BAC Information

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BAC

Clone NameB6Ng01-146H09
Chromosome14 (Build37)
Map Location 124,018,532 - 124,019,632
singlet/doubletsinglet
Overlap geneVgcnl1
Upstream genePcca, BC006662, 4930594M22Rik, Tmtc4
Downstream geneItgbl1, LOC668700, Fgf14, GA_x5J8B7W4W3R-189177-188236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146H09.bB6Ng01-146H09.g
ACCDH943599DH943600
length1,2581,101
definitionDH943599|Mus musculus domesticus DNA, BAC clone: B6Ng01-146H09, 5' end.DH943600|Mus musculus domesticus DNA, BAC clone: B6Ng01-146H09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggaactgaaagaagacacaaagaaacagcccaatgaacttaa
aatgaatgaatttaaagagagatgcccaagagaacacaattacaaatttc
ctgatggaaattatgaaacacaaaccaggatttaaaaatgaaattcacta
aaatcatagaaatataaaaaagaacttaagaaaaaaattaagatggaatt
gaataattcagtaaatgaacttgccaacttaagggaagctttgaaaggag
aatgaggcatagtggtaataaaaaacttaggcccaggcaaggtaatacac
acctttaatcctaggagactgaagcaagcagatctctgagttcaaggtca
gcctgggactaagcaagtttcaagtccaggtgtggtggtacacaccttta
atctgggccacaccttctgctagagatctatataaggattttggaagaag
gaagactcactcttcttcaattgcttgcacttccttgccagcacatctct
tggaacctacctcggctgaagaccagcttattgcactagctttgtgggac
tgagaaacttctagattcttggacttcccacccacagctgccaattgttg
ggctcattggactacagactggaagtaattacaataaattcccttaatat
atagacatccaataagctctgtgactctagagaaccccgacaaatataca
atgtttcaagctgacgcaatgaataaacagccaagagactgtaggaagaa
taaaaggctgtaattactgaaacacaaagtaccatccttctccttctcct
cttcctcctcctcctcctcctcctcctcatcatcatcatcacaaacaaca
gtaacaacacaaacacactcataaacacacacacacacacacacgcacac
accccacacagaggagagagagaaagagagagagagagagtgagagagag
agagaataccaaaaccaacaacacaatgatttcatctaacactaatcttt
cacattacttctaaatattaccagtatcagttctccatctaaggatacgg
gctgtttgaatggatcagatgaaatcattcactgatatctaaagaaactt
attttagtttgaagaaagcactgtctaaaataaaggatgaaaaaaatact
cctccaatggaacccggtaacacacgctaccttactaattgcaaagacta
actaacctatggaagtagaaacttccgccttgtgaaggaacaattaccag
aagagcat
gaattccataatttggctgtgggtaattctagttttatcctgctaaagag
tctccatgctgtttcacaatcacttgataatttttcattcccacagttga
aaatgaaagtggttgctccctctcctatccttgctagcatttattgtttt
atttctgaattatcactattgcctgttattagatggaatcacagtgtggt
tttaattttcattttttgatagctaaggatgtagagtaagtaaatattga
caatatgtatttgataatttgagaactatctctgtatttcattaatgtat
ttattgatgcagtgtttgagtttttgctgtttatgtttttactcttgaat
tctttgtatgttctaaatactaatcctctgtcatatgtgtaataataatc
tatacttatcattagcaagtgttagaatgctggaaataaggctggtattg
gagaaactagatgacctatctattggtggtaatgggaatagaggaggatg
acagttttaccagtaggaacaaaatgctaatagatttggtaaaaaaaaaa
gattaaaatggaaaaatgggtggaacacaagttgtatttctgagattata
gaattctgaacaattttattattattttgtcatgactacagaaaactaat
tttcaaagtacaagctaaattatttttatttgttttctttttaactgcta
ttattatgaaaccccacatatgatttctggagtagaagaaatattttaat
aaaataatttacttaatactttctaattaaatgtactgcagtatattctg
atcatggttccactcccccaactttttccagatactccccaccttcctac
ccaaccaatgacatgctctttctttatctccctagaaaacaaatgccttc
taaaagtataattatagaagtatttcacacctaagaatacacatttatat
tagcagataagtctttcatgtttttatagccaggagacttataaacttta
ttgacgttgaaactaaacattatgaaacggaagcagataagtaaccttct
gagctggaaacatggaaatgtttttaatctttctttcatgtgctaaagta
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_124018532_124019632
seq2: B6Ng01-146H09.g_71_1171 (reverse)

seq1  GTACTTTAGCCCATGAAAAGAATGATTAAAAACATTTCCATGTTTCATGC  50
      |||||||||| |||| |||||| |||||||||||||||||||||||  ||
seq2  GTACTTTAGCACATG-AAAGAAAGATTAAAAACATTTCCATGTTTCCAGC  49

seq1  TCAGAAGGTT-CCTATCTGCTTCCGTTTCATATTGTTTAGTTTTCAAACG  99
      |||||||||| | ||||||||||||||||||| ||||||||||   ||||
seq2  TCAGAAGGTTACTTATCTGCTTCCGTTTCATAATGTTTAGTTT--CAACG  97

seq1  TCAATAAAGTTTTATAAGTCTCCTGGCTAT-AAAACATGAAAGACTTATC  148
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  TCAATAAAG-TTTATAAGTCTCCTGGCTATAAAAACATGAAAGACTTATC  146

seq1  TTGCTAATATAAATGTGTA-TCTTAGGTGTGAAATACTTCTATAATTTAT  197
       |||||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  -TGCTAATATAAATGTGTATTCTTAGGTGTGAAATACTTCTATAA-TTAT  194

seq1  ACTTTTAGAAGGCATTTGTTTTCTAGGGAGATAAAGAAAGAGCATGTCAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAGAAGGCATTTGTTTTCTAGGGAGATAAAGAAAGAGCATGTCAT  244

seq1  TGGTTGGGTAGGAAGGTGGGGAGTATCTGGAAAAAGTTGGGGGAGTGGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGGTAGGAAGGTGGGGAGTATCTGGAAAAAGTTGGGGGAGTGGAA  294

seq1  CCATGATCAGAATATACTGCAGTACATTTAATTAGAAAGTATTAAGT-AA  346
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCATGATCAGAATATACTGCAGTACATTTAATTAGAAAGTATTAAGTAAA  344

seq1  TTATTTTATTAAAATATTTCTTCTACTCCAGAAATCATATGT-GGGTTTC  395
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTATTTTATTAAAATATTTCTTCTACTCCAGAAATCATATGTGGGGTTTC  394

seq1  ATAATAATAGCAGTTAAAAAGAAAACAAAT-AAAATAATTTAGCTTGTAC  444
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATAATAATAGCAGTTAAAAAGAAAACAAATAAAAATAATTTAGCTTGTAC  444

seq1  TTTGAAAATTAGTTTTCTGTAGTCATGACAAAATAATAATAAAATTGTTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAATTAGTTTTCTGTAGTCATGACAAAATAATAATAAAATTGTTC  494

seq1  AGAATTCTATAATCTCAGAAATACAACTTGTGTTCCACCCATTTTTCCAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTATAATCTCAGAAATACAACTTGTGTTCCACCCATTTTTCCAT  544

seq1  TTTAATCTTTTTTTTTTACCAAATCTATTAGCATTTTGTTCCTACTGGTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCTTTTTTTTTTACCAAATCTATTAGCATTTTGTTCCTACTGGTA  594

seq1  AAACTGTCATCCTCCTCTATTCCCATTACCACCAATAGATAGGTCATCTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTCATCCTCCTCTATTCCCATTACCACCAATAGATAGGTCATCTA  644

seq1  GTTTCTCCAATACCAGCCTTATTTCCAGCATTCTAACACTTGCTAATGAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCCAATACCAGCCTTATTTCCAGCATTCTAACACTTGCTAATGAT  694

seq1  AAGTATAGATTATTATTACACATATGACAGAGGATTAGTATTTAGAACAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAGATTATTATTACACATATGACAGAGGATTAGTATTTAGAACAT  744

seq1  ACAAAGAATTCAAGAGTAAAAACATAAACAGCAAAAACTCAAACACTGCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAATTCAAGAGTAAAAACATAAACAGCAAAAACTCAAACACTGCA  794

seq1  TCAATAAATACATTAATGAAATACAGAGATAGTTCTCAAATTATCAAATA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAATACATTAATGAAATACAGAGATAGTTCTCAAATTATCAAATA  844

seq1  CATATTGTCAATATTTACTTACTCTACATCCTTAGCTATCAAAAAATGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTCAATATTTACTTACTCTACATCCTTAGCTATCAAAAAATGAA  894

seq1  AATTAAAACCACACTGTGATTCCATCTAATAACAGGCAATAGTGATAATT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAACCACACTGTGATTCCATCTAATAACAGGCAATAGTGATAATT  944

seq1  CAGAAATAAAACAATAAATGCTAGCAAGGATAGGAGAGGGAGCAACCACT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAAAACAATAAATGCTAGCAAGGATAGGAGAGGGAGCAACCACT  994

seq1  TTCATTTTCAACTGTGGGAATGAAAAATTATCAAGTGATTGTGAAACAGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTCAACTGTGGGAATGAAAAATTATCAAGTGATTGTGAAACAGC  1044

seq1  ATGGAGACTCTTTAGCAGGATAAAACTAGAATTACCCACAGCCAAATTAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACTCTTTAGCAGGATAAAACTAGAATTACCCACAGCCAAATTAT  1094

seq1  GGAATTC  1101
      |||||||
seq2  GGAATTC  1101