BAC Information

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BAC

Clone NameB6Ng01-147H19
Chromosome14 (Build37)
Map Location 70,482,541 - 70,578,603
singlet/doubletdoublet
Overlap geneBin3, 2610301G19Rik, 9930012K11Rik, Pdlim2
Upstream geneStc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3
Downstream geneSorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147H19.bB6Ng01-147H19.g
ACCDH944356DH944357
length1571,048
definitionDH944356|Mus musculus domesticus DNA, BAC clone: B6Ng01-147H19, 5' end.DH944357|Mus musculus domesticus DNA, BAC clone: B6Ng01-147H19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,578,447 - 70,578,603)(70,482,541 - 70,483,603)
sequence
gaattcttttctgttgtctcccctccctaccacatccttcaacctttctg
ctttgtaatccttgaacttctcctctgggaaatcaggtgtttaacaagag
agtaagatgaacattactggttgggggacgggggacgggggacgggggac
gggaggg
gaattctgcgtgggttctagtgtttctagtccagttctgtgtcctgattc
ggtgaggattccactccacccttctgagattctcagactagccaatcaat
tagatgagcaggatggataaactaaattcacagaagtcagggcagtgagt
taaatctagaaccttctctatggtttcaatgggtaaatctcctgattgct
aaagtacttggtcttaagacaagaccctgaaaggcctctggaaaagtact
gagaaggtctcttggttaagcttttgaagcctgagaggcaggtggaaact
tgacaggggtgcttcagggttggcaagataaccagggagactggcagctt
ttctgtggtcagataatgggaagaggggagtctggttttaaagtcctcca
gctttaatcccacttgaacaggctttccagagtcctcactacttgtcaat
gtctaagaaagtccttagaaagtcttatgaaggagttaaagatttgatgc
ttttgttgttgttgttgttgttgagttgttttgttttttaaagatttatt
tatatatgtgagtacactgctgctctcttcagacccaccagaaaagggta
taggtttccactacagatggttgtgagccaccatgtggttgctgggaatt
gaactcaggacctctacaagagcagtcagtgctctgaatctctgagccat
ctctccagccccgattttgatgcttttaagggagaaggacttctgagatt
tagagcccacatagaacagggaaagtttgtgtagtgtcaacccatgcatc
tcttgatttctatctcccttgaaacagtggtttccatgccctgcaagcta
tttccctcatacctaacttacttccctgataacctagggtttgccattgc
ttttaagagaatatttgtcttttctttttgcttgtactaggatgctttct
aactctagaccactctttagaaaattcatccctctcctcctgtctgctgc
cctatagaaattctatgtatctgattatgatcgtctctggttatggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70578447_70578603
seq2: B6Ng01-147H19.b_42_198 (reverse)

seq1  CCCTCCCGTCCCCCGTCCCCCGTCCCCCGTCCCCCAACCAGTAATGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCGTCCCCCGTCCCCCGTCCCCCGTCCCCCAACCAGTAATGTTCA  50

seq1  TCTTACTCTCTTGTTAAACACCTGATTTCCCAGAGGAGAAGTTCAAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTCTCTTGTTAAACACCTGATTTCCCAGAGGAGAAGTTCAAGGAT  100

seq1  TACAAAGCAGAAAGGTTGAAGGATGTGGTAGGGAGGGGAGACAACAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCAGAAAGGTTGAAGGATGTGGTAGGGAGGGGAGACAACAGAAA  150

seq1  AGAATTC  157
      |||||||
seq2  AGAATTC  157

seq1: chr14_70482541_70483603
seq2: B6Ng01-147H19.g_67_1114

seq1  GAATTCTGCGTGGGTTCTAGTGTTTCTAGTCCAGTTCTGTGTCCTGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCGTGGGTTCTAGTGTTTCTAGTCCAGTTCTGTGTCCTGATTC  50

seq1  GGTGAGGATTCCACTCCACCCTTCTGAGATTCTCAGACTAGCCAATCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGATTCCACTCCACCCTTCTGAGATTCTCAGACTAGCCAATCAAT  100

seq1  TAGATGAGCAGGATGGATAAACTAAATTCACAGAAGTCAGGGCAGTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAGCAGGATGGATAAACTAAATTCACAGAAGTCAGGGCAGTGAGT  150

seq1  TAAATCTAGAACCTTCTCTATGGTTTCAATGGGTAAATCTCCTGATTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTAGAACCTTCTCTATGGTTTCAATGGGTAAATCTCCTGATTGCT  200

seq1  AAAGTACTTGGTCTTAAGACAAGACCCTGAAAGGCCTCTGGAAAAGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACTTGGTCTTAAGACAAGACCCTGAAAGGCCTCTGGAAAAGTACT  250

seq1  GAGAAGGTCTCTTGGTTAAGCTTTTGAAGCCTGAGAGGCAGGTGGAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGTCTCTTGGTTAAGCTTTTGAAGCCTGAGAGGCAGGTGGAAACT  300

seq1  TGACAGGGGTGCTTCAGGGTTGGCAAGATAACCAGGGAGACTGGCAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGGGTGCTTCAGGGTTGGCAAGATAACCAGGGAGACTGGCAGCTT  350

seq1  TTCTGTGGTCAGATAATGGGAAGAGGGGAGTCTGGTTTTAAAGTCCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGTCAGATAATGGGAAGAGGGGAGTCTGGTTTTAAAGTCCTCCA  400

seq1  GCTTTAATCCCACTTGAACAGGCTTTCCAGAGTCCTCACTACTTGTCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAATCCCACTTGAACAGGCTTTCCAGAGTCCTCACTACTTGTCAAT  450

seq1  GTCTAAGAAAGTCCTTAGAAAGTCTTATGAAGGAGTTAAAGATTTGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGAAAGTCCTTAGAAAGTCTTATGAAGGAGTTAAAGATTTGATGC  500

seq1  TTTTGTTGTTGTTGTTGTTGTTGAGTTGTTTTGTTTTTTAAAGATTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGTTGTTGTTGTTGTTGAGTTGTTTTGTTTTTTAAAGATTTATT  550

seq1  TATATATGTGAGTACACTGCTGCTCTCTTCAGACCCACCAGAAAAGGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTGAGTACACTGCTGCTCTCTTCAGACCCACCAGAAAAGGGTA  600

seq1  TAGGTTTCCACTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTCCACTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATT  650

seq1  GAACTCAGGACCTCTACAAGAGCAGTCAGTGCTCTGAATCTCTGAGCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGACCTCTACAAGAGCAGTCAGTGCTCTGAATCTCTGAGCCAT  700

seq1  CTCTCCAGCCCCGA-TTTGATGCTTTTAAGGGAGAAAGGACTTCTGAGAT  749
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  CTCTCCAGCCCCGATTTTGATGCTTTTAAGGGAG-AAGGACTTCTGAGAT  749

seq1  TCAGAGCCCACATAGAACAGGGAAAGTTTGTGTAGTGTCAACCCATGCAT  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCCCACATAGAACAGGGAAAGTTTGTGTAGTGTCAACCCATGCAT  799

seq1  CTCTTGATTTCTATCTCCCTTGAAAACAGTGGTTTCCATGCCCTGCAAGC  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTCTTGATTTCTATCTCCCTTG-AAACAGTGGTTTCCATGCCCTGCAAGC  848

seq1  TATTTCCCTCATACCTAACTTACTTCCCTGGTTAACCTAGGGTTTTTGCC  899
      ||||||||||||||||||||||||||||| | ||||||||||  ||||||
seq2  TATTTCCCTCATACCTAACTTACTTCCCT-GATAACCTAGGG--TTTGCC  895

seq1  ATTGCTTTTAAGAGAATATTTGTCTTTTCCTTTTTGCTTGTACTAAGGAT  949
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  ATTGCTTTTAAGAGAATATTTGTCTTTT-CTTTTTGCTTGTACT-AGGAT  943

seq1  GCTTTCTAACTCTAGACCACTCTTTAGAAAACTCAATCCCCTCTCCCTCC  999
      ||||||||||||||||||||||||||||||| |||   ||||||||   |
seq2  GCTTTCTAACTCTAGACCACTCTTTAGAAAATTCA--TCCCTCTCC--TC  989

seq1  CTGTCTTGCCTGCCCTATAGAAAATTCTATGTATCTGATATATGATCTGT  1049
      ||||||   ||||||||||| |||||||||||||||||| |||||||   
seq2  CTGTCT--GCTGCCCTATAG-AAATTCTATGTATCTGAT-TATGATCGTC  1035

seq1  TCTGGGTTATGGAA  1063
      ||| ||||||||||
seq2  TCT-GGTTATGGAA  1048