTCAAGCTTCAGCCCTCCCTCACCACAGAAGGCAGTTCAGC  888

seq1  TCTTCCTGTTTCTGTTCCCAGTGTCCATGTAGACACCCTTAATGGTGTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGTTTCTGTTCCCAGTGTCCATGTAGACACCCTTAATGGTGTTC  938

seq1  TAACCTTCTGACACTTACTGACCAGGTCGAGTTTCTGTTCAGTTGTAAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTCTGACACTTACTGACCAGGTCGAGTTTCTGTTCAGTTGTAAGT  988

seq1  TCTTTGAAAGTGGAGACCTGAACTACCCAATTCCCAGCATAGGAAAGGTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAAAGTGGAGACCTGAACTACCCAATTCCCAGCATAGGAAAGGTA  1038

seq1  GCTTACAAATCCTTTTGAGGAAATAACTAAATAAAGGACTCAGTGTTTTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACAAATCCTTTTGAGGAAATAACTAAATAAAGGACTCAGTGTTTTG  1088

seq1  ATCCACTTGCTTAAGTTTGCACAACTGGAATTC  1131
      |||||||||||||||||||||||||||||||||
seq2  ATCCACTTGCTTAAGTTTGCACAACTGGAATTC  1121