BAC Information

Click to search

BAC

Clone NameB6Ng01-146M10
Chromosome14 (Build37)
Map Location 7,707,938 - 7,880,934
singlet/doubletdoublet
Overlap geneLOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770
Upstream geneLOC100041456, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054
Downstream geneLOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146M10.bB6Ng01-146M10.g
ACCDH943829DH943830
length3481,071
definitionDH943829|Mus musculus domesticus DNA, BAC clone: B6Ng01-146M10, 5' end.DH943830|Mus musculus domesticus DNA, BAC clone: B6Ng01-146M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,707,938 - 7,708,291)(7,879,853 - 7,880,934)
sequence
tactgcttcattagatgtcatgtgcttttgagggggaacgttggttagga
ctctgacatgcttaagagattttgttagcacccaaaactctagggactgt
ggatgtagtagatgtttcacaacagtaaatataccagctgtgtcaattca
tgtgacatacactccaatttcccagggttttcctgtctcacagaggcaaa
tatctttctcctataggtttaattgtacaaaacatggacaatattttcta
acggtgtattccttgacagagggcattttttcatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatat
gaattcaagtagctaaccaccataagagctaagtacaccatctaaaaatg
gggtatagaactacacaaaaaattcacaatgaatcttgaatggctgagag
cactgaagaagtctgcaacatccttaatcttcagggaataaaaccaaaat
gaccctgaggttggtgtccaggagtatactttctagtgaagaatgccaag
atcaaaaacttctgtgaaaacacatggtcagaatttaaagaaacaggaac
attcttccatttctggtaggactgcaaactgctatgacaactatggaaat
caatatggaggttcctcagaaattcccacatagatctacttgaaggccat
gtaccaaccttactggtgaatggcctgcaactttcagttttcacttgatg
gcttattactcagattttcttatttattgagctatgattttgctcttggt
aagcatttggtctctctgattctaaagcagttctttgttcttacacattt
tttgaggaacctctatccactgggacttatttataccttcaaatccctct
aaattgggggactttttatacttgaggaagctgagtgacaaaagcaaagt
atgttgagccctttggtgtccagtgcacacgaatctatgggagtctagat
atgataatcctctagaacattccttaggaaagcagcaggaaaacagcagt
atgctctaaggtacctgtgtgacctcacttacctttgccagctttgtggg
tttctctactgctggtctgagaacaattggaaactcctggaatagatgtc
tcatatctcatttcctttgtcattgttagtatactagtgggagtaggttt
gaggaaaattactctcaagaacattaataaaacaagtgcttcatatggac
catcaggatgaagtaccaagttcaaggacagtctgcagaactgctcaaag
ccagccaagggagcaagaagaatgctagcagaagtcatcattaccagcac
ctgcgaacctttcctccatgacagggtcccttgcttggaggagaaggatg
acctgagatagccgcccatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7707938_7708291
seq2: B6Ng01-146M10.b_51_404

seq1  GAATTCTACTGCTTCATTAGATGTCATGTGCTTTTGAGGGGGAACGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGCTTCATTAGATGTCATGTGCTTTTGAGGGGGAACGTTGG  50

seq1  TTAGGACTCTGACATGCTTAAGAGATTTTGTTAGCACCCAAATCTCTAGG  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTAGGACTCTGACATGCTTAAGAGATTTTGTTAGCACCCAAAACTCTAGG  100

seq1  GACTGTGGATGTAGTAGATGTTTCACAACAGTAAATATACCAGCTGTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGGATGTAGTAGATGTTTCACAACAGTAAATATACCAGCTGTGTC  150

seq1  AATTCATGTGACATACACTCCAATTTCCCAGGGTTTTCCTGTCTCACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGTGACATACACTCCAATTTCCCAGGGTTTTCCTGTCTCACAGA  200

seq1  GGCAAATATCTTTCTCCTATAGGTTTAATTGTACAAAACATGGACAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATATCTTTCTCCTATAGGTTTAATTGTACAAAACATGGACAATAT  250

seq1  TTTCTAACGGTGTATTCCTTGACAGAGGGCATTTTTTCATATACATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTCTAACGGTGTATTCCTTGACAGAGGGCATTTTTTCATATATATATAT  300

seq1  ATATATATATATATATATATATATATATATATATATGTATATATATATAT  350
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATAT  350

seq1  ATAT  354
      ||||
seq2  ATAT  354

seq1: chr14_7879853_7880934
seq2: B6Ng01-146M10.g_68_1138 (reverse)

seq1  ATATGGGGCAGCTATCTCAGGTCATCCCTTCTCCTACCAAAGCTAAGTGA  50
      |||| |||| ||||||||||||||| |||||||||  | |||| ||| ||
seq2  ATAT-GGGCGGCTATCTCAGGTCAT-CCTTCTCCT--CCAAGC-AAGGGA  45

seq1  CCCTGTCCTGGA-GAAAGGTTCTGCAGGTGCTGGTAATGAATGACTTCTG  99
      ||||||| |||| ||||||||| |||||||||||||||| ||||||||||
seq2  CCCTGTCATGGAGGAAAGGTTC-GCAGGTGCTGGTAATG-ATGACTTCTG  93

seq1  CTTGGCTTTCTTCTTGCTCCACTTGGCTGGCTTTGAGCAGTTCTTGCAGA  149
      | | || ||||||||||||| |||||||||||||||||||||| ||||| 
seq2  C-TAGCATTCTTCTTGCTCC-CTTGGCTGGCTTTGAGCAGTTC-TGCAG-  139

seq1  ACTGTCCTTGAACTTGGTACTTCATCCTGATGGTCCATATGAAGCACTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTTGAACTTGGTACTTCATCCTGATGGTCCATATGAAGCACTTG  189

seq1  TTTTATTAATGTTCTTGAGAGTATTTTTCCTTCAAACCTACTCCCACTAG  249
      ||||||||||||||||||||||| |||||| |||||||||||||||||||
seq2  TTTTATTAATGTTCTTGAGAGTAATTTTCC-TCAAACCTACTCCCACTAG  238

seq1  TATACTAACAATGACAAAGGAAATGAGATATGAGACATCTATTCCAGGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAACAATGACAAAGGAAATGAGATATGAGACATCTATTCCAGGAG  288

seq1  TTTCCAATTGTTCTCAGACCAGCAGTAGAGAAGCCCACAAAGCTGGCAAA  349
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTCCAATTGTTCTCAGACCAGCAGTAGAGAAACCCACAAAGCTGGCAAA  338

seq1  GGTAAGTGAGGTCACACAGGTACCTTAGAGCATACTGCTGTTTTCCTGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTGAGGTCACACAGGTACCTTAGAGCATACTGCTGTTTTCCTGCT  388

seq1  GCTTTCCTAAGGAATGTTCTAGAGGATTATCATATCTAGACTCCCATAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTAAGGAATGTTCTAGAGGATTATCATATCTAGACTCCCATAGA  438

seq1  TTCGTGTGCACTGGACACCAAAGGGCTCAACATACTTTGCTTTTGTCACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGTGCACTGGACACCAAAGGGCTCAACATACTTTGCTTTTGTCACT  488

seq1  CAGCTTCCTCAAGTATAAAACGTCCCCCAATTTAGAGGGATTTGAAGGTA  549
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAGCTTCCTCAAGTATAAAAAGTCCCCCAATTTAGAGGGATTTGAAGGTA  538

seq1  TAAATAAGTCCCAGTGGATAGAGGTTCCTCAAAAAATGTGTAAGAACAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGTCCCAGTGGATAGAGGTTCCTCAAAAAATGTGTAAGAACAAA  588

seq1  GAACTGCTTTAGAATCAGAGAGACCAAATGCTTACCAAGAGCAAAGTCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAACTGCTTTAGAATCAGAGAGACCAAATGCTTACCAAGAGCAAAATCAT  638

seq1  AGCTCAATAAATAAGAAAATCTGAGTAATAAGCCATCAAGTGAAAACTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAATAAATAAGAAAATCTGAGTAATAAGCCATCAAGTGAAAACTGA  688

seq1  AAGTTGCAGGCCATTCACCAGTAAGGTTGGTACATGGACTTCAAGTAGAT  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGTTGCAGGCCATTCACCAGTAAGGTTGGTACATGGCCTTCAAGTAGAT  738

seq1  CTATGTGGGAATTTCTGAGGAACCTCCATATTGATTTCCATAGTTGTCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGGGAATTTCTGAGGAACCTCCATATTGATTTCCATAGTTGTCAT  788

seq1  AGCAGTTTGCAGTCCTACCAGAAATGGAAGAATGTTCCTGTTTCTTTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTTGCAGTCCTACCAGAAATGGAAGAATGTTCCTGTTTCTTTAAA  838

seq1  TTCTGACCATGTGTTTTCACAGAAGTTTTTGATCTTGGCATTCTTCACTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACCATGTGTTTTCACAGAAGTTTTTGATCTTGGCATTCTTCACTA  888

seq1  GAAAGTATACTGCTGGACACCAACCTCAGGGTCATTTTGGTTTTATTCCC  949
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTATACTCCTGGACACCAACCTCAGGGTCATTTTGGTTTTATTCCC  938

seq1  TGAAGATTAAGGATGTTGCAGACTTCTTCAGTGCTCTCAGCCATTCAAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTAAGGATGTTGCAGACTTCTTCAGTGCTCTCAGCCATTCAAGA  988

seq1  TTCATTGTGAATTTTTTGTGTAGTTCTATACCCCATTTTTAGATGGTGTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTCATTGTGAATTTTTTGTGTAGTTCTATACCCCATTTTTAGATGGTGTA  1038

seq1  CTTAGCTCTTATGGTGGTTAGCTACTTGAATTC  1082
      |||||||||||||||||||||||||||||||||
seq2  CTTAGCTCTTATGGTGGTTAGCTACTTGAATTC  1071