BAC Information

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BAC

Clone NameB6Ng01-149C03
Chromosome14 (Build37)
Map Location 25,915,836 - 26,092,102
singlet/doubletdoublet
Overlap genenone
Upstream geneDlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315, LOC100039411
Downstream geneZmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149C03.bB6Ng01-149C03.g
ACCDH945554DH945555
length347246
definitionDH945554|Mus musculus domesticus DNA, BAC clone: B6Ng01-149C03, 5' end.DH945555|Mus musculus domesticus DNA, BAC clone: B6Ng01-149C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,915,836 - 25,916,182)(26,091,857 - 26,092,102)
sequence
cagtagcaaacagctaaaaatatctctgggcattgttgtttggtggtggt
ggtattgttggtggtggtggtggtgctttttgatttgcttgattgtttgt
tcatttgttttatcacattgcctagaactcagggctatgtttctccaagg
ccccgcaaactctggaataatcaacattagaggatgagcaaatattcact
tgaagaatacaagggagcttgcccatgggagcctcccacattgttctctg
tgtggtttcaaagtgtctgactggtcttttgttctctccctgtggtatct
ggagtcatgctctctcttgtatggatcatcactgatgtgagcaggga
ctatcacgccatcgcagctgacatgctgggccaacaagcagcccatgtgg
agggaacagctgtgcctcccagtgtttatggtactgtctgcccggctggc
cactggccccagatctcagaaccagagctcaaacagaatgggcagtatgt
actgatatcatgtgcccgagtgcatgcatgagagagagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25915836_25916182
seq2: B6Ng01-149C03.b_54_400

seq1  CAGTAGCAAACAGCTAAAAATATCTCTGGGCATTGTTGTTTGGTGGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCAAACAGCTAAAAATATCTCTGGGCATTGTTGTTTGGTGGTGGT  50

seq1  GGTATTGTTGGTGGTGGTGGTGGTGCTTTTTGATTTGCTTGTTTGTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGTATTGTTGGTGGTGGTGGTGGTGCTTTTTGATTTGCTTGATTGTTTGT  100

seq1  TCATTTGTTTTATCACATTGCCTAGAACTCAGGGCTATGTTTCTCCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTTTTATCACATTGCCTAGAACTCAGGGCTATGTTTCTCCAAGG  150

seq1  CCCCGCAAACTCTGGAATAATCAACATTAGAGGATGAGCAAATATTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCAAACTCTGGAATAATCAACATTAGAGGATGAGCAAATATTCACT  200

seq1  TGAAGAATACAAGGGAGCTTGCCCATGGGAGCCTCCCACATTGTTCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATACAAGGGAGCTTGCCCATGGGAGCCTCCCACATTGTTCTCTG  250

seq1  TGTGGTTTCAAAGTGTCTGACTGGCCTTGTGTTCTCACCCTGTGGTATCT  300
      |||||||||||||||||||||||| ||| ||||||| |||||||||||||
seq2  TGTGGTTTCAAAGTGTCTGACTGGTCTTTTGTTCTCTCCCTGTGGTATCT  300

seq1  GGAGTCATGCTCTCTCTTGTATGGATCATCACTGATGTGAGCAGGGA  347
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCATGCTCTCTCTTGTATGGATCATCACTGATGTGAGCAGGGA  347

seq1: chr14_26091857_26092102
seq2: B6Ng01-149C03.g_75_320 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50

seq1  CTCTCTCTCTCTCTCTCATGCATGCACTCGGGCACATGATATCAGTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCATGCATGCACTCGGGCACATGATATCAGTACAT  100

seq1  ACTGCCCATTCTGTTTGAGCTCTGGTTCTGAGATCTGGGGCCAGTGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCATTCTGTTTGAGCTCTGGTTCTGAGATCTGGGGCCAGTGGCCA  150

seq1  GCCGGGCAGACAGTACCATAAACACTGGGAGGCACAGCTGTTCCCTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGCAGACAGTACCATAAACACTGGGAGGCACAGCTGTTCCCTCCAC  200

seq1  ATGGGCTGCTTGTTGGCCCAGCATGTCAGCTGCGATGGCGTGATAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGCTTGTTGGCCCAGCATGTCAGCTGCGATGGCGTGATAG  246