BAC Information

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BAC

Clone NameB6Ng01-155G06
Chromosome14 (Build37)
Map Location 23,407,605 - 23,407,973
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075, EG435392
Downstream geneLOC665068, Kcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155G06.bB6Ng01-155G06.g
ACCDH950187DH950188
length384277
definitionDH950187|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G06, 5' end.DH950188|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcaatctctctctctctctctctctctctctctctctctctctctctctc
tctctctctctctctctctctctctagcccctctaacacacactctctct
cccacccacacacccacccactcactgacacgcgcgctctccctctctct
ctcactatctctaaagcaatcaaaaaaagtgccacactgtcaagggaaaa
caaaaaagcgtggggagagggagccacagctctcactcacacacaaataa
taacaaaaatataagactgtgagccgacacaaatatgtctatgtatgtgt
ctggtgtagaatttacacaaaactggggctgggctagggggcagggtaga
gagagaaaaagagaaagagagagagaaagagaga

cagcatggttagggaagaggactgtcaaggtcctacccacccttagctga
ggagctattaatagttggtggctgtgcagggatggagagtccctgttttt
atggagttcctaatagattgcccataccttagtatataggcctgcatcca
agcacatatgggcagtactgattggaatccataagctataaaaaataggg
acctaaagataggtggcagggtggggtagggggcggggaacacagggtag
ggaggtctcgggagagttgggggagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23407605_23407973
seq2: B6Ng01-155G06.b_75_434 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTTTCTTAAAGATTTATTTACTTATTTATTTT-  49
      ||||||| ||||||||||||||       | | |||   | | ||   | 
seq2  TCTCTCTTTCTCTCTCTCTTTC-------TCTTTTTCTCTCTCTACCCTG  43

seq1  -----TA--------TGAGTATACTGTAACTGTCTTCAGACACACCAGAA  86
           ||          ||| |  ||||| | |||      |||||||| 
seq2  CCCCCTAGCCCAGCCCCAGTTTTGTGTAAAT-TCT------ACACCAGA-  85

seq1  GAGGGCATCAGATCCCATTACAGATGATTGTGAGCCAAC------ATGTT  130
              || || |    ||| ||   |||  ||  ||      || ||
seq2  --------CACATACATAGACATATTTGTGTCGGCTCACAGTCTTATATT  127

seq1  GTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTA  180
       ||| |   | |||           | ||       ||| || ||| |  
seq2  TTTGTTATTATTTG-----------TGTG-----TGAGTGAGAGCTGT--  159

seq1  AACGCTGAGTCATCTCTCCACCCCCTTCCTATTTTTTTTTTTTTCT----  226
         |||    | |||| |||| |        |||||| ||||  ||    
seq2  --GGCT---CCCTCTCCCCACGC--------TTTTTTGTTTTCCCTTGAC  196

seq1  --TCTGGCAGTTTTTTTTTTTTTTTAAGAGA----GAGAGAGAGACTAAG  270
        | ||||| |||||||  ||  || |||||    ||||||||||   ||
seq2  AGTGTGGCACTTTTTTTGATTGCTTTAGAGATAGTGAGAGAGAGAGGGAG  246

seq1  AG----------ATAGACTGATTTGCTGATAGGCAGAGAAAG-GAGAAAG  309
      ||          |  || ||  | | ||   ||  | || || |||   |
seq2  AGCGCGCGTGTCAGTGAGTGGGTGGGTGTGTGGGTGGGAGAGAGAGTGTG  296

seq1  -GAGAGAGAG---AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  355
       |  |||| |   |||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAGGGGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  346

seq1  GAGAGAGAGAGAGA  369
      ||||||||||||||
seq2  GAGAGAGAGAGAGA  360


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