BAC Information

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BAC

Clone NameB6Ng01-147B13
Chromosome14 (Build37)
Map Location 21,421,582 - 21,477,677
singlet/doubletdoublet
Overlap geneUsp54, Myoz1
Upstream geneEG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb
Downstream geneSynpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk, Myst4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147B13.bB6Ng01-147B13.g
ACCDH944070DH944071
length503818
definitionDH944070|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B13, 5' end.DH944071|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,421,582 - 21,422,090)(21,476,861 - 21,477,677)
sequence
aaggccagcccagtctacaaagtaagttgcagggcaaccagggcttttac
agagagaaatccagtctcaaaaaaaccaaacaaacaaaaaaattcaacct
tcatgaacaaaataatgagcctagaatcttgctctgaactccaatggatg
ctacagacttactcaggcacaactaatctattgcacgtctgaaccaacac
cacaggagaaccaacacatcagtcaaggataaggcaccaacaagaaccat
catgtttgtttttctttgtgaaatctctctcattttttttgtgtctatac
aaatgcccagacttattttactcatagcatgaaaatatgagatagagaac
tgatagaaaaaaattgaatgggaaaccaggcatggtggtgtgtaccttta
atcccagcactagttgggaggcacagaaaggtggatccctgtagctagcc
tggtctagaaaacaagttccaggatggccaaagctatacagggaggggag
gga
gaattccaaagaaaggtctaagacatcataggctcaatagcatgtcttta
tatattttacttctggtatttggtcataggagatcagaccttaagggttt
ttttgtttgtttgtttttttccttttggacaggattgattgtagtagtaa
taacaagttacctttcactacttatgtttttttcccccgtttccttggtt
taggaggaaatgtgccaaagatgatatatctgggcagcagccatctgctg
tgtgtgtggggaggactttcagcccccagtataaataaggcaagaatagg
gtggaagaagggtgtggccaggaagatggggatagatcagggagttcaca
gagggcagggctcattctggaagcctcagaagctgcttcctgtgaagaat
gggagcaaggaagggttgtgagtgtgagtgtgaacaatccaatggcacat
gtgtaaaaatgtcataaggatttttgagacaaggttttcctgtatagctc
tgggacttaagagatccacctgccggtgctttaggggtgttgagattaaa
ggcatacatcactatgctgggctcaagaaacctatagtttcatatgttta
ctaaattacacccatgcccacccacccccaaaagccaattccttaggcag
ccgtataagagtaaaaggtacaggagcaagctggtttcaggacatgagtg
ggagatgagggaggatccagggtattgcttcagctctcacccttcctaat
gctgtgacctttgaatacagtaccctcatgttgtgttgacctgcaccata
aatttactgctattcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21421582_21422090
seq2: B6Ng01-147B13.b_50_558

seq1  GAATTCAAGGCCAGCCCAGTCTACAAAGTAAGTTGCAGGGCAACCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCCCAGTCTACAAAGTAAGTTGCAGGGCAACCAGGGC  50

seq1  TTTTACAGAGAGAAATCCAGTCTCAAAAAAACCAAACAAACAAAAAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGAGAGAAATCCAGTCTCAAAAAAACCAAACAAACAAAAAAATT  100

seq1  CAACCTTCATGAACAAAATAATGAGCCTAGAATCTTGCTCTGAACTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTCATGAACAAAATAATGAGCCTAGAATCTTGCTCTGAACTCCAA  150

seq1  TGGATGCTACAGACTTACTCAGGCACAACTAATCTATTGCACGTCTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTACAGACTTACTCAGGCACAACTAATCTATTGCACGTCTGAAC  200

seq1  CAACACCACAGGAGAACCAACACATCAGTCAAGGATAAGGCACCAACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCACAGGAGAACCAACACATCAGTCAAGGATAAGGCACCAACAAG  250

seq1  AACCATCATGTTTGTTTTTCTTTGTGAAATCTCTCTCATTTTTTTTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCATGTTTGTTTTTCTTTGTGAAATCTCTCTCATTTTTTTTGTGT  300

seq1  CTATACAAATGCCCAGACTTATTTTACTCATAGCATGAAAATATGAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAAATGCCCAGACTTATTTTACTCATAGCATGAAAATATGAGATA  350

seq1  GAGAACTGATAGAAAAAAATTGAATGGGAAACCAGGCATGGTGGTGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGATAGAAAAAAATTGAATGGGAAACCAGGCATGGTGGTGTGTA  400

seq1  CCTTTAATCCCAGCACTAGTTGGGAGGCACAGAAAGGTGGATCCCTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCACTAGTTGGGAGGCACAGAAAGGTGGATCCCTGTAG  450

seq1  CTAGCCTGGTCTAGAAAACAAGTTCCAGGATGGCCAAAGCTATACAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTGGTCTAGAAAACAAGTTCCAGGATGGCCAAAGCTATACAGGGA  500

seq1  GGGGAGGGA  509
      |||||||||
seq2  GGGGAGGGA  509

seq1: chr14_21476861_21477677
seq2: B6Ng01-147B13.g_70_887 (reverse)

seq1  GATG-ATAGCAGTAATTTTATGGTTGCAGGTCAACACAACATGA-GGTAC  48
      |||| |||||||||| ||||||| |||||||||||||||||||| |||||
seq2  GATGAATAGCAGTAAATTTATGG-TGCAGGTCAACACAACATGAGGGTAC  49

seq1  TGTATTCAAAGGTCACAGCATTAGGAAGGGTGAGAGCTGAAGCAATACCC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCAAAGGTCACAGCATTAGGAAGGGTGAGAGCTGAAGCAATACCC  99

seq1  TGGATCCTCCCTCATCTCCCACTCATGTCCTGAAACCAGCTTGCTCCTGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTCCCTCATCTCCCACTCATGTCCTGAAACCAGCTTGCTCCTGT  149

seq1  ACCTTTTACTCTTATACGGCTGCCTAAGGAATTGGCTTTTGGGGGTGGGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTACTCTTATACGGCTGCCTAAGGAATTGGCTTTTGGGGGTGGGT  199

seq1  GGGCATGGGTGTAATTTAGTAAACATATGAAACTATAGGTTTCTTGAGCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGGGTGTAATTTAGTAAACATATGAAACTATAGGTTTCTTGAGCC  249

seq1  CAGCATAGTGATGTATGCCTTTAATCTCAACACCCCTAAAGCACCGGCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATAGTGATGTATGCCTTTAATCTCAACACCCCTAAAGCACCGGCAG  299

seq1  GTGGATCTCTTAAGTCCCAGAGCTATACAGGAAAACCTTGTCTCAAAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCTCTTAAGTCCCAGAGCTATACAGGAAAACCTTGTCTCAAAAAT  349

seq1  CCTTATGACATTTTTACACATGTGCCATTGGATTGTTCACACTCACACTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGACATTTTTACACATGTGCCATTGGATTGTTCACACTCACACTC  399

seq1  ACAACCCTTCCTTGCTCCCATTCTTCACAGGAAGCAGCTTCTGAGGCTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCTTCCTTGCTCCCATTCTTCACAGGAAGCAGCTTCTGAGGCTTC  449

seq1  CAGAATGAGCCCTGCCCTCTGTGAACTCCCTGATCTATCCCCATCTTCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGAGCCCTGCCCTCTGTGAACTCCCTGATCTATCCCCATCTTCCT  499

seq1  GGCCACACCCTTCTTCCACCCTATTCTTGCCTTATTTATACTGGGGGCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACACCCTTCTTCCACCCTATTCTTGCCTTATTTATACTGGGGGCTG  549

seq1  AAAGTCCTCCCCACACACACAGCAGATGGCTGCTGCCCAGATATATCATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTCCCCACACACACAGCAGATGGCTGCTGCCCAGATATATCATC  599

seq1  TTTGGCACATTTCCTCCTAAACCAAGGAAACGGGGGAAAAAAACATAAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCACATTTCCTCCTAAACCAAGGAAACGGGGGAAAAAAACATAAGT  649

seq1  AGTGAAAGGTAACTTGTTATTACTACTACAATCAATCCTGTCCAAAAGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAGGTAACTTGTTATTACTACTACAATCAATCCTGTCCAAAAGGA  699

seq1  AAAAAACAAACAAACAAAAAAACCCTTAAGGTCTGATCTCCTATGACCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAACAAACAAAAAAACCCTTAAGGTCTGATCTCCTATGACCAA  749

seq1  ATACCAGAAGTAAAATATATAAAGACATGCTATTGAGCCTATGATGTCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGAAGTAAAATATATAAAGACATGCTATTGAGCCTATGATGTCTT  799

seq1  AGACCTTTCTTTGGAATTC  817
      |||||||||||||||||||
seq2  AGACCTTTCTTTGGAATTC  818