BAC Information

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BAC

Clone NameB6Ng01-155G12
Chromosome14 (Build37)
Map Location 82,371,231 - 82,506,665
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155G12.bB6Ng01-155G12.g
ACCDH950197DH950198
length1,1001,158
definitionDH950197|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G12, 5' end.DH950198|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,371,231 - 82,372,382)(82,505,480 - 82,506,665)
sequence
gaattctgttctgcattttaaacaaatcactgctaatttaggatatctga
cagaaaagcaagctgtgattggaaattttaatcatgtccatatatcaatt
tatcatatcagcgaatataataatcactgattcgctgtttagtgttatca
tataaatattcatgtgattagtaattttaaacatcagtggcaataatgct
aagtaacaatgtaatataaaatgagttgtgatgccagcatttcctaatat
gaatcagactagaggctgctaaggattttagaacagatatcaattgaatt
tggaaaacatatttaggcttataaatcctctctatgaatcttttattttt
cctgttgtattatgtttcgagccatttcctctaccaaattcatgtgcttt
tctggcacattgttttaatatggtttattttgactttttaatgagaattt
tatacatgtatatcatgataaaagtcacaccatattcctccctatacaat
tccactcatatgctccaacattttcccttaccaactttctgtgctctttt
ataaaggagagcacctactcatgcctagttgtgcttattgaagactatag
actccagaatggggagcatttcaggggctacacctaaaacacaaataagt
tttcctcccctgatctcttctacttagaatccaaattcttattctacttg
tcatactattaatatacctttccattcccaatagcaaaaaatatctatct
gtttgtaattcagaggcctactttattaaattcatttcatgtagcaaaaa
tacctcgaaaacttggtttcttaaaaatgtttcctgattaataacaggaa
taatgttatcgcttctagctaactcttatgttctcagcaaatttaaatta
gccacactgagtgctggctcatggagacttcaaatctttcactaattttc
acagatacaaaaattgaaactgacagaccattatgcaaacaagccctgct
gctctcttgatctattcatactcatgtatgctgagaaggagtaagctaca
atcatattaagaattagaatgtcagtacgattttttttttttagggtttc

gaattctgtttccttgcttgaatataaaagtgaagtattgctttaaatcc
taatctcaacctgtaatatattgattgtctgatagtgtccaggctggtgg
atatgagataatatttctgaggatattgattttcatttctccaatgacta
taaaatttgagcaacatttttttatatctggttttcttttttctatgcct
cttttgaagaaatagagtcaggtcactcacaacttgcatgacatatacct
tctttcttatacatgtgtcttcagtctcaggatctgaggtcacaaatatc
agcatctttagtttttgaatgtcactaaatggcattcccctcattctcac
tccattgatcttgagagtttcttggacaaattcttctatattgtttttga
ttcatttttatggattttgaatacccgatcctttgtaacttcaggcagac
ttttctttctctttttgcattttttatttcactcttgtttttatttaagt
attttaaagtgtagaaacatatgatgggaagtttcaataacctagaaaat
tgtagcactggtagtcattacacatataaaatattgaatcaagaacaaag
tctcacaaaaaaatgaacagaaataaaactgaaaagtatgaataaatctg
atactaaaatataattgtcaaatgcaaatcacaaagacagaagagatatc
aagttggatactttcccacaattttcctaatttttccagcatgcacatat
ttcagtaagatgtttatcattacatttgtgctgtgactagtactagacta
ttaaagcaaaaattcatagaggtgcatattttaccctaacaaattcttta
atgcttttaattagatttctttttgagaatttcttttttttcttgtttgt
tattttttaatggaaagcaaatttttctttctacagtataccccaaccag
tttcttctccttcactcttctgagacatcccaacttttctctctacagat
acattgctcttcattttcttcagaaagagctcgactcagaaattacatca
acatgacaaagttgatacaatatatcagcaaagctccatatagagcttac
aagacaacaaatgagaaaggatctgaggaacaggcaggatcatgaaacag
ttgccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82371231_82372382
seq2: B6Ng01-155G12.b_47_1146

seq1  GAATTCTGTTCTGCATTTTAAACAAATCACTGCTAATTTAGGATATCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTGCATTTTAAACAAATCACTGCTAATTTAGGATATCTGA  50

seq1  CAGAAAAGCAAGCTGTGATTGGAAATTTTAATCATGTCCATATATCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGCAAGCTGTGATTGGAAATTTTAATCATGTCCATATATCAATT  100

seq1  TATCATATCAGCGAATATAATAATCACTGATTCGCTGTTTAGTGTTATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATCAGCGAATATAATAATCACTGATTCGCTGTTTAGTGTTATCA  150

seq1  TATAAATATTCATGTGATTAGTAATTTTAAACATCAGTGGCAATAATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATATTCATGTGATTAGTAATTTTAAACATCAGTGGCAATAATGCT  200

seq1  AAGTAACAATGTAATATAAAATGAGTTGTGATGCCAGCATTTCCTAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACAATGTAATATAAAATGAGTTGTGATGCCAGCATTTCCTAATAT  250

seq1  GAATCAGACTAGAGGCTGCTAAGGATTTTAGAACAGATATCAATTGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGACTAGAGGCTGCTAAGGATTTTAGAACAGATATCAATTGAATT  300

seq1  TGGAAAACATATTTAGGCTTATAAATCCTCTCTATGAATCTTTTATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACATATTTAGGCTTATAAATCCTCTCTATGAATCTTTTATTTTT  350

seq1  CCTGTTGTATTATGTTTCGAGCCATTTCCTCTACCAAATTCATGTGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGTATTATGTTTCGAGCCATTTCCTCTACCAAATTCATGTGCTTT  400

seq1  TCTGGCACATTGTTTTAATATGGTTTATTTTGACTTTTTAATGAGAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCACATTGTTTTAATATGGTTTATTTTGACTTTTTAATGAGAATTT  450

seq1  TATACATGTATATCATGATAAAAGTCACACCATATTCCTCCCTATACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATGTATATCATGATAAAAGTCACACCATATTCCTCCCTATACAAT  500

seq1  TCCACTCATATGCTCCAACATTTTCCCTTACCAACTTTCTGTGCTCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCATATGCTCCAACATTTTCCCTTACCAACTTTCTGTGCTCTTTT  550

seq1  ATAAAGGAGAGCACCTACTCATGCCTAGTTGTGCTTATTGAAGACTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGAGAGCACCTACTCATGCCTAGTTGTGCTTATTGAAGACTATAG  600

seq1  ACTCCAGAATGGGGAGCATTTCAGGGGCTACACCTAAAACACAAATAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGAATGGGGAGCATTTCAGGGGCTACACCTAAAACACAAATAAGT  650

seq1  TTTCCTCCCCTGATCTCTTCTACTTAGAATCCAAATTCTTATTCTACTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCCCTGATCTCTTCTACTTAGAATCCAAATTCTTATTCTACTTG  700

seq1  TCATACTATTAATATACCTTTCCATTCCCAATAGCAAAAAATATCTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTATTAATATACCTTTCCATTCCCAATAGCAAAAAATATCTATCT  750

seq1  GTTTGTAATTCAGAGGCCTACTTTATTAAATTCATTTCATGTAGCAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAATTCAGAGGCCTACTTTATTAAATTCATTTCATGTAGCAAAAA  800

seq1  TACCTCGAAAACTTGGTTTCTTAAAAATGTTTCCTGATTAATAACAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCGAAAACTTGGTTTCTTAAAAATGTTTCCTGATTAATAACAGGAA  850

seq1  TAATGTTATCGCTTCTAGCTAACTCTTATGTTCTCAGGCAAATTTAAATT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAATGTTATCGCTTCTAGCTAACTCTTATGTTCTCA-GCAAATTTAAATT  899

seq1  AGCCACACTGAGTGCTGGCTCATGGAGACTTCAAATCTTTCACTAATTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACACTGAGTGCTGGCTCATGGAGACTTCAAATCTTTCACTAATTTT  949

seq1  CACAGATAACAAAAATTGAAACTGACCAAGACCAATTATGCAAACAAAAG  1000
      ||||||| ||||||||||||||||||  ||||| |||||||||||  |||
seq2  CACAGAT-ACAAAAATTGAAACTGAC--AGACC-ATTATGCAAAC--AAG  993

seq1  CCCTTGCTTGCTCCTTCTTGGATCTATTCATACTCAATGTATGCCTGAGA  1050
      ||| ||| |||||  |||| ||||||||||||||| ||||||| ||||| 
seq2  CCC-TGC-TGCTC--TCTT-GATCTATTCATACTC-ATGTATG-CTGAG-  1035

seq1  AAGGAGTAAAGCTTAACATATCATATTAAAGAAATTAGAAATTGTCAGGT  1100
      ||||||| |||||  ||| ||||||||||   ||||||||  ||||| ||
seq2  AAGGAGT-AAGCT--ACA-ATCATATTAA--GAATTAGAA--TGTCA-GT  1076

seq1  ACCAGATTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTT  1150
      ||  ||||||||||||||                          ||||||
seq2  AC--GATTTTTTTTTTTT--------------------------AGGGTT  1098

seq1  TC  1152
      ||
seq2  TC  1100

seq1: chr14_82505480_82506665
seq2: B6Ng01-155G12.g_68_1225 (reverse)

seq1  TGTGGCAACTGTGTCTATGACTCCTTTGCCTGCTCCTCAGACTCCTTTCC  50
      |||||||||||| || |||| |||  |||||| |||||||| |||||| |
seq2  TGTGGCAACTGTTTC-ATGA-TCC--TGCCTGTTCCTCAGA-TCCTTT-C  44

seq1  TCCTATTTGTTTGTCTTGTTAAAGCTCTATATGTGAGCTTTTGCCTTGTA  100
      ||  ||||| |||||||||  |||||||||||| |||| |||||  ||  
seq2  TC--ATTTG-TTGTCTTGT--AAGCTCTATATG-GAGC-TTTGC--TGAT  85

seq1  TTATTGTATCAACTTTTGTCATGTTTGGTTGTTATCTCTTGGAGTCGAGC  150
       |||||||||||| |||||||||||  | ||| || |||  |||||||||
seq2  ATATTGTATCAAC-TTTGTCATGTT--GATGTAATTTCT--GAGTCGAGC  130

seq1  TCTTTTCTGAAAGAAAATGGAGAGGCAATGTATCTGGTAGAGAGGAGAGG  200
      || |||||| ||||||||| ||| ||||||||||| ||||||| || | |
seq2  TC-TTTCTG-AAGAAAATGAAGA-GCAATGTATCT-GTAGAGA-GAAAAG  175

seq1  TTGGGATGTTCTCAGAAGAGTGGAGGGAGAAGAAACTGGTTGGGGTATAC  250
      |||||||| |||||||||||| || |||||||||||||||||||||||||
seq2  TTGGGATG-TCTCAGAAGAGT-GAAGGAGAAGAAACTGGTTGGGGTATAC  223

seq1  TGTAGGAAAGAAAAATTTGCTTTCCATTAAAAAATAACAAACAAGAAAAA  300
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTA-GAAAGAAAAATTTGCTTTCCATTAAAAAATAACAAACAAGAAAAA  272

seq1  AAAGAAATTCTCAAAAAGAAATCTAATTAAAAGCATTAAAGAATTTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATTCTCAAAAAGAAATCTAATTAAAAGCATTAAAGAATTTGTTA  322

seq1  GGGTAAAATATGCACCTCTATGAATTTTTGCTTTAATAGTCTAGTACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAATATGCACCTCTATGAATTTTTGCTTTAATAGTCTAGTACTAG  372

seq1  TCACAGCACAAATGTAATGATAAACATCTTACTGAAATATGTGCATGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCACAAATGTAATGATAAACATCTTACTGAAATATGTGCATGCTG  422

seq1  GAAAAATTAGGAAAATTGTGGGAAAGTATCCAACTTGATATCTCTTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTAGGAAAATTGTGGGAAAGTATCCAACTTGATATCTCTTCTGT  472

seq1  CTTTGTGATTTGCATTTGACAATTATATTTTAGTATCAGATTTATTCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGATTTGCATTTGACAATTATATTTTAGTATCAGATTTATTCATA  522

seq1  CTTTTCAGTTTTATTTCTGTTCATTTTTTTGTGAGACTTTGTTCTTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGTTTTATTTCTGTTCATTTTTTTGTGAGACTTTGTTCTTGATT  572

seq1  CAATATTTTATATGTGTAATGACTACCAGTGCTACAATTTTCTAGGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTTATATGTGTAATGACTACCAGTGCTACAATTTTCTAGGTTAT  622

seq1  TGAAACTTCCCATCATATGTTTCTACACTTTAAAATACTTAAATAAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTCCCATCATATGTTTCTACACTTTAAAATACTTAAATAAAAAC  672

seq1  AAGAGTGAAATAAAAAATGCAAAAAGAGAAAGAAAAGTCTGCCTGAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGAAATAAAAAATGCAAAAAGAGAAAGAAAAGTCTGCCTGAAGTT  722

seq1  ACAAAGGATCGGGTATTCAAAATCCATAAAAATGAATCAAAAACAATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGATCGGGTATTCAAAATCCATAAAAATGAATCAAAAACAATATA  772

seq1  GAAGAATTTGTCCAAGAAACTCTCAAGATCAATGGAGTGAGAATGAGGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTGTCCAAGAAACTCTCAAGATCAATGGAGTGAGAATGAGGGG  822

seq1  AATGCCATTTAGTGACATTCAAAAACTAAAGATGCTGATATTTGTGACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCATTTAGTGACATTCAAAAACTAAAGATGCTGATATTTGTGACCT  872

seq1  CAGATCCTGAGACTGAAGACACATGTATAAGAAAGAAGGTATATGTCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCTGAGACTGAAGACACATGTATAAGAAAGAAGGTATATGTCATG  922

seq1  CAAGTTGTGAGTGACCTGACTCTATTTCTTCAAAAGAGGCATAGAAAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGTGAGTGACCTGACTCTATTTCTTCAAAAGAGGCATAGAAAAAA  972

seq1  GAAAACCAGATATAAAAAAATGTTGCTCAAATTTTATAGTCATTGGAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCAGATATAAAAAAATGTTGCTCAAATTTTATAGTCATTGGAGAA  1022

seq1  ATGAAAATCAATATCCTCAGAAATATTATCTCATATCCACCAGCCTGGAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATCAATATCCTCAGAAATATTATCTCATATCCACCAGCCTGGAC  1072

seq1  ACTATCAGACAATCAATATATTACAGGTTGAGATTAGGATTTAAAGCAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCAGACAATCAATATATTACAGGTTGAGATTAGGATTTAAAGCAAT  1122

seq1  ACTTCACTTTTATATTCAAGCAAGGAAACAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTTTTATATTCAAGCAAGGAAACAGAATTC  1158