BAC Information

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BAC

Clone NameB6Ng01-154O05
Chromosome14 (Build37)
Map Location 56,176,694 - 56,176,903
singlet/doubletsinglet
Overlap genenone
Upstream geneJub, 4931414P19Rik, Psmb5, 5830406J20Rik, Cdh24, Acin1, LOC667711, 1700123O20Rik, LOC100042676, Cebpe, Slc7a8, LOC667893, Homez, Ppp1r3e, Bcl2l2, Pabpn1, Slc22a17, Efs, Il25, Cmtm5, Myh6, Myh7, Ngdn, Zfhx2, Thtpa, Ap1g2, Jph4, LOC667938, Dhrs2, LOC100042720, LOC628176, LOC100042729, EG667952, Dhrs4, BC036313, Cpne6, Nrl, Pck2
Downstream geneWdr23, 1110028A07Rik, Psme1, 1500005A01Rik, Psme2, Rnf31, Isgf3g, Rec8L1, Ipo4, Tm9sf1, Tssk4, 1810034K20Rik, Nedd8, Gmpr2, Tinf2, Tgm1, Rabggta, Dhrs1, 2610027L16Rik, Cideb, Ltb4r2, Ltb4r1, Adcy4, Ripk3, Nfatc4, BC030046, Cbln3, 9130227C08Rik, 2310014G06Rik, Cma1, Cma2, LOC100042759, EG545056, Mcpt1, Mcpt9, Mcpt2, Mcpt4, Mcpt8, Ctsg, Gzme, Gzmd, Gzmg, LOC672095, Gzmn, LOC100042770, LOC668072, LOC668074, Gzmf, Gzmc, LOC219102, Gzmb, LOC668082, Atp12a, Rnf17, Cenpj
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154O05.bB6Ng01-154O05.g
ACCDH949812DH949813
length864211
definitionDH949812|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O05, 5' end.DH949813|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccagctcaagtcactaaaagtccagttattctggaaaaggaga
tgttttcaactttagctcctcccaccctttacaagggaaactcaactcca
gcctactctggctttcatgtttacctctaaggagacaagaggaatatatg
agcctaagaaacacttgtgagagtcgcagctctcagcacaaattctaaaa
gacacctacacaagtgtaggacaagagaatgctctcaacccctcccagac
tcctctccaccccctaatcacaagagctcttatagggctggcgaagatga
ccctgcaggcagagccactggctatgaattgatccctcgaacccatgtaa
aggtgggtggaaagaactgacttcacagattggtcctcagacctccatat
gttcatcgtagcatacgtgtacccaataatttttaaaggacaaaacagaa
ctcttggaaagtaacaggaatataagagaaaacctgaacatgttggatgt
tcagaagtttctagaagttgggcgtggtgctagacatccacaacctcaga
actttggagatagaactaggatggaaagttcaaggctatcctcagaacat
agccggttccaggctagcctgaactacatgagactctgtctcaaagagga
gctggggggagatggctcagcagttagcagttaagagtgtttgctgctct
tgcagaggaccagggtttcttttccagcatccacatgactgtagctggtc
tttggctactttgtggattctttttttcttccacccttctccaccccctt
tctacttttcaaccccctaatactagataggagagacaaaaggatggggt
ggtgtggggggaga
cttgctggctagccagtagggccaatcagctagctccaaactaagtgaga
agccctgtctcaaaaaataagttggtaaaagttttttaaagacatgaaag
taggaggaggcttggagggggggatgggggggcagctggagtggctgtgg
tcaagaggcactgaatatatgtatggaattctcaaatagataacttggaa
attttctgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_56176694_56176903
seq2: B6Ng01-154O05.g_71_281

seq1  CTTGCTGGCTAGCCAGTAGGGCCAATCAGCTAGCTCCAAACTAAGTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGCTAGCCAGTAGGGCCAATCAGCTAGCTCCAAACTAAGTGAGA  50

seq1  AGCCCTGTCTCAAAAAATAAGTTGGTAAAAGTTTTTTAAAGACATGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGTCTCAAAAAATAAGTTGGTAAAAGTTTTTTAAAGACATGAAAG  100

seq1  TAGGAGGAGGCTTGGAGGGGGGGATGGGGGGGCAGCTGGAGTGGCTGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGAGGCTTGGAGGGGGGGATGGGGGGGCAGCTGGAGTGGCTGTGG  150

seq1  TCAAGAGGCACTGTATATATGTATGGAATTCTCAAATAAATAACTTGGAA  200
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  TCAAGAGGCACTGAATATATGTATGGAATTCTCAAATAGATAACTTGGAA  200

seq1  ATTTT-TGAGG  210
      ||||| |||||
seq2  ATTTTCTGAGG  211