BAC Information

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BAC

Clone NameB6Ng01-154H23
Chromosome14 (Build37)
Map Location 112,813,051 - 112,930,355
singlet/doubletdoublet
Overlap geneEG223186
Upstream geneSlitrk5, LOC100043501
Downstream geneLOC100043509, Tpm3-rs7, LOC100043510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154H23.bB6Ng01-154H23.g
ACCDH949525DH949526
length1,0051,140
definitionDH949525|Mus musculus domesticus DNA, BAC clone: B6Ng01-154H23, 5' end.DH949526|Mus musculus domesticus DNA, BAC clone: B6Ng01-154H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,929,686 - 112,930,355)(112,813,051 - 112,814,202)
sequence
gaattcagggcacagggaaacacatatcagcagcaaaatgagtgtagaga
aaggtaatcaattttaatgcaaaatatatgttgaggctgagagctcagtg
agttgattgctatttcgtttgaatttaactcaagttaaaatttgggtttt
ttttgcagtttttattaactcatttattcactttacatcccagtatcagc
cccccaccccccggcctatatttcctttcccctcacagcttctccctcat
tcaccctccccttctcctttgagaagggggaggtccccactggtttcacc
accaccctggcacatcaactcattccagaactagctgcaacctctctctt
tgaggcaagagaagacagtcctataaggatccacatgcaggcaactaatt
caggaatagactctattgttgggaaatctgcatgaagacccagttataca
tctgcaatatatgtgctgggcacctaggtccagcccatgtatgatatttg
gttggtgattccatctctgggaacccagaaggatctagattagtttatct
gttggttgtctggtagagtttctctaatgtttggctgtgggtatctgcat
ctggtttcatcatctgctgtgtggaaactctcagatgacagccatgctag
gatcctgtctgaaagcgtaacagagtatcaaaactagagtcagaaattgg
ttcttgtccatgggatggatataaatttaagataatcattagttggccaa
tcctgctatctctgctccatccttgtccctgtatatcttgtaggcaggac
acattttgggtagaagattttgtggtttggtgccgtaattctttcactga
cagtcatacctggctacaagaggttgctactttcaggctctatattccac
actgataggagtcttagctaaaatcaccccccacagtctccctggggtct
ttcctgtactactgtccatgtgctatattttaatagttttgaaaaaacag
tcaaa
gaattctcctggccctcttgtttttagagtcttttcacataatattctat
gatggagttgtatggatggatatttatatgaattaaatttagttttagat
aaatataaaacagtatgactccctgtggctttttccaaatttctttactg
atatttatcctatgtttttatttccttctttattttcctcctttcccctt
gcctagttaaggacagcaccccattttctgtttcatagcacctgcaatct
agtgtcctcacagaacctactcctaccaccatgttcccttttttctcttc
agttctgtggttacttcagtttgtgtactatcaactgaagatgcgatact
aagagctacaggtaaaatatatcatagaatacttttgtactggggtctct
gttaccttaatgtaatattctccagttctatttatgtcctagttccctga
ttctattttcttctttatggagtaatggtattatattatgtttccatggc
acaattttattctctacatatcatttgtaggaaattatacttgtatcctt
cttatcttttcaaactcacagatttttatattgcatttgattctcgaaca
gtgcatcccaaataaaactgtatctaataatttgtacttcactgggaaaa
aaaactcatataagccaaaatcttctactttctaatatttaattgacaaa
gcaatatatttgcttgctttatattataattattttaatcatacttctaa
tgcctatttagaaacagatgatatgtaagtaggcaagattatatcgcagt
tttactattgatttatatatttactcatggagtacagggagagactcacg
aaattcacaaaatcacataaattaggttatagtaaaaaaaacaaaacact
gctaaaggaaatgagacttggtggtgtggctgcctgcaagttgtatagag
tatgccaaggctgctcctgctgtgactcataaccaatactgaggtaaaga
aactaaatattcatgtacttttattcagtcaatctaattccttactaact
gctgcaactattcccactagcttaattcagatagtgctactcagaagagt
acgaacacctttacccaggaatgagcaagcagattctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112929686_112930355
seq2: B6Ng01-154H23.b_45_714 (reverse)

seq1  TTACGCTTTCAGACAGGATCCTAGCATGGCTGTCATCTGAGAGTTTCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCTTTCAGACAGGATCCTAGCATGGCTGTCATCTGAGAGTTTCCAC  50

seq1  ACAGCAGATGATGAAACCAGATGCAGATACCCACAGCCAAACATTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGATGATGAAACCAGATGCAGATACCCACAGCCAAACATTAGAGA  100

seq1  AACTCTACCAGACAACCAACAGATAAACTAATCTAGATCCTTCTGGGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTACCAGACAACCAACAGATAAACTAATCTAGATCCTTCTGGGTTC  150

seq1  CCAGAGATGGAATCACCAACCAAATATCATACATGGGCTGGACCTAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATGGAATCACCAACCAAATATCATACATGGGCTGGACCTAGGTG  200

seq1  CCCAGCACATATATTGCAGATGTATAACTGGGTCTTCATGCAGATTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACATATATTGCAGATGTATAACTGGGTCTTCATGCAGATTTCCC  250

seq1  AACAATAGAGTCTATTCCTGAATTAGTTGCCTGCATGTGGATCCTTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAGAGTCTATTCCTGAATTAGTTGCCTGCATGTGGATCCTTATAG  300

seq1  GACTGTCTTCTCTTGCCTCAAAGAGAGAGGTTGCAGCTAGTTCTGGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTTCTCTTGCCTCAAAGAGAGAGGTTGCAGCTAGTTCTGGAATG  350

seq1  AGTTGATGTGCCAGGGTGGTGGTGAAACCAGTGGGGACCTCCCCCTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATGTGCCAGGGTGGTGGTGAAACCAGTGGGGACCTCCCCCTTCTC  400

seq1  AAAGGAGAAGGGGAGGGTGAATGAGGGAGAAGCTGTGAGGGGAAAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGAAGGGGAGGGTGAATGAGGGAGAAGCTGTGAGGGGAAAGGAAA  450

seq1  TATAGGCCGGGGGGTGGGGGGCTGATACTGGGATGTAAAGTGAATAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCCGGGGGGTGGGGGGCTGATACTGGGATGTAAAGTGAATAAATG  500

seq1  AGTTAATAAAAACTGCAAAAAAAACCCAAATTTTAACTTGAGTTAAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATAAAAACTGCAAAAAAAACCCAAATTTTAACTTGAGTTAAATTC  550

seq1  AAACGAAATAGCAATCAACTCACTGAGCTCTCAGCCTCAACATATATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAAATAGCAATCAACTCACTGAGCTCTCAGCCTCAACATATATTTT  600

seq1  GCATTAAAATTGATTACCTTTCTCTACACTCATTTTGCTGCTGATATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAAAATTGATTACCTTTCTCTACACTCATTTTGCTGCTGATATGTG  650

seq1  TTTCCCTGTGCCCTGAATTC  670
      ||||||||||||||||||||
seq2  TTTCCCTGTGCCCTGAATTC  670

seq1: chr14_112813051_112814202
seq2: B6Ng01-154H23.g_67_1206

seq1  GAATTCTCCTGGCCCTCTTGTTTTTAGAGTCTTTTCACATAATATTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGCCCTCTTGTTTTTAGAGTCTTTTCACATAATATTCTAT  50

seq1  GATGGAGTTGTATGGATGGATATTTATATGAATTAAATTTAGTTTTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGTTGTATGGATGGATATTTATATGAATTAAATTTAGTTTTAGAT  100

seq1  AAATATAAAACAGTATGACTCCCTGTGGCTTTTTCCAAATTTCTTTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAAACAGTATGACTCCCTGTGGCTTTTTCCAAATTTCTTTACTG  150

seq1  ATATTTATCCTATGTTTTTATTTCCTTCTTTATTTTCCTCCTTTCCCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATCCTATGTTTTTATTTCCTTCTTTATTTTCCTCCTTTCCCCTT  200

seq1  GCCTAGTTAAGGACAGCACCCCATTTTCTGTTTCATAGCACCTGCAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTTAAGGACAGCACCCCATTTTCTGTTTCATAGCACCTGCAATCT  250

seq1  AGTGTCCTCACAGAACCTACTCCTACCACCATGTTCCCTTTTTTCTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCTCACAGAACCTACTCCTACCACCATGTTCCCTTTTTTCTCTTC  300

seq1  AGTTCTGTGGTTACTTCAGTTTGTGTACTATCAACTGAAGATGCGATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTGGTTACTTCAGTTTGTGTACTATCAACTGAAGATGCGATACT  350

seq1  AAGAGCTACAGGTAAAATATATCATAGAATACTTTTGTACTGGGGTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTACAGGTAAAATATATCATAGAATACTTTTGTACTGGGGTCTCT  400

seq1  GTTACCTTAATGTAATATTCTCCAGTTCTATTTATGTCCTAGTTCCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTTAATGTAATATTCTCCAGTTCTATTTATGTCCTAGTTCCCTGA  450

seq1  TTCTATTTTCTTCTTTATGGAGTAATGGTATTATATTATGTTTCCATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTCTTCTTTATGGAGTAATGGTATTATATTATGTTTCCATGGC  500

seq1  ACAATTTTATTCTCTACATATCATTTGTAGGAAATTATACTTGTATCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTATTCTCTACATATCATTTGTAGGAAATTATACTTGTATCCTT  550

seq1  CTTATCTTTTCAAACTCACAGATTTTTATATTGCATTTGATTCTCGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTTTTCAAACTCACAGATTTTTATATTGCATTTGATTCTCGAACA  600

seq1  GTGCATCCCAAATAAAACTGTATCTAATAATTTGTACTTCACTGGGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCCCAAATAAAACTGTATCTAATAATTTGTACTTCACTGGGAAAA  650

seq1  AAAACTCATATAAGCCAAAATCTTCTACTTTCTAATATTTAATTGACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCATATAAGCCAAAATCTTCTACTTTCTAATATTTAATTGACAAA  700

seq1  GCAATATATTTGCTTGCTTTATATTATAATTATTTTAATCATACTTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATATTTGCTTGCTTTATATTATAATTATTTTAATCATACTTCTAA  750

seq1  TGCCTATTTAGAAACAGATGATATGTAAGTAGGCAAGATTATATCGCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATTTAGAAACAGATGATATGTAAGTAGGCAAGATTATATCGCAGT  800

seq1  TTTACTATTGATTTATATATTTACTCATGGAGTACAGGGAGAGACTCACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATTGATTTATATATTTACTCATGGAGTACAGGGAGAGACTCACG  850

seq1  AAATTCACAAAAATCACATAAATTAGGTTATAGTAAAAAAAAACAAAACA  900
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  AAATTCAC-AAAATCACATAAATTAGGTTATAGT-AAAAAAAACAAAACA  898

seq1  CTGCTAAAGGAAATGAGACTTGGTGGTGTGGCTGCCTGCAAGTTGTATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAAGGAAATGAGACTTGGTGGTGTGGCTGCCTGCAAGTTGTATAG  948

seq1  AGTATGCCAAGGCTGCCCCTGCTGTGACTCATAACCAATACTGAGGTAAA  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTATGCCAAGGCTGCTCCTGCTGTGACTCATAACCAATACTGAGGTAAA  998

seq1  GACACTAAATATTCATGTACCTTTATTCAGTCATATCTAATCCCTTACTA  1050
      || ||||||||||||||||| |||||||||||| ||||||| ||||||| 
seq2  GAAACTAAATATTCATGTACTTTTATTCAGTCA-ATCTAATTCCTTACT-  1046

seq1  AACTGCTGCACCTATCCCCACTAGCTTAATTCAGTATAGTGGCTACTCAG  1100
      |||||||||| |||| |||||||||||||||||| ||||| |||||||||
seq2  AACTGCTGCAACTATTCCCACTAGCTTAATTCAG-ATAGT-GCTACTCAG  1094

seq1  GATAGAGTACAGACACACCTTTAACCGCAGGAATGAGGCAAGCAGA-TCT  1149
         ||||||| || |||||||||  | ||||||||| ||||||||| |||
seq2  --AAGAGTAC-GA-ACACCTTTA--CCCAGGAATGA-GCAAGCAGATTCT  1137

seq1  CTG  1152
      |||
seq2  CTG  1140