BAC Information

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BAC

Clone NameB6Ng01-152A12
Chromosome14 (Build37)
Map Location 74,894,764 - 75,033,047
singlet/doubletdoublet
Overlap genenone
Upstream geneMed4, Nudt15, Sucla2, LOC100043734, EG629578, LOC629583
Downstream geneHtr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1, Cpb2, Zc3h13, Gm912, Spert
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152A12.bB6Ng01-152A12.g
ACCDH947706DH947707
length4851,123
definitionDH947706|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A12, 5' end.DH947707|Mus musculus domesticus DNA, BAC clone: B6Ng01-152A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,894,764 - 74,895,250)(75,031,937 - 75,033,047)
sequence
gaattcttattcagaattcagtgaatcttttttttgtgtgtgtgtttttt
gtcttttgaagcttcatgttttttttcctatctttcctgtttgctcttga
tttttttttaacttatagaaactctcttttgacctagaatgtcctgtatt
tgtaatgttatgttgttttctcatgattacgctattttatttgtctgaga
aataatgaattttgggttgttctattggcattccaagatcattaattgct
cttaaaatctctgatgataatcactgtgtgtgcatatgtgtatatgtgca
catgtatatatatatatatatatatatatatatatatatatatatatata
tatgctcatgtgtgtatgtttgtgtgctcatgtgtgtgtgtgcttgcctg
tgttcatgcccgtgttcatgtgtatgtgtgcatgtctgtgtgcacctgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattctgttttctgttcagtatcacaaaaacacttgttggatttgtctg
ccggatcaaacctggtttccacgttctgtttaaggggctatcaagagtaa
tggctgaagccctctccaagcatgaagaggcctctagattagctttatca
aaccagcatcatgagaaaagcaggctttgggtaggaagaaatatacccaa
agagaaagaaacacgtttgtgtttggagaagaggtatcttactcgtttgc
ttcttccataggaggctgcttctttcccaagtatgaccttgaccttgacc
tattttagaactttgcttcctttgtagtaagagggcaccatgagttaaag
gaagcctcgaacttttacatgattaaatgggtagactgtattatcagttt
ctgtgtcttccaatgagttaactaccgtgagtcactgtgacagagcattg
ccttccctgagagacaccaagatagcaaagtcaaatttgcaccttcagga
ggctacttttcaaatccaaatgactgttctttctgtctacctaatatcga
tgattcatgcggttaagccctcaggacattttataaatatctcagatggg
gtactgggaaccgttgaaatggctcagaacatgacttcaatttggtttct
tctaaggccacagaaaattactctccttgttcagttgttcatctcaaatt
agctcagctctgctctccaggatgaggtagcatgcttccttttggtatgt
cagctgtcttctaagacctggggttaactttcagtgacaaaagttgccag
aggcaagtgacttagaagcagcaaaggtttactatggctcagtttcagat
gatttctggggagtcacctggctctactgctttgggcctgtggtggctta
gtgccacacagtaagagcgtgtgttggaggcaactttaagcctttatagt
agtttcaggatcaggagactattaacctttccttcaggttagcctcaaga
attcttacttctcaaaggttttacctacttttcaataggggcattggctt
acgggtctaagtctttacctccattgtcctttggaggactacaagtttca
atatccaaatcacagcagactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74894764_74895250
seq2: B6Ng01-152A12.b_41_525

seq1  GAATTCTTATTCAGAATTCAGTGAATCTTTTTTTTGTGTGTGTGTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTCAGAATTCAGTGAATCTTTTTTTTGTGTGTGTGTTTTTT  50

seq1  GTCTTTTGAAGCTTCATGTTTTTTTTCCTATCTTTCCTGTTTGCTCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGAAGCTTCATGTTTTTTTTCCTATCTTTCCTGTTTGCTCTTGA  100

seq1  TTTTTTTTTAACTTATAGAAACTCTCTTTTGACCTAGAATGTCCTGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAACTTATAGAAACTCTCTTTTGACCTAGAATGTCCTGTATT  150

seq1  TGTAATGTTATGTTGTTTTCTCATGATTACGCTATTTTATTTGTCTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTTATGTTGTTTTCTCATGATTACGCTATTTTATTTGTCTGAGA  200

seq1  AATAATGAATTTTGGGTTGTTCTATTGGCATTCCAAGATCATTAATTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGAATTTTGGGTTGTTCTATTGGCATTCCAAGATCATTAATTGCT  250

seq1  CTTAAAATCTCTGATGATAATCACTGTGTGTGCATATGTGTATATGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATCTCTGATGATAATCACTGTGTGTGCATATGTGTATATGTGCA  300

seq1  CATGTATATATATATATATATATATATATATATATATATATATATATATA  350
      ||||  ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATG--TATATATATATATATATATATATATATATATATATATATATATA  348

seq1  TATATGCTCATGTGTGTATGTTTGTGTGCTCATGTGTGTGTGTGCTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCTCATGTGTGTATGTTTGTGTGCTCATGTGTGTGTGTGCTTGCC  398

seq1  TGTGTTCATGCCCGTGTTCATGTGTATGTGTGCATGTCTGTGTGCACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCATGCCCGTGTTCATGTGTATGTGTGCATGTCTGTGTGCACCTG  448

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  487
      |||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  485

seq1: chr14_75031937_75033047
seq2: B6Ng01-152A12.g_70_1192 (reverse)

seq1  CCAGTCTGCTGTGATTTGGAT-TTGAA--CTGT-GTCCCTCAAAGGACAA  46
      ||||||||||||||||||||| |||||   ||| ||||  ||||||||||
seq2  CCAGTCTGCTGTGATTTGGATATTGAAACTTGTAGTCCTCCAAAGGACAA  50

seq1  T-GTGGTAAAGACTT-GACCCGT-AGCC-ATGCCCCTATTGAAAAGTAGT  92
      | | ||||||||||| ||||||| |||| |||||||||||||||||||| 
seq2  TGGAGGTAAAGACTTAGACCCGTAAGCCAATGCCCCTATTGAAAAGTAGG  100

seq1  GAAAACCTTTGAGAAGT-AGAATTCTTGAGGCTAA-CTGAAGG-AAGGTT  139
       |||||||||||||||| ||||||||||||||||| ||||||| ||||||
seq2  TAAAACCTTTGAGAAGTAAGAATTCTTGAGGCTAACCTGAAGGAAAGGTT  150

seq1  AATAGTCTCCTGATCTTGAAACTACTAT-AAGGCTTAAAGTTGCCTCCAC  188
      ||||||||||||||| |||||||||||| |||||||||||||||||||| 
seq2  AATAGTCTCCTGATCCTGAAACTACTATAAAGGCTTAAAGTTGCCTCCAA  200

seq1  AACACGCTCTTACTGTGTGGCACTAAGCCACCACAGGCCCAAAGCAGTAG  238
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGCTCTTACTGTGTGGCACTAAGCCACCACAGGCCCAAAGCAGTAG  250

seq1  AGCCAGGTGACTCCCCAGAAATCATCTGAAACTGAGCCATAGTAAACCTT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGTGACTCCCCAGAAATCATCTGAAACTGAGCCATAGTAAACCTT  300

seq1  TGCTGCTTCTAAGTCACTTGCCTCTGGCAACTTTTGTCACTGAAAGTTAA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTCTAAGTCACTTGCCTCTGGCAACTTTTGTCACTGAAAGTTAA  350

seq1  CCCCAGGTCTTAGAAGACAGCTGACATACCAAAAGGAAGCATGCTACCTC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGTCTTAGAAGACAGCTGACATACCAAAAGGAAGCATGCTACCTC  400

seq1  ATCCTGGAGAGCAGAGCTGAGCTAATTTGAGATGAACAACTGAACAAGGA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGAGAGCAGAGCTGAGCTAATTTGAGATGAACAACTGAACAAGGA  450

seq1  GAGTAATTTTCTGTGGCCTTAGAAGAAACCAAATTGAAGTCATGTTCTGA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATTTTCTGTGGCCTTAGAAGAAACCAAATTGAAGTCATGTTCTGA  500

seq1  GCCATTTCAACGGTTCCCAGTACCCCATCTGAGATATTTATAAAATGTCC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTCAACGGTTCCCAGTACCCCATCTGAGATATTTATAAAATGTCC  550

seq1  TGAGGGCTTAACCGCATGAATCATCGATATTAGGTAGACAGAAAGAACAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCTTAACCGCATGAATCATCGATATTAGGTAGACAGAAAGAACAG  600

seq1  TCATTTGGATTTGAAAAGTAGCCTCCTGAAGGTGCAAATTTGACTTTGCT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGGATTTGAAAAGTAGCCTCCTGAAGGTGCAAATTTGACTTTGCT  650

seq1  ATCTTGGTGTCTCTCAGGGAAGGCAATGCTCTGTCACAGTGACTCACGGT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGTGTCTCTCAGGGAAGGCAATGCTCTGTCACAGTGACTCACGGT  700

seq1  AGTTAACTCATTGGAAGACACAGAAACTGATAATACAGTCTACCCATTTA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACTCATTGGAAGACACAGAAACTGATAATACAGTCTACCCATTTA  750

seq1  ATCATGTAAAAGTTCGAGGCTTCCTTTAACTCATGGTGCCCTCTTACTAC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTAAAAGTTCGAGGCTTCCTTTAACTCATGGTGCCCTCTTACTAC  800

seq1  AAAGGAAGCAAAGTTCTAAAATAGGTCAAGGTCAAGGTCATACTTGGGAA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGCAAAGTTCTAAAATAGGTCAAGGTCAAGGTCATACTTGGGAA  850

seq1  AGAAGCAGCCTCCTATGGAAGAAGCAAACGAGTAAGATACCTCTTCTCCA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGCCTCCTATGGAAGAAGCAAACGAGTAAGATACCTCTTCTCCA  900

seq1  AACACAAACGTGTTTCTTTCTCTTTGGGTATATTTCTTCCTACCCAAAGC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAACGTGTTTCTTTCTCTTTGGGTATATTTCTTCCTACCCAAAGC  950

seq1  CTGCTTTTCTCATGATGCTGGTTTGATAAAGCTAATCTAGAGGCCTCTTC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTCTCATGATGCTGGTTTGATAAAGCTAATCTAGAGGCCTCTTC  1000

seq1  ATGCTTGGAGAGGGCTTCAGCCATTACTCTTGATAGCCCCTTAAACAGAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGAGAGGGCTTCAGCCATTACTCTTGATAGCCCCTTAAACAGAA  1050

seq1  CGTGGAAACCAGGTTTGATCCGGCAGACAAATCCAACAAGTGTTTTTGTG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGAAACCAGGTTTGATCCGGCAGACAAATCCAACAAGTGTTTTTGTG  1100

seq1  ATACTGAACAGAAAACAGAATTC  1111
      |||||||||||||||||||||||
seq2  ATACTGAACAGAAAACAGAATTC  1123