BAC Information

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BAC

Clone NameB6Ng01-151O03
Chromosome14 (Build37)
Map Location 92,367,173 - 92,367,653
singlet/doubletsinglet
Overlap genenone
Upstream geneEG639558
Downstream geneEG665377, LOC638252
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151O03.bB6Ng01-151O03.g
ACCDH947593DH947594
length1,2091,038
definitionDH947593|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O03, 5' end.DH947594|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttatctttccaagacttttatcatgaaagggtgttggatcttg
tcaaatgctttctccacatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttctgtatattaaacc
atccctgaaatcctggaataaaacctacttggtcaggatggatgactgtt
ttaatgtgttcttggactgggttagcgagatttttatgttgtatttttgc
attgatattcataagggaaattagtctgaagttctcaatctttgttggat
ttttctgtagtttaggtttcagagtaattgtgacttcatagaatgaattg
ggtatagtaccttctgcctctattttgtggaatagtttgtgaagaacttt
aattagatcttctttgaacgtctgatagaactctgtactaaacccatctg
gtcctgggctttttttggttgggagactattaatgactgcttctatttca
ttaggggatataggactgtttatgtcattaacctgatcctgatttaactt
tagtacctggtatctgtctagaaatttttccatttcttcaaggttttcta
gttttgttgaatatagtgttttgtataagggtctgatggcattttcaatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggatgctgtccctgtgccttctagtgagtctggctaagggttcatcta
tcttgttgattttctcaaagaacacgatcctctttggatgattctttcaa
tagttcttcttgtttccacttggttgatttcgccaactgagtttgattat
ttcctaccttctactcctgttgggtgaattagcttccttttgttctagag
cttttagttttgttgtcaagaggctagtgtgtgctctctctagtttcttt
ttggaggcactcagagctttgagtttccctctagaatgctttcattgtgt
cccatacttttgggtatgttgggctttaatttcataactctaaaagtctt
tatttcttctttatcttccttgaccaaagtatcatggagaaggtgtttgt
tcattttccacggtgaaaggtggcttcccattatttaatgtgtttatgga
aatctgcctaccttagcaggggatatgtaggaagcctggaacaaatttca
atgggatct
gaattcctaaacacagagtcccccaccttcatcaatagtattgaagactc
catactgtctgctctcaggggatctaggtgagaaaaagacctgacaaggg
catgaaacaataaactacctgatatgcagaaagtaatgaagttctctgat
tctgagacaggaatttatcttttaccagcatccatgaatcctacaggcta
ctctgttggcttgaatgtagggtgaggtctcagaagagtcatagttgtag
aaatttctgtgagataagggaactatttcatgggtctcacacacttgaac
catgacacaaactttatataggtcagaaataaacactttctagaaaataa
tgggaggaattaagggaaagtaaagtgtttgttgtacaagtatgaagact
tcagttcagtccccagaacaagcataaaaatgctgctatagcagtacata
cttgaaatagatcctactcctgaggagacagagacaggtagatccttgaa
gctcattggacagcttcccagacctactctgagaaccaagccaatgacag
aacctacagacagttttctaaggaacaaacatcctaagttataatatagc
ttccacacatagacatacacaatcatacacaaattcatatgtacacacac
acaaagaggagaacacacagaaggggaagaaagcagcaccacataacaca
tttaagaatattccagtacccatggaaggagttacagagacggagtttgg
agctgagatgaaaggatggaccatgtagagactgccatagccagggatcc
accccataatcagcatccaaacgctgacaccattgcatacactagcaaga
ttttattgaaaaggacgcgatgtagctgtctcttgtgagactatgccggg
gcccagcaacacagaagtggatgctccacagtcagctaatggatggatat
aggggtcccatggagagctatgaaaagtagccaaggagctaagggactgc
accctatggtggaacaacatttatgagctaacagtacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_92367173_92367653
seq2: B6Ng01-151O03.g_893_1107 (reverse)

seq1  GGTACTGGTTAGTTCAT-AATGTTGTTCCACCCATAGGGTTGCAGATCCC  49
      |||||| ||||| |||| |||||||||||| |||||||| ||||| ||||
seq2  GGTACT-GTTAGCTCATAAATGTTGTTCCA-CCATAGGG-TGCAG-TCCC  46

seq1  TTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGCA  99
       |||||||||||| ||||||   ||||| ||||| ||||| ||||     
seq2  -TTAGCTCCTTGGCTACTTTTCATAGCT-CTCCA-TGGGACCCCT-----  88

seq1  GGATAAGCATTCTATGTTATATTAGAATATGTTTTGGGGTACATAAGAAA  149
        |||  ||| |        |||||                         
seq2  --ATATCCATCC--------ATTAG-------------------------  103

seq1  TTTTCCCTTGGGTGGAGTATTATCACCTTCAATATCCCAGTGATGTTCAT  199
         |  ||   |||||| ||                |||        | |
seq2  --CTGACT---GTGGAGCAT----------------CCA--------CTT  124

seq1  CTCTCATGCTGAGAATAAAAGCTGACACAAGTTACAGCATATTCTGAAAC  249
      || |  |||||            | | |      | ||||| |||    |
seq2  CTGTGTTGCTG------------GGCCC------CGGCATAGTCT----C  152

seq1  CCAATGAG---TATACAT-GCTGGGAATTAAAGAAATAAAAAATAATCTT  295
       ||| |||     ||||| ||      || || |||       || | | 
seq2  ACAA-GAGACAGCTACATCGCGTCCTTTTCAATAAAATCTTGCTAGTGTA  201

seq1  TGCAAGGGTACAAGGTCAGAGAGAAATAGAGTGAGAAGTGGTACAATTAA  345
      ||||| |||     |||||                               
seq2  TGCAATGGT-----GTCAG-------------------------------  215

seq1  TCTAATCCAGGGAAAGGAAACAAACCAGGGAGAGTTCTACTTAGGGGGTG  395
                                                        
seq2  --------------------------------------------------  215

seq1  GGTGGGAGATAAATACAGTAAGAGAAGGTAGAAGTTAAAACAATTTGAAA  445
                                                        
seq2  --------------------------------------------------  215

seq1  GCTGTCTGATAATGCTAGTGTATGCAATGGTGTCAG  481
                                          
seq2  ------------------------------------  215