BAC Information

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BAC

Clone NameB6Ng01-154E10
Chromosome14 (Build37)
Map Location 110,873,089 - 110,874,211
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154E10.bB6Ng01-154E10.g
ACCDH949364DH949365
length1,2321,106
definitionDH949364|Mus musculus domesticus DNA, BAC clone: B6Ng01-154E10, 5' end.DH949365|Mus musculus domesticus DNA, BAC clone: B6Ng01-154E10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcaggaactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtatgagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagatggacataaaataaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaatacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaagcttcacgtctc
tgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatgc
tcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaagc
aatctacagattcaatgcaattcccatcaaaattccaactcaattcttca
atgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacct
aggatagcaaaaagtcttctcaaggataaaagaacctctggtggaatcac
catgcctgacctaaagctttactacagagcaattgtgataaaaactgcat
ggtactggtatagagacagacaagtagaccaatggaacagaattgaagac
ccagaaatgaacccacacacctatggtcacgtgatcttcgacaagggagc
taaaaccatccagtagaagaaagacagcattttcacaattggtgctggca
caactgcttgttatcatgtagaagatgcgaattgatccatacttatctct
tgtactaagtcaatctagtggatcaggacttacataaacagagaaactga
aacttatagaggagaagtggggaaagctcgagaaatgggcacaggaaaat
ctgacagaacgcaatggcttgtgctgtaagatcgatgacaatggactatg
attccaaggatctgcaggcaagaccggtcaaagaccaagaaccccacgaa
tgatgaggacttttcaatctcttacatgcgag
gaattcaaatatagttgtaggcttgcagtaagacatgatttcacgtcgac
aatgccagtagcttgttgccctcaaagccctgtcaagctgtgatagacag
ttgtgcttttgcaaggaaatttggacacctctgcttctttatctggttgc
acgttatgtgaaaccaggtcccacaccctgaattattgtgaagtagacaa
tttccaaagagttcatcaaaaaatttctgttctaatatccagtgtatcca
atgaaaatacaactgaaattgccctacatctctttgttattatttataac
ttgggattttcacttgtatgaattaatttaatctttaccaagtactaaga
gaatttttaaatatttttgtgagacaaacacattttgccaatatttatat
tgattgcgtctagtacaattatttgatattagtgttgtaatatatgttta
aaaatttgataaatggtgatgattgggttatataattcccgtccattagg
acatgtattttagaaactatggtgatatctaataatctttgttgattggg
catcataagcagcagaattggtgaccatagtgtaaggcacattctgaaat
tcatgacgggctttatcctatatatttacaacttaaaagattatttgtca
tattcactataactaattacagtggctttgcattatctctgatgagcagc
tattatataaagtacaaaatattccaatttatagaaatccttagggtaac
ccccaaagagatagatacccttgtttaattttctaaaattttctacaact
ttctacaatgaatagccccggtagtgccctgtctcaacacaagaaaattc
tgtgcagggtaaagggatatcaaatcactgattgtgttgcttacagagga
agggattttgctgatgtaattaaggcccctaaatgagcagcattggatta
ctcaaaagggaaatttccagatatatactgaaatatatgagtctttgaaa
cagacttggtatttctgaaggcagacctcagacacagagatctactgccg
atggctattcttagagagcagctgcattcattacagttaatcgaattatt
ctatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110873089_110874211
seq2: B6Ng01-154E10.g_68_1173

seq1  GAATTCAAATATAGTTGTAGGCTTGCAGTAAGACATGATTTCACGTCGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATAGTTGTAGGCTTGCAGTAAGACATGATTTCACGTCGAC  50

seq1  AATGCCAGTAGCTTGTTGCCCTCAAAGCCCTGTCAAGCTGTGATAGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGTAGCTTGTTGCCCTCAAAGCCCTGTCAAGCTGTGATAGACAG  100

seq1  TTGTGCTTTTGCAAGGAAATTTGGACACCTCTGCTTCTTTATCTGGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTTTGCAAGGAAATTTGGACACCTCTGCTTCTTTATCTGGTTGC  150

seq1  ACGTTATGTGAAACCAGGTCCCACACCCTGAATTATTGTGAAGTAGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTATGTGAAACCAGGTCCCACACCCTGAATTATTGTGAAGTAGACAA  200

seq1  TTTCCAAAGAGTTCATCAAAAAATTTCTGTTCTAATATCCAGTGTATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAGAGTTCATCAAAAAATTTCTGTTCTAATATCCAGTGTATCCA  250

seq1  ATGAAAATACAACTGAAATTGCCCTACATCTCTTTGTTATTATTTATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATACAACTGAAATTGCCCTACATCTCTTTGTTATTATTTATAAC  300

seq1  TTGGGATTTTCACTTGTATGAATTAATTTAATCTTTACCAAGTACTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATTTTCACTTGTATGAATTAATTTAATCTTTACCAAGTACTAAGA  350

seq1  GAATTTTTAAATATTTTTGTGAGACAAACACATTTTGCCAATATTTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTAAATATTTTTGTGAGACAAACACATTTTGCCAATATTTATAT  400

seq1  TGATTGCGTCTAGTACAATTATTTGATATTAGTGTTGTAATATATGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCGTCTAGTACAATTATTTGATATTAGTGTTGTAATATATGTTTA  450

seq1  AAAATTTGATAAATGGTGATGATTGGGTTATATAATTCCCGTCCATTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGATAAATGGTGATGATTGGGTTATATAATTCCCGTCCATTAGG  500

seq1  ACATGTATTTTAGAAACTATGGTGATATCTAATAATCTTTGTTGATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATTTTAGAAACTATGGTGATATCTAATAATCTTTGTTGATTGGG  550

seq1  CATCATAAGCAGCAGAATTGGTGACCATAGTGTAAGGCACATTCTGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAAGCAGCAGAATTGGTGACCATAGTGTAAGGCACATTCTGAAAT  600

seq1  TCATGACGGGCTTTATCCTATATATTTACAACTTAAAAGATTATTTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACGGGCTTTATCCTATATATTTACAACTTAAAAGATTATTTGTCA  650

seq1  TATTCACTATAACTAATTACAGTGGCTTTGCATTATCTCTGATGAGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTATAACTAATTACAGTGGCTTTGCATTATCTCTGATGAGCAGC  700

seq1  TATTATATAAAGTACAAAATATTCCAATTTATAGAAATCCTTAGGGTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATAAAGTACAAAATATTCCAATTTATAGAAATCCTTAGGGTAAC  750

seq1  CCCCAAAGAGATAGATACCCTTGTTTAATTTTCTAAAATTTTCTACAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAGAGATAGATACCCTTGTTTAATTTTCTAAAATTTTCTACAACT  800

seq1  TTCTACAATGAATAGCCCCGGTAGTGCCCTGTCTCAACACAAGAAAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAATGAATAGCCCCGGTAGTGCCCTGTCTCAACACAAGAAAATTC  850

seq1  TGTGCAGGGTAAAGGGATATCAAATCACTGATTGTGTTGCTTACAAGAGG  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTGCAGGGTAAAGGGATATCAAATCACTGATTGTGTTGCTTAC-AGAGG  899

seq1  AAGGGATTTTGCTGATGTAATTAAGGCCCCTAAATGAGCAGCATTGGATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATTTTGCTGATGTAATTAAGGCCCCTAAATGAGCAGCATTGGATT  949

seq1  ACTCAAAAGGGAAAATTTCCAGGATATTAATAACTGAAATATATGAGGTC  1000
      ||||||||||| ||||||||| |||||  || |||||||||||||| |||
seq2  ACTCAAAAGGG-AAATTTCCA-GATAT--AT-ACTGAAATATATGA-GTC  993

seq1  TTTGAAACAGGAACTTGGTATTTCTGAAGGCAGACCTCCAGGACACAGAG  1050
      ||||||||||  ||||||||||||||||||||||||||   |||||||||
seq2  TTTGAAACAG--ACTTGGTATTTCTGAAGGCAGACCTC--AGACACAGAG  1039

seq1  ATTCCTACTGCAGATGGCTA-TCTTAGGAGAAGCCAGCTGCCATCCATTA  1099
      ||  ||||||| |||||||| ||||| ||||   |||||| ||| |||||
seq2  AT--CTACTGCCGATGGCTATTCTTA-GAGA--GCAGCTG-CATTCATTA  1083

seq1  CAGTCTATCAGAATAATTCTATCA  1123
      ||||  ||| |||| |||||||||
seq2  CAGTTAATC-GAATTATTCTATCA  1106