BAC Information

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BAC

Clone NameB6Ng01-151L17
Chromosome14 (Build37)
Map Location 68,351,403 - 68,530,532
singlet/doubletdoublet
Overlap geneKctd9, Gnrh1, Dock5
Upstream geneAdra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416, LOC100043046, LOC100043056, Cdca2
Downstream geneNefl, Nefm, LOC100043072, Adam7, Adamdec1, Adam28, LOC641033, LOC100043082
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151L17.bB6Ng01-151L17.g
ACCDH947477DH947478
length6781,107
definitionDH947477|Mus musculus domesticus DNA, BAC clone: B6Ng01-151L17, 5' end.DH947478|Mus musculus domesticus DNA, BAC clone: B6Ng01-151L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,529,856 - 68,530,532)(68,351,403 - 68,352,530)
sequence
gaattcactgttcccagatcaaagtttaatctctgtcatttaatttctga
gccttctcccctcacattcgggcataattcacagtgtgtcagagccagga
cttttgccttctggcctagaatctcatagctggtttggttgtcaaggctc
agatgtgtcggggacctcctgagctagcagtctggaatcagaggtgcagg
aaggggagaaagagatattctgatgaggatctataaaaatgtaattcttg
agtttgttcattctcaacttcccgctttcttgcaagagcagcaggagtct
gctcagcattggggaggtttggcgaagcaaacttaaacactgtttgtggg
aggtttataaactctaaagctgacaggaactctaatggaaggagggtggg
gcatgaacagggcaggtgagaagcatggaatttggggagacagctcactg
ttttactgaggagacacccgagggcttgaccttgagatgagcatgctggt
ttgtgaagacaggacctctggttcagcacagcaaatgctggcctctgtgc
caagtgggtagggaggaagttgccccctttggcaggagccaagtgtagag
gaaggggagaggtaggtggtatagattgtgtcatattagggggagactcc
taatctatgggtctgtgctctgtggttt
gaattcccaaccaccagaggatcattcaccaatatcccgaaaggaatttg
ttcgatttctgctggccactccaaccaagtcagagctgcgctgccaggta
actgaagcagaccgttcgctgcatggcctgtgtgcatccgcaaatctaga
gcagtgccacttccttcgagggctttttgttttgccttatttctctttgt
ttaatgtaagatacaatttaattataagccaaggctttgattgaatttaa
agtggctagtgcacatgagatggagcagccttttttactgtctaattgtg
ctttatgtagcggttcttgagtaacatatggaaattacagcagtttcttt
aaaaagtttatgttctcatatgtgtgtggctggtcagtggcagaaacttt
tgtgtgttatcacaggttttgagaacaccacaatatttatcttttttccc
cttaattaagatgattggattttagaattaataaaataatagctatgcaa
ttgatcatggctattagcaggtatgtgactaactgtgatccctctttaag
cagttcacctgttagtgtagtgtagccatctctgtcttactatatagagg
tgggatttcttttatgagaacccatgaaagccacggacgccgtgtactcc
cagttccctttgctcaagctgataataaactccacggatggaaaggccaa
tggcttctgataatctcggtgcttagttacagtgattaaactcaattcag
acagatggtttcagcatcatgacagtctgtgctttttaattccagggttt
aaacttcagtggtgctgatctttcccgtttggaccttcgatacattaact
caaaatggccaatttaagccgctgcaacctcgcacatgcaaatctctgct
gtgctaatcttgaacgagctgatctttctggatcagtgctcgacgtaaga
atcgttctttagtcataagaaaccaaaatttaggctgtgagcatctcaaa
gaaggaatttattgttcttacagagtttttatttaaaacaaataatgacg
tgtgctgacttggagggccaagtggatggttggcttatgacttccaatct
ttgtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_68529856_68530532
seq2: B6Ng01-151L17.b_44_721 (reverse)

seq1  AAACCACAGAGCACAGAACCATAGATTAGGAGTCT-CCCCTAATCTGACA  49
      ||||||||||||||||| ||||||||||||||||| |||||||| |||||
seq2  AAACCACAGAGCACAGACCCATAGATTAGGAGTCTCCCCCTAATATGACA  50

seq1  CAATCTATACCACCTACCTCTCCCCTTCCTCTACACTTGGCTCCTGCCAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTATACCACCTACCTCTCCCCTTCCTCTACACTTGGCTCCTGCCAA  100

seq1  AGGGGGCAACTTCCTCCCTACCCACTTGGCACAGAGGCCAGCATTTGCTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCAACTTCCTCCCTACCCACTTGGCACAGAGGCCAGCATTTGCTG  150

seq1  TGCTGAACCAGAGGTCCTGTCTTCACAAACCAGCATGCTCATCTCAAGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAACCAGAGGTCCTGTCTTCACAAACCAGCATGCTCATCTCAAGGT  200

seq1  CAAGCCCTCGGGTGTCTCCTCAGTAAAACAGTGAGCTGTCTCCCCAAATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCTCGGGTGTCTCCTCAGTAAAACAGTGAGCTGTCTCCCCAAATT  250

seq1  CCATGCTTCTCACCTGCCCTGTTCATGCCCCACCCTCCTTCCATTAGAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTCTCACCTGCCCTGTTCATGCCCCACCCTCCTTCCATTAGAGT  300

seq1  TCCTGTCAGCTTTAGAGTTTATAAACCTCCCACAAACAGTGTTTAAGTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCAGCTTTAGAGTTTATAAACCTCCCACAAACAGTGTTTAAGTTT  350

seq1  GCTTCGCCAAACCTCCCCAATGCTGAGCAGACTCCTGCTGCTCTTGCAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGCCAAACCTCCCCAATGCTGAGCAGACTCCTGCTGCTCTTGCAAG  400

seq1  AAAGCGGGAAGTTGAGAATGAACAAACTCAAGAATTACATTTTTATAGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGGGAAGTTGAGAATGAACAAACTCAAGAATTACATTTTTATAGAT  450

seq1  CCTCATCAGAATATCTCTTTCTCCCCTTCCTGCACCTCTGATTCCAGACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCAGAATATCTCTTTCTCCCCTTCCTGCACCTCTGATTCCAGACT  500

seq1  GCTAGCTCAGGAGGTCCCCGACACATCTGAGCCTTGACAACCAAACCAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTCAGGAGGTCCCCGACACATCTGAGCCTTGACAACCAAACCAGC  550

seq1  TATGAGATTCTAGGCCAGAAGGCAAAAGTCCTGGCTCTGACACACTGTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGATTCTAGGCCAGAAGGCAAAAGTCCTGGCTCTGACACACTGTGA  600

seq1  ATTATGCCCGAATGTGAGGGGAGAAGGCTCAGAAATTAAATGACAGAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCCCGAATGTGAGGGGAGAAGGCTCAGAAATTAAATGACAGAGAT  650

seq1  TAAACTTTGATCTGGGAACAGTGAATTC  677
      ||||||||||||||||||||||||||||
seq2  TAAACTTTGATCTGGGAACAGTGAATTC  678

seq1: chr14_68351403_68352530
seq2: B6Ng01-151L17.g_68_1174

seq1  GAATTCCCAACCACCAGAGGATCATTCACCAATATCCCGAAAGGAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAACCACCAGAGGATCATTCACCAATATCCCGAAAGGAATTTG  50

seq1  TTCGATTTCTGCTGGCCACTCCAACCAAGTCAGAGCTGCGCTGCCAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATTTCTGCTGGCCACTCCAACCAAGTCAGAGCTGCGCTGCCAGGTA  100

seq1  ACTGAAGCAGACCGTTCGCTGCATGGCCTGTGTGCATCCGCAAATCTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGCAGACCGTTCGCTGCATGGCCTGTGTGCATCCGCAAATCTAGA  150

seq1  GCAGTGCCACTTCCTTCGAGGGCTTTTTGTTTTGCCTTATTTCTCTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCCACTTCCTTCGAGGGCTTTTTGTTTTGCCTTATTTCTCTTTGT  200

seq1  TTAATGTAAGATACAATTTAATTATAAGCCAAGGCTTTGATTGAATTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTAAGATACAATTTAATTATAAGCCAAGGCTTTGATTGAATTTAA  250

seq1  AGTGGCTAGTGCACATGAGATGGAGCAGCCTTTTTTACTGTCTAATTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTAGTGCACATGAGATGGAGCAGCCTTTTTTACTGTCTAATTGTG  300

seq1  CTTTATGTAGCGGTTCTTGAGTAACATATGGAAATTACAGCAGTTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTAGCGGTTCTTGAGTAACATATGGAAATTACAGCAGTTTCTTT  350

seq1  AAAAAGTTTATGTTCTCATATGTGTGTGGCTGGTCAGTGGCAGAAACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTTATGTTCTCATATGTGTGTGGCTGGTCAGTGGCAGAAACTTT  400

seq1  TGTGTGTTATCACAGGTTTTGAGAACACCACAATATTTATCTTTTTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTATCACAGGTTTTGAGAACACCACAATATTTATCTTTTTTCCC  450

seq1  CTTAATTAAGATGATTGGATTTTAGAATTAATAAAATAATAGCTATGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTAAGATGATTGGATTTTAGAATTAATAAAATAATAGCTATGCAA  500

seq1  TTGATCATGGCTATTAGCAGGTATGTGACTAACTGTGATCCCTCTTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCATGGCTATTAGCAGGTATGTGACTAACTGTGATCCCTCTTTAAG  550

seq1  CAGTTCACCTGTTAGTGTAGTGTAGCCATCTCTGTCTTACTATATAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCACCTGTTAGTGTAGTGTAGCCATCTCTGTCTTACTATATAGAGG  600

seq1  TGGGATTTCTTTTATGAGAACCCATGAAAGCCACGGACGCCGTGTACTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTTCTTTTATGAGAACCCATGAAAGCCACGGACGCCGTGTACTCC  650

seq1  CAGTTCCCTTTGCTCAAGCTGATAATAAACTCCACGGATGGAAAGGCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCTTTGCTCAAGCTGATAATAAACTCCACGGATGGAAAGGCCAA  700

seq1  TGGCTTCTGATAATCTCGGTGCTTAGTTACAGTGATTAAACTCAATTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTGATAATCTCGGTGCTTAGTTACAGTGATTAAACTCAATTCAG  750

seq1  ACAGATGGTTTCAGCATCATGACAGTCTGTGCTTTTTAATTCCAGGGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGGTTTCAGCATCATGACAGTCTGTGCTTTTTAATTCCAGGGTTT  800

seq1  AAACTTCAGTGGTGCTGATCTTTCCCGTTTGGACCTTCGATACATTAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAACTTCAGTGGTGCTGATCTTTCCCGTTTGGACCTTCGATACATTAAC-  849

seq1  TCAAAATGGCCAATTTAAGCCGCTGCAACCTCGCACATGCAAATCTCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGGCCAATTTAAGCCGCTGCAACCTCGCACATGCAAATCTCTGC  899

seq1  TGTGCTAATCTTGAACGAGCTGATCTTTCTGGATCAGTGCTCGACGTAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAATCTTGAACGAGCTGATCTTTCTGGATCAGTGCTCGACGTAAG  949

seq1  AATCGTTCTTTAGTCATAAGGAAAACCAAAATTTAGGCTGTTGAGCATTC  1000
      ||||||||||||||||||||  |||||||||||||||||| |||||| ||
seq2  AATCGTTCTTTAGTCATAAG--AAACCAAAATTTAGGCTG-TGAGCA-TC  995

seq1  TCAAAAGAAGGAATTGTATGTTTCTTACAGAGTTTTTTATTTTAAAACAG  1050
      || |||||||||||| |||  ||||||||||||||||   ||||||||| 
seq2  TC-AAAGAAGGAATT-TATTGTTCTTACAGAGTTTTT--ATTTAAAACAA  1041

seq1  ATAAATGACCGTGTGGCTGACTTTGGAGGGTCTAAAAGTGGAATGGGTTG  1100
      || ||||| ||||| |||||| |||||||| |   |||||||   |||||
seq2  AT-AATGA-CGTGT-GCTGAC-TTGGAGGGCC---AAGTGGA--TGGTTG  1082

seq1  GTTTTATGACTTTCATATCCTTTGTGAA  1128
      |  ||||||||| || || |||||||||
seq2  G-CTTATGACTTCCA-AT-CTTTGTGAA  1107