BAC Information

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BAC

Clone NameB6Ng01-152G05
Chromosome14 (Build37)
Map Location 78,868,194 - 78,966,003
singlet/doubletdoublet
Overlap geneAkap11
Upstream geneD230005D02Rik, EG629678, Gm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180
Downstream geneDgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152G05.bB6Ng01-152G05.g
ACCDH947973DH947974
length1,116247
definitionDH947973|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G05, 5' end.DH947974|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,964,894 - 78,966,003)(78,868,194 - 78,868,440)
sequence
gaattctttagggaaatcaattttaatttagctgtaaaaatcaatccctt
tttaaattctaacatctggagtctctcttgcccacccaccccccaacctt
attctctgtctgtcaactgtgagattgttagatatggggtttacggttgg
ttaaaagagatggcagttttcaaactctacccagtacagttaggaatagc
ggaattagaaatggagcatcctcagagggactgttgacccctggggcggc
tttgccattggcttcctggtttcccttattctcactgcccaccccaaggg
agagaagcccttcctctcccttgtttctgctgtggcatccctcaggtgac
ttctgtgtcacagtctctgtcacattggtaatgataccttagcaatagga
ttccttcacaaagaagcaactagaacttttaaagagtggtaattgttttc
ttatatatataataagcaaaacattatttttctttatattgttttccaag
ttttgtttagagatatttatgttagaagaaaatatataaaagtttgttga
tatagagaacagagagctaaagacagctggactgtacctatctttttttt
tttttatagtactctctgttattttcaggtaaagaaatgaaaccaagact
gcattaactcaataataatgcttaagatagactccacagtatatgttata
ggtgagcagcttacttccgtttatataatttaagatataatatttacatt
atttaacatacttctatttttttgcacttccaagttttagttggaaaaga
aaaaccaaaccacagcctaaaaattattttaaaatccacataaaaatatt
tcctattagctacaagttacccatgcataaggactttgtaaatagtcagg
acatttcgtattatttacatttcaagagaaagtaatcaaaccagaagcac
acagggttacttatataatgcatttaaataaagacattttcatgctctac
tggatgctattcaagtgagaattatgcagtcaatatgtaagcaacacagg
agaagggaggggtgtggggacattagttctttgatagtgtagcgttgttc
acacaggtgtagccat
tcagctcctcctataccatgtctgcctggatgttgccatgttcctgcctt
gatgataatggactgaacctctgaacctgtaagctagcttcaattaaatg
tccttataagagttgccttggtcatggtgtctagcagtaaaaccctaact
aagacattagggaagataactacataatcagcatctaaaatttgttatta
gcaagagtgggggttgtgttttgtaatgttttgtggggtttggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78964894_78966003
seq2: B6Ng01-152G05.b_43_1158 (reverse)

seq1  ATGGCTA-ACCTGTGTGAACAACGCT--ACCATCAAAGACTAAATGT---  44
      ||||||| ||||||||||||||||||  || ||||||||   |||||   
seq2  ATGGCTACACCTGTGTGAACAACGCTACACTATCAAAGAACTAATGTCCC  50

seq1  CACACAACCTCCTTCTCCCTGGTTTGCTTACATATTGAACTGCATTATTC  94
      |||||  |  |||||| ||||  |||||||||||||| ||||||| ||||
seq2  CACACCCCTCCCTTCT-CCTGTGTTGCTTACATATTG-ACTGCATAATTC  98

seq1  T-ACTTTGATAGCAT-CAGTTGAGCATG-AAATGTCTTTATTTTAATGCA  141
      | ||||  ||||||| |||| ||||||| |||||||||||||| ||||||
seq2  TCACTTGAATAGCATCCAGTAGAGCATGAAAATGTCTTTATTTAAATGCA  148

seq1  TTTTATAAGTAACCCTGTGTGCTTCTGGGTTTGATTACTTTACTCTTGAA  191
      || ||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  TTATATAAGTAACCCTGTGTGCTTCT-GGTTTGATTACTTT-CTCTTGAA  196

seq1  ATGTAGATAATACGAAATGTCCTGACTATTTACAAAGT-CTTATGCATGG  240
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGTAAATAATACGAAATGTCCTGACTATTTACAAAGTCCTTATGCATGG  246

seq1  GTAACTTGTAGCTAATAGGAAATATTTTTATGTGGATTTTAAAATAATTT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTGTAGCTAATAGGAAATATTTTTATGTGGATTTTAAAATAATTT  296

seq1  TTAGGCTGTGGTTTGGTTTTTCTTTTCCAACTAAAACTTGGAAGTGCAAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTGTGGTTTGGTTTTTCTTTTCCAACTAAAACTTGGAAGTGCAAA  346

seq1  AAAATAGAAGTATGTTAAATAATGTAAATATTATATCTTAAATTATATAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGAAGTATGTTAAATAATGTAAATATTATATCTTAAATTATATAA  396

seq1  ACGGAAGTAAGCTGCTCACCTATAACATATACTGTGGAGTCTATCTTAAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAGTAAGCTGCTCACCTATAACATATACTGTGGAGTCTATCTTAAG  446

seq1  CATTATTATTGAGTTAATGCAGTCTTGGTTTCATTTCTTTACCTGAAAAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTATTGAGTTAATGCAGTCTTGGTTTCATTTCTTTACCTGAAAAT  496

seq1  AACAGAGAGTACTATAAAAAAAAAAAAAGATAGGTACAGTCCAGCTGTCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGAGTACTATAAAAAAAAAAAAAGATAGGTACAGTCCAGCTGTCT  546

seq1  TTAGCTCTCTGTTCTCTATATCAACAAACTTTTATATATTTTCTTCTAAC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTCTGTTCTCTATATCAACAAACTTTTATATATTTTCTTCTAAC  596

seq1  ATAAATATCTCTAAACAAAACTTGGAAAACAATATAAAGAAAAATAATGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATCTCTAAACAAAACTTGGAAAACAATATAAAGAAAAATAATGT  646

seq1  TTTGCTTATTATATATATAAGAAAACAATTACCACTCTTTAAAAGTTCTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTATTATATATATAAGAAAACAATTACCACTCTTTAAAAGTTCTA  696

seq1  GTTGCTTCTTTGTGAAGGAATCCTATTGCTAAGGTATCATTACCAATGTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTCTTTGTGAAGGAATCCTATTGCTAAGGTATCATTACCAATGTG  746

seq1  ACAGAGACTGTGACACAGAAGTCACCTGAGGGATGCCACAGCAGAAACAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACTGTGACACAGAAGTCACCTGAGGGATGCCACAGCAGAAACAA  796

seq1  GGGAGAGGAAGGGCTTCTCTCCCTTGGGGTGGGCAGTGAGAATAAGGGAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGAAGGGCTTCTCTCCCTTGGGGTGGGCAGTGAGAATAAGGGAA  846

seq1  ACCAGGAAGCCAATGGCAAAGCCGCCCCAGGGGTCAACAGTCCCTCTGAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAAGCCAATGGCAAAGCCGCCCCAGGGGTCAACAGTCCCTCTGAG  896

seq1  GATGCTCCATTTCTAATTCCGCTATTCCTAACTGTACTGGGTAGAGTTTG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCCATTTCTAATTCCGCTATTCCTAACTGTACTGGGTAGAGTTTG  946

seq1  AAAACTGCCATCTCTTTTAACCAACCGTAAACCCCATATCTAACAATCTC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGCCATCTCTTTTAACCAACCGTAAACCCCATATCTAACAATCTC  996

seq1  ACAGTTGACAGACAGAGAATAAGGTTGGGGGGTGGGTGGGCAAGAGAGAC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGACAGACAGAGAATAAGGTTGGGGGGTGGGTGGGCAAGAGAGAC  1046

seq1  TCCAGATGTTAGAATTTAAAAAGGGATTGATTTTTACAGCTAAATTAAAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATGTTAGAATTTAAAAAGGGATTGATTTTTACAGCTAAATTAAAA  1096

seq1  TTGATTTCCCTAAAGAATTC  1110
      ||||||||||||||||||||
seq2  TTGATTTCCCTAAAGAATTC  1116

seq1: chr14_78868194_78868440
seq2: B6Ng01-152G05.g_75_321

seq1  TCAGCTCCTCCTATACCATGTCTGCCTGGATGTTGCCATGTTCCTGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTCCTATACCATGTCTGCCTGGATGTTGCCATGTTCCTGCCTT  50

seq1  GATGATAATGGACTGAACCTCTGAACCTGTAAGCTAGCTTCAATTAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAATGGACTGAACCTCTGAACCTGTAAGCTAGCTTCAATTAAATG  100

seq1  TCCTTATAAGAGTTGCCTTGGTCATGGTGTCTAGCAGTAAAACCCTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATAAGAGTTGCCTTGGTCATGGTGTCTAGCAGTAAAACCCTAACT  150

seq1  AAGACATTAGGGAAGATAACTACATAATCAGCATCTAAAATTTGTTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTAGGGAAGATAACTACATAATCAGCATCTAAAATTTGTTATTA  200

seq1  GCAAGAGTGGGGGTTGTGTTTTGTAATGTTTTGTGGGGTTTGGGGTG  247
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGTGGGGGTTGTGTTTTGTAATGTTTTGTGGGGTTTGGGGTG  247