BAC Information

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BAC

Clone NameB6Ng01-153D20
Chromosome14 (Build37)
Map Location 80,312,906 - 80,420,670
singlet/doubletdoublet
Overlap geneEG629734, Olfm4
Upstream gene1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153D20.bB6Ng01-153D20.g
ACCDH948610DH948611
length9431,083
definitionDH948610|Mus musculus domesticus DNA, BAC clone: B6Ng01-153D20, 5' end.DH948611|Mus musculus domesticus DNA, BAC clone: B6Ng01-153D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,419,730 - 80,420,670)(80,312,906 - 80,313,982)
sequence
gaattccataaagccacattttaaagtttgatatctcagaaataaggggg
gaaagttgatattgtgtacattttcttctcccagatcgcatttttcaagt
atcttaattttctgtagcaaaattgagaaagtaatatcattctaggaaca
cattctttcctcataaagccctacttatcagggtcagccctaggaaaaac
tatgattaatgaaagataatcctagggggagtcttcctgcctttcctggg
acaccgaggaggaggaggaggagaagaagggaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaaagaaaagaaaagaaaagaaaagaagtt
gtttttttaaatacagcatctgatacgtccaaacagatagtcctatgaga
atgggatttcagccttgagaagctacagagtcatttagcaatggacatcc
catcacctaagtcatttgctgaccatctttcctcagagctttagatgagc
cctgctcttcataacccatgtgctactgcccccatagaatggcaggcaag
tatttcatccttcccattctgacacagccattgtacaaacatgtgtacaa
acacatggcaccagatgcactgatctattgaatcttcatttccatgtaac
ccttggataagttaacccagtgggcaactggtcatttatttgtatactct
ccaaaaatgcctgccaaccaaaagggtttgtgatatatatatatatgatt
tctccagcatctttcataacatctatccaaagaactggacacacattaac
tgggtgtttataacaaatattggtcttttaaaacatagtaagatacttta
ttggataacaatgaaaatattctaatgtttggtacatttgaggtcatttt
ccttgtttgctgtttccattatggagggaaaaggacgaaagaa
gaattctgttctgataaggaccctgagttctgtggatggtttagagtctg
tgtgataagactaccaattggcatcatgttacatgtctgcattaactgca
ggagaggggtacacacagacattcaaaatggtggggttgtagcgcgcggt
tgtgactctaggaaaagaaagaacacactccacactcccgtaagcaggat
ctttgtcttctgagtctgctcccatttttaggttgactgactctcatggt
tcaggctcatttttcttgagggggaaaaaaaagcaacaccctgaaatatt
gagagagtctttccctaaactccaagtctctctgcagcacagcccatgtt
cagactgtcagtctgatgcccaggttgtcattttcttcctgctgctcccc
tccctagagcctggtggagtctccttgaggcagctgaaggagtgacaggt
agatatgctgcagaggtgggctgtttaaggcagtcacatgaggtgtggaa
aatgtgatttataggttttttttctccccccaggggaaaatagatttcat
tattttccacctcaggtaaggggtaaacctctgggcttgaccttggaagg
ttgttcagctataacagtgtggctgaaatgctgatatagactaaaacctc
attaaatcaatattggttatccaaaatcatgcttgattggatgcaactgc
ttttcctcagctgcctgatgtcccactctttattgggcaaaaatatgaga
tgctctaaagtgagttaagctggttgagattttctggtccttagagcttc
aaattaataaggtttttattatttttgcaaattgaagacagtttctaaaa
cacccaagtccaatattgattattaatctactactgtcacatgtatgttt
attaataaagagtcctgtcttgttccagtaaaaagtcatgcattttctct
tcctgttatgcaggtgtataagggcttaatggaataataaacttattggg
tctctaggcaaatgggaacctagtaaattaacaccaatggctaataatcc
atggtcaacgggcaactgggacacgcacattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80419730_80420670
seq2: B6Ng01-153D20.b_45_987 (reverse)

seq1  TTCTTTCCTTCCTTCCTTTTCCCTCCATAATTGGAGCAGCAAACAAGGAA  50
      ||||||     | |||||||||||||||||| | | ||||||||||||||
seq2  TTCTTT-----CGTCCTTTTCCCTCCATAATGGAAACAGCAAACAAGGAA  45

seq1  AATGACCTCAAATGTACCAAACATTAG-ATATTTTCATTGTTATCCAATA  99
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AATGACCTCAAATGTACCAAACATTAGAATATTTTCATTGTTATCCAATA  95

seq1  AAGTATCTTACTATGTTTT-AAAGACCAATATTTGTTAT-AACA-CCAGT  146
      ||||||||||||||||||| ||||||||||||||||||| |||| |||||
seq2  AAGTATCTTACTATGTTTTAAAAGACCAATATTTGTTATAAACACCCAGT  145

seq1  TAATGTGTGTCCAGTTCTTTGGATAGATGTTATG-AAGATGCTGGAGAAA  195
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAATGTGTGTCCAGTTCTTTGGATAGATGTTATGAAAGATGCTGGAGAAA  195

seq1  TCATATATATATATATCACAAACCCTTTTGGTTGGCAGGCA-TTTTGGAG  244
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCATATATATATATATCACAAACCCTTTTGGTTGGCAGGCATTTTTGGAG  245

seq1  AGTATACAAATAAATGACCAGTTGCCCACTGGGTTAACTTATCCAAGGGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACAAATAAATGACCAGTTGCCCACTGGGTTAACTTATCCAAGGGT  295

seq1  TACATGG-AATGAAGATTCAATAGATCAGTGCATCTGGTGCCATGTGTTT  343
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGAAATGAAGATTCAATAGATCAGTGCATCTGGTGCCATGTGTTT  345

seq1  GTACACATGTTTGTACAATGGCTGTGTCAGAATGGGAAGGATGAAATACT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACATGTTTGTACAATGGCTGTGTCAGAATGGGAAGGATGAAATACT  395

seq1  TGCCTGCCATTCTATGGGGGCAGTAGCACATGGGTTATGAAGAGCAGGGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCATTCTATGGGGGCAGTAGCACATGGGTTATGAAGAGCAGGGC  445

seq1  TCATCTAAAGCTCTGAGGAAAGATGGTCAGCAAATGACTTAGGTGATGGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAAAGCTCTGAGGAAAGATGGTCAGCAAATGACTTAGGTGATGGG  495

seq1  ATGTCCATTGCTAAATGACTCTGTAGCTTCTCAAGGCTGAAATCCCATTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATTGCTAAATGACTCTGTAGCTTCTCAAGGCTGAAATCCCATTC  545

seq1  TCATAGGACTATCTGTTTGGACGTATCAGATGCTGTATTTAAAAAAACAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGACTATCTGTTTGGACGTATCAGATGCTGTATTTAAAAAAACAA  595

seq1  CTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCT  645

seq1  TTCTTTCTTTCTTTCTTCCCTTCTTCTCCTCCTCCTCCTCCTCGGTGTCC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTCCCTTCTTCTCCTCCTCCTCCTCCTCGGTGTCC  695

seq1  CAGGAAAGGCAGGAAGACTCCCCCTAGGATTATCTTTCATTAATCATAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGGCAGGAAGACTCCCCCTAGGATTATCTTTCATTAATCATAGT  745

seq1  TTTTCCTAGGGCTGACCCTGATAAGTAGGGCTTTATGAGGAAAGAATGTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTAGGGCTGACCCTGATAAGTAGGGCTTTATGAGGAAAGAATGTG  795

seq1  TTCCTAGAATGATATTACTTTCTCAATTTTGCTACAGAAAATTAAGATAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGAATGATATTACTTTCTCAATTTTGCTACAGAAAATTAAGATAC  845

seq1  TTGAAAAATGCGATCTGGGAGAAGAAAATGTACACAATATCAACTTTCCC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAATGCGATCTGGGAGAAGAAAATGTACACAATATCAACTTTCCC  895

seq1  CCCTTATTTCTGAGATATCAAACTTTAAAATGTGGCTTTATGGAATTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATTTCTGAGATATCAAACTTTAAAATGTGGCTTTATGGAATTC  943

seq1: chr14_80312906_80313982
seq2: B6Ng01-153D20.g_68_1150

seq1  GAATTCTGTTCTGATAAGGACCCTGAGTTCTGTGGATGGTTTAGAGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTGATAAGGACCCTGAGTTCTGTGGATGGTTTAGAGTCTG  50

seq1  TGTGATAAGACTACCAATTGGCATCATGTTACATGTCTGCATTAACTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATAAGACTACCAATTGGCATCATGTTACATGTCTGCATTAACTGCA  100

seq1  GGAGAGGGGTACACACAGACATTCAAAATGGTGGGGTTGTAGCGCGCGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGGTACACACAGACATTCAAAATGGTGGGGTTGTAGCGCGCGGT  150

seq1  TGTGACTCTAGGAAAAGAAAGAACACACTCCACACTCCCGTAAGCAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCTAGGAAAAGAAAGAACACACTCCACACTCCCGTAAGCAGGAT  200

seq1  CTTTGTCTTCTGAGTCTGCTCCCATTTTTAGGTTGACTGACTCTCATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTTCTGAGTCTGCTCCCATTTTTAGGTTGACTGACTCTCATGGT  250

seq1  TCAGGCTCATTTTTCTTGAGGGGGAAAAAAAAGCAACACCCTGAAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTCATTTTTCTTGAGGGGGAAAAAAAAGCAACACCCTGAAATATT  300

seq1  GAGAGAGTCTTTCCCTAAACTCCAAGTCTCTCTGCAGCACAGCCCATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTCTTTCCCTAAACTCCAAGTCTCTCTGCAGCACAGCCCATGTT  350

seq1  CAGACTGTCAGTCTGATGCCCAGGTTGTCATTTTCTTCCTGCTGCTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTCAGTCTGATGCCCAGGTTGTCATTTTCTTCCTGCTGCTCCCC  400

seq1  TCCCTAGAGCCTGGTGGAGTCTCCTTGAGGCAGCTGAAGGAGTGACAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGAGCCTGGTGGAGTCTCCTTGAGGCAGCTGAAGGAGTGACAGGT  450

seq1  AGATATGCTGCAGAGGTGGGCTGTTTAAGGCAGTCACATGAGGTGTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGCTGCAGAGGTGGGCTGTTTAAGGCAGTCACATGAGGTGTGGAA  500

seq1  AATGTGATTTATAGGTTTTTTTTCTCCCCCCAGGGGAAAATAGATTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGATTTATAGGTTTTTTTTCTCCCCCCAGGGGAAAATAGATTTCAT  550

seq1  TATTTTCCACCTCAGGTAAGGGGTAAACCTCTGGGCTTGACCTTGGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCACCTCAGGTAAGGGGTAAACCTCTGGGCTTGACCTTGGAAGG  600

seq1  TTGTTCAGCTATAACAGTGTGGCTGAAATGCTGATATAGACTAAAACCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAGCTATAACAGTGTGGCTGAAATGCTGATATAGACTAAAACCTC  650

seq1  ATTAAATCAATATTGGTTATCCAAAATCATGCTTGATTGGATGCAACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCAATATTGGTTATCCAAAATCATGCTTGATTGGATGCAACTGC  700

seq1  TTTTCCTCAGCTGCCTGATGTCCCACTCTTTATTGGGCAAAAATATGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCAGCTGCCTGATGTCCCACTCTTTATTGGGCAAAAATATGAGA  750

seq1  TGCTCTAAAGTGAGTTAAGCT-GTTGAGATTTTCTGGTCCTTAGAGCTTC  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGCTCTAAAGTGAGTTAAGCTGGTTGAGATTTTCTGGTCCTTAGAGCTTC  800

seq1  AAATTAATAAGG-TTTTATTA-TTTTGCAAATTGAAGACAG-TTCTAAAA  846
      |||||||||||| |||||||| ||||||||||||||||||| ||||||||
seq2  AAATTAATAAGGTTTTTATTATTTTTGCAAATTGAAGACAGTTTCTAAAA  850

seq1  CA-CCAAGTCCAATATTGATTA-TAATCTACTACTGTCACATGTATGTTT  894
      || ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CACCCAAGTCCAATATTGATTATTAATCTACTACTGTCACATGTATGTTT  900

seq1  ATTAATAAAAGAGTCCTGTC-TGTTCCAGTAAAAAAGTCATGCATTTTCT  943
      |||||| ||||||||||||| ||||||||| |||||||||||||||||||
seq2  ATTAAT-AAAGAGTCCTGTCTTGTTCCAGT-AAAAAGTCATGCATTTTCT  948

seq1  CTTCCTGTTTATGCAGGTGTAT-AGGGCTTATTGGAATAAATAAACTTAT  992
      ||||||| |||||||||||||| |||||||| |||||| |||||||||||
seq2  CTTCCTG-TTATGCAGGTGTATAAGGGCTTAATGGAAT-AATAAACTTAT  996

seq1  T-GGTCCCTAGGCAAAT-GGAACCTATGTAAATAAACAACCAATGGCTAA  1040
      | |||| |||||||||| |||||||| |||||| ||| ||||||||||||
seq2  TGGGTCTCTAGGCAAATGGGAACCTA-GTAAATTAAC-ACCAATGGCTAA  1044

seq1  TTATCCATGG-CAACGGGCAACTGGGACA-GCACATTGA  1077
      | |||||||| |||||||||||||||||| |||||||||
seq2  TAATCCATGGTCAACGGGCAACTGGGACACGCACATTGA  1083