BAC Information

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BAC

Clone NameB6Ng01-147J18
Chromosome14 (Build37)
Map Location 100,368,567 - 100,494,500
singlet/doubletdoublet
Overlap geneKlf12
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneLOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147J18.bB6Ng01-147J18.g
ACCDH944444DH944445
length719345
definitionDH944444|Mus musculus domesticus DNA, BAC clone: B6Ng01-147J18, 5' end.DH944445|Mus musculus domesticus DNA, BAC clone: B6Ng01-147J18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,368,567 - 100,369,284)(100,494,156 - 100,494,500)
sequence
gaattcatccctcaggttggaagtgattctccaccatatactgcaaaagc
agtttcaaaagttataagtataaaattattcatatttaagcttagatatt
aaaaacagtgaactgggctagagagatcgtccagtggctaagaatgcctt
ctactctcccataggacccaggtatggatcccagcagccacatcacctgg
ctcatcacctctacctccctaatgtggattcagtgggtatcgcacccaca
tggtaaacatacaaacagacccaaataagtaaaaatcaatttaattagaa
attggtgtgtgtgtgtgtgtgtgtgtgtgtagaatcatcttcgcatgcat
atcctagttgaatcacaggttagctagcccattgtccagtcaacatattt
aaatgcaactgcaactttaaaatgtcctgatgttcaccttaagaaataat
ttcaagctggggagtggtggcgcgcctttaatctcaacacttgggaggca
aaagtaggcagatttctgagtttgaggccagcctggtctatagagtgagt
tctaggacatccaggactacacaagagaaaccttgtctaaaaatccaaaa
aaaaagaaagaaagaaagaaagaaaaagaatttctaaaactggaattcta
agaactagcatgcttctctgaccattttagagactatttaattttttctc
attatttgtttttgtgtgt
ttcctagtggggggatctttaactctgagagcaaattgggagacaaccat
gggggaatggtgacaaatatggggaactaaaaggtgagtggacagagaca
gacaaatatgccacaagctttgggttaggaaatggagaaaaggagatttc
aaacattattcatgaaagctacatcttagttcctgaccatacactgatat
tgctgtttaaatattcatttttctttgagcaaaggacaactgggttttac
ccagaaagctgcttgcccactcttggttggttggttttagatagatagat
agatagataaatagatagatagatagatagatagatagatagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100368567_100369284
seq2: B6Ng01-147J18.b_48_766

seq1  GAATTCATCCCTCAGGTTGGAAGTGATTCTCCACCATATACTGCAAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCTCAGGTTGGAAGTGATTCTCCACCATATACTGCAAAAGC  50

seq1  AGTTTCAAAAGTTATAAGTATAAAATTATTCATATTTAAGCTTAGATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAAAAGTTATAAGTATAAAATTATTCATATTTAAGCTTAGATATT  100

seq1  AAAAACAGTGAACTGGGCTAGAGAGATCGTCCAGTGGCTAAGAATGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGTGAACTGGGCTAGAGAGATCGTCCAGTGGCTAAGAATGCCTT  150

seq1  CTACTCTCCCATAGGACCCAGGTATGGATCCCAGCAGCCACATCACCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTCCCATAGGACCCAGGTATGGATCCCAGCAGCCACATCACCTGG  200

seq1  CTCATCACCTCTACCTCCCTAATGTGGATTCAGTGGGTATCGCACCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCACCTCTACCTCCCTAATGTGGATTCAGTGGGTATCGCACCCACA  250

seq1  TGGTAAACATACAAACAGACCCAAATAAGTAAAAATCAATTTAATTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAACATACAAACAGACCCAAATAAGTAAAAATCAATTTAATTAGAA  300

seq1  ATTGGTGTGTGTGTGTGTGTGTGTGTGTGTAGAATCATCTTCGCATGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGTGTGTGTGTGTGTGTGTGTGTGTAGAATCATCTTCGCATGCAT  350

seq1  ATCCTAGTTGAATCACAGGTTAGCTAGCCCATTGTCCAGTCAACATATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGTTGAATCACAGGTTAGCTAGCCCATTGTCCAGTCAACATATTT  400

seq1  AAATGCAACTGCAACTTTAAAATGTCCTGATGTTCACCTTAAGAAATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAACTGCAACTTTAAAATGTCCTGATGTTCACCTTAAGAAATAAT  450

seq1  TTCAAGCTGGGGAGTGGTGGCGCGCCTTTAATCTCAACACTTGGGAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTGGGGAGTGGTGGCGCGCCTTTAATCTCAACACTTGGGAGGCA  500

seq1  AAAGTAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTATAGAGTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTATAGAGTGAGT  550

seq1  TCTAGGACATCCAGGACTACACAAGAGAAACCTTGTCTAAAAATCCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGACATCCAGGACTACACAAGAGAAACCTTGTCTAAAAATCCAAAA  600

seq1  AAAAAGAAAGAAAGAAAGAAAGAAAAAGAATTTCTAAAACTGGAATTCAA  650
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAAAGAAAGAAAGAAAGAAAGAAAAAGAATTTCTAAAACTGGAATTCTA  650

seq1  AGAACTAGCATGCTTCTCTGACCATTTTAGAGACTATTTAA-TTTTTCTC  699
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAACTAGCATGCTTCTCTGACCATTTTAGAGACTATTTAATTTTTTCTC  700

seq1  ATTATTTGTTTTTGTGTGT  718
      |||||||||||||||||||
seq2  ATTATTTGTTTTTGTGTGT  719

seq1: chr14_100494156_100494500
seq2: B6Ng01-147J18.g_73_417 (reverse)

seq1  TATCTATCTATCTATCTATCTATCTATCTATCTATTTATCTATCTATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTATCTATCTATCTATCTATCTATCTATTTATCTATCTATCTA  50

seq1  TCTATCTAAAACCAACCAACCAAGAGTGGGCAAGCAGCTTTCTGGGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTAAAACCAACCAACCAAGAGTGGGCAAGCAGCTTTCTGGGTAAA  100

seq1  ACCCAGTTGTCCTTTGCTCAAAGAAAAATGAATATTTAAACAGCAATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTTGTCCTTTGCTCAAAGAAAAATGAATATTTAAACAGCAATATC  150

seq1  AGTGTATGGTCAGGAACTAAGATGTAGCTTTCATGAATAATGTTTGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGGTCAGGAACTAAGATGTAGCTTTCATGAATAATGTTTGAAAT  200

seq1  CTCCTTTTCTCCATTTCCTAACCCAAAGCTTGTGGCATATTTGTCTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTCTCCATTTCCTAACCCAAAGCTTGTGGCATATTTGTCTGTCT  250

seq1  CTGTCCACTCACCTTTTAGTTCCCCATATTTGTCACCATTCCCCCATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCACTCACCTTTTAGTTCCCCATATTTGTCACCATTCCCCCATGGT  300

seq1  TGTCTCCCAATTTGCTCTCAGAGTTAAAGATCCCCCCACTAGGAA  345
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCCAATTTGCTCTCAGAGTTAAAGATCCCCCCACTAGGAA  345