BAC Information

Click to search

BAC

Clone NameB6Ng01-152G14
Chromosome14 (Build37)
Map Location 108,233,361 - 108,234,218
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754
Downstream geneLOC668757, EG668761
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152G14.bB6Ng01-152G14.g
ACCDH947991DH947992
length1,2351,110
definitionDH947991|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G14, 5' end.DH947992|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtggctggtaaaatatcttttgcaagtctttttttttttctgt
gatagactttaattaaccaaaatggtcaaattagctttctaatttacaga
aagtattttctatatttcatataggatgagaaaagtaggtatcaaatgtt
taaataatccattatcctataatttcccttactgtttcgtggttgccagt
tatatatttgacaccgtgatgttctttggagaaacagaaacatcaattga
gaaaatgcccccatattatcaggctgtagacaggcctataaggaattttc
ttagtgtttgatgtaggacagcaagacttattgcaggtgggccattcttg
ggctggtggtcctgggatcgatcagataggctttccctagaagcagatga
aagccagtggagatacccacagcaagaaatttttaaaggttttcttttct
ttcacctatgtttatatgtgtgcttgtttattggatgctttacatttcaa
atggtatccattttccctgttttcccttggaaacccactatcccatcact
ctctccctgcttctatgagggggctccccaaaccacccacccactccctt
ctcagtgacctggcattcccctacacaggagcaccatccagccttcacag
gacccaggtcctctccttctattgataaccaacaaggccatcctctgcag
catatgcagctggagtcatgggtccctccatttgtactctttggatggtg
gtttagtccctgagagctctgggggcatctacttggttgatatttttgtt
cttcatatgggattacaaaccccttcagttccttcagtccttttttctaa
ctctacccttgaggacaccatgcttgtttcaagggacctttggaattttt
ttccagcctttagtcttatgtcatgcctttcttttgtcactgagatgtga
ttcatgtatgcagcaaaatgatgggtcctgtttagatccaatgttaatca
tgtctttttattgggaatgagttcattgatatagagatataaaggaaaag
tggaatgtgccttcttttgttttgtgtagagtgaatatgtttgtgctgct
acttcttggattggtgaaacttatttttgcttttcgaggtgaagtttcac
atctcgtggtgggaatcatcattccttagcaggcctggcatcgggagaag
aactggtgtagaattactgcatctatatgcgttag
gaattctctttttaactctgttttccattttaatagggttatttggttct
ctagagtctaatttcttgagttctttgtatatatttgctattatgccagt
atttatatagtaaaaatggccatcttgcctaaagcaatccccatcaaaat
tccaacttaatttttcatagagttagaaagagcaattctcaaattcattt
ggagtaacaaaaaatcctggagataacctcaagctacattacagagcaat
agcaatagagtctgcatggtattgttatagtgacaggcagtaagaacaat
ggaataatattgaagacacaaaaatgaacccatacacctatggtcacttt
atctttgacaaaggagctaaaaccatccagtggaaaaaagacagcatttt
caacaaattgtgctggtttgagtagtgttcatcatgtagaagaatgcaaa
ttgatccattcttatctccttgtacaaagttcaagtccaagtggatcaag
gacctccacataaagccagatacactgagtctaataggacaccaatggct
tatgctctaaaacaaagaaccgaagaaggggatctcataaaattacaatg
cttctgtattgcaaaggtcactgtccgtagggcaaaatggcaaccaaaga
tttacagcagatcattaccaagcctacatctgatagagagctaacaaatc
caacatatctattttcagtggaagaagaaaaaaaaattaaacaccagcaa
aacaaaagtcttaaaatagctacatgtttctacacttgcacaaatgtttc
ctgttttcattcaaaacatattactacatgactccagtcccaagggaaat
ttttaatcaagttttagccataaacatgtgtaactattgtaatgattttc
cttattgttcatttaacttagtgagaaaatagactgttttattatttttt
tgtttctgcctgaaaaaattaaacataattggaacctctttacattcaag
atttatatatcttatgtcacgcttatcataggatatcacatttccagata
ctaactctaatatttggttaaatggatcgtgggccattattttctgactt
aaattaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108233361_108234218
seq2: B6Ng01-152G14.g_326_1178

seq1  GAGTCTGCATGGTATTGTTATAGTGACAGGCAGTAAGAACAATGGAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGCATGGTATTGTTATAGTGACAGGCAGTAAGAACAATGGAATAA  50

seq1  TATTGAAGACACAAAAATGAACCCATACACCTATGGTCACTTTATCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGACACAAAAATGAACCCATACACCTATGGTCACTTTATCTTTG  100

seq1  ACAAAGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAA  150

seq1  TTGTGCTGGTTTGAGTAGTGTTCATCATGTAGAAGAATGCAAATTGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTGGTTTGAGTAGTGTTCATCATGTAGAAGAATGCAAATTGATCC  200

seq1  ATTCTTATCTCCTTGTACAAAGTTCAAGTCCAAGTGGATCAAGGACCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATCTCCTTGTACAAAGTTCAAGTCCAAGTGGATCAAGGACCTCC  250

seq1  ACATAAAGCCAGATACACTGAGTCTAATAGGACACCAATGGCTTATGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGCCAGATACACTGAGTCTAATAGGACACCAATGGCTTATGCTC  300

seq1  TAAAACAAAGAACCGAAGAAGGGGATCTCATAAAATTACAATGCTTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAGAACCGAAGAAGGGGATCTCATAAAATTACAATGCTTCTGT  350

seq1  ATTGCAAAGGTCACTGTCCGTAGGGCAAAATGGCAACCAAAGATTTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAAGGTCACTGTCCGTAGGGCAAAATGGCAACCAAAGATTTACAG  400

seq1  CAGATCATTACCAAGCCTACATCTGATAGAGAGCTAACAAATCCAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCATTACCAAGCCTACATCTGATAGAGAGCTAACAAATCCAACATA  450

seq1  TCTATTTTCAGTGGAAGAAGAAAAAAAAATTAAACACCAGCAAAACAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTCAGTGGAAGAAGAAAAAAAAATTAAACACCAGCAAAACAAAA  500

seq1  GTCTTAAAATAGCTACATGTTTCTACACTTGCACAAATGTTTCCTGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAAATAGCTACATGTTTCTACACTTGCACAAATGTTTCCTGTTTT  550

seq1  CATTCAAAACATATTACTACATGACTCCAGTCCCAAGGGAAATTTTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAAAACATATTACTACATGACTCCAGTCCCAAGGGAAATTTTTAAT  600

seq1  CAAGTTTTAGCCATAAACATGTGTAACTATTGTAATGATTTTCCTTATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTAGCCATAAACATGTGTAACTATTGTAATGATTTTCCTTATTG  650

seq1  TTCATTTAACTTAGTGAGAAAATAGACTGTTTTATTA-TTTTTTGTTTCT  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCATTTAACTTAGTGAGAAAATAGACTGTTTTATTATTTTTTTGTTTCT  700

seq1  GCCTGAAAAAATTAAAACATAATTGGAACCTCTTTACAATCCAAGATTTA  749
      ||||||||||||| ||||||||||||||||||||||| || |||||||||
seq2  GCCTGAAAAAATT-AAACATAATTGGAACCTCTTTAC-ATTCAAGATTTA  748

seq1  TATATCTTATGTCACGCTTATCATAGGATATCAACATTTCCAGATACTAA  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATATCTTATGTCACGCTTATCATAGGATATC-ACATTTCCAGATACTAA  797

seq1  CTCTTAATATTTTGGTTAATATGATCGT-GGCATTTATTTCCTGACTTTA  848
      ||| ||||| |||||||||   |||||| |||  |||||| |||||||  
seq2  CTC-TAATA-TTTGGTTAAATGGATCGTGGGCCATTATTTTCTGACTT--  843

seq1  AAATTAAAAA  858
      ||||||||||
seq2  AAATTAAAAA  853