BAC Information

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BAC

Clone NameB6Ng01-155M10
Chromosome14 (Build37)
Map Location 55,176,574 - 55,386,593
singlet/doubletdoublet
Overlap geneJub, 4931414P19Rik, Psmb5, 5830406J20Rik, Cdh24, Acin1, LOC667711, 1700123O20Rik, LOC100042676, Cebpe, Slc7a8
Upstream geneEG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049, LOC100043325, A730076H11Rik, LOC627777, A630038E17Rik, EG626545, Dad1, Abhd4, Olfr49, EG666623, LOC667819, LOC100042642, 5330426L24Rik, Oxa1l, Slc7a7, Mrpl52, Mmp14, Lrp10, Rem2, Prmt5, D14Ertd500e
Downstream geneLOC667893, Homez, Ppp1r3e, Bcl2l2, Pabpn1, Slc22a17, Efs, Il25, Cmtm5, Myh6, Myh7, Ngdn, Zfhx2, Thtpa, Ap1g2, Jph4, LOC667938, Dhrs2, LOC100042720, LOC628176, LOC100042729, EG667952, Dhrs4, BC036313, Cpne6, Nrl, Pck2, Wdr23, 1110028A07Rik, Psme1, 1500005A01Rik, Psme2, Rnf31, Isgf3g, Rec8L1, Ipo4, Tm9sf1, Tssk4, 1810034K20Rik, Nedd8, Gmpr2, Tinf2, Tgm1, Rabggta, Dhrs1, 2610027L16Rik, Cideb, Ltb4r2, Ltb4r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155M10.bB6Ng01-155M10.g
ACCDH950466DH950467
length1,125284
definitionDH950466|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M10, 5' end.DH950467|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,385,452 - 55,386,593)(55,176,574 - 55,176,857)
sequence
gaattcccctgacgttaatagctgtgacgttaatgtactattactttgct
gtccaaatcataataacccaccatgggggcaggcaaagtgagtcactagg
ccaaagggttacttagtcactatacaaaccaaccaatgacaccaatgaga
accctgttgctcaaatctgccccttacaaaggtatagaaagtgtgttctt
tctttgttcttggtctcttctctggcctgtgtgctgagaggagagtcccc
aacatgttggatcaataaaaatcctcatgcgttttgcagcgatggcagcg
gtctctgtggtccttgtgataagggtcttttgacgaactacaacatttgg
tgcttggctgggaagaccctcttcagtgggacacagaaaccgtacatcgg
aggcaaagtggaatccctccctgcctgtctgtatgtctgtgtgtctgtct
gtcttgttcacttgtgtgtcctccattagaccaccttctgattctgtttt
gcttttggtttgtctggtttcaggtctggttttggtcccaaagggttgac
tgattatcttggtttggttttaggccggtctcaggttctgggggccttcc
catggagagagatccatttgggttggtcgcagtgacagtgagacgtgcca
aaatgttgcaggccacaacactggaggatgctccggtgtcaagctgggaa
gttggatctgaaacagtccttctcaacccagcagcagctagggttcagta
tatgcctggaacagatagtgtcaggcttctctggaaatcgcgtgtaagac
gccctgtattggtcttgcttgtgtttgtcatttctgtggtactgtgattc
tatggtggttgcctgaaaatggtttctgtgtgtgtcttgtgtgtctcttt
gtgtttggacttggactatcaactggcgactgtttttgagttatgccctc
tggaataaaccttagaatcctgtcagtcactatgctgaccacttcctttc
aggtctcagctgctctgctccacttcactccagggagcagcagcagtcac
atgttccgcctatggactaaaactatggagatgagcttagaatcctaaac
aaaaaggggtggtccctgaaagtca
actatccaagtaaataatcacatttgaaaataaaaatataaaactagtga
acacaggggtgcataccttaatcctatcactggagacacagaagcagggg
gaatctctgtgagttcaagtttactgtaatgagttccaggacagccaggg
atacatagagagaccctgttgataaatagttaggactggaaagatggctc
aacagttaagaacacttgatacccttcagaggacctaagtttggttcttc
cttctttcttccttccttccttccttccttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_55385452_55386593
seq2: B6Ng01-155M10.b_50_1174 (reverse)

seq1  TGACTTCTCAGGGACCACCCCTCTTTTGCTCTGGGTTTCCTGAGCTCATT  50
      |||||| ||||||||||||||| ||||| |  || ||  || ||||||| 
seq2  TGACTT-TCAGGGACCACCCCT-TTTTGTTTAGGATT--CTAAGCTCAT-  45

seq1  CCTCCCTAGGTTCTAGGTCCATGGGCGGGACCACTGTGACCTGCTGGCTG  100
       |||| || ||| || |||||| ||||| ||   ||||| ||||| ||||
seq2  -CTCCATA-GTTTTA-GTCCATAGGCGGAAC--ATGTGA-CTGCT-GCTG  88

seq1  CTCCCTGGAGTTGGAGTGGGAGGCAGAGCAGCTGAGGACCTGAAAGGAAG  150
      |||||||||| || |||||   ||||||||||||| ||||||||||||||
seq2  CTCCCTGGAG-TGAAGTGG--AGCAGAGCAGCTGA-GACCTGAAAGGAAG  134

seq1  TGGTCAGCATAGTGACCTGACAGGATTCTTAGGTTTATTCCAGAGGGCAT  200
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  TGGTCAGCATAGTGA-CTGACAGGATTCTAAGGTTTATTCCAGAGGGCAT  183

seq1  AACTCAAAAACAGTCGCCAGTTGTTAGTCCAAGTCCAAACACAAAGAGAC  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACTCAAAAACAGTCGCCAGTTGATAGTCCAAGTCCAAACACAAAGAGAC  233

seq1  ACACAAGACACACACAGAAACCATTTTCAGGCAACCACCATAGAATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGACACACACAGAAACCATTTTCAGGCAACCACCATAGAATCACA  283

seq1  GTACCACAGAAATGACAAACACAAGCAAGACCAATACAGGGCGTCTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCACAGAAATGACAAACACAAGCAAGACCAATACAGGGCGTCTTACA  333

seq1  CGCGATTTCCAGAGAAGCCTGACACTATCTGTTCCAGGCATATACTGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGATTTCCAGAGAAGCCTGACACTATCTGTTCCAGGCATATACTGAAC  383

seq1  CCTAGCTGCTGCTGGGTTGAGAAGGACTGTTTCAGATCCAACTTCCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGCTGCTGGGTTGAGAAGGACTGTTTCAGATCCAACTTCCCAGC  433

seq1  TTGACACCGGAGCATCCTCCAGTGTTGTGGCCTGCAACATTTTGGCACGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACCGGAGCATCCTCCAGTGTTGTGGCCTGCAACATTTTGGCACGT  483

seq1  CTCACTGTCACTGCGACCAACCCAAATGGATCTCTCTCCATGGGAAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTCACTGCGACCAACCCAAATGGATCTCTCTCCATGGGAAGGCC  533

seq1  CCCAGAACCTGAGACCGGCCTAAAACCAAACCAAGATAATCAGTCAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAACCTGAGACCGGCCTAAAACCAAACCAAGATAATCAGTCAACCC  583

seq1  TTTGGGACCAAAACCAGACCTGAAACCAGACAAACCAAAAGCAAAACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGACCAAAACCAGACCTGAAACCAGACAAACCAAAAGCAAAACAGA  633

seq1  ATCAGAAGGTGGTCTAATGGAGGACACACAAGTGAACAAGACAGACAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGGTGGTCTAATGGAGGACACACAAGTGAACAAGACAGACAGAC  683

seq1  ACACAGACATACAGACAGGCAGGGAGGGATTCCACTTTGCCTCCGATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACATACAGACAGGCAGGGAGGGATTCCACTTTGCCTCCGATGTA  733

seq1  CGGTTTCTGTGTCCCACTGAAGAGGGTCTTCCCAGCCAAGCACCAAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTCTGTGTCCCACTGAAGAGGGTCTTCCCAGCCAAGCACCAAATGT  783

seq1  TGTAGTTCGTCAAAAGACCCTTATCACAAGGACCACAGAGACCGCTGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCGTCAAAAGACCCTTATCACAAGGACCACAGAGACCGCTGCCA  833

seq1  TCGCTGCAAAACGCATGAGGATTTTTATTGATCCAACATGTTGGGGACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGCAAAACGCATGAGGATTTTTATTGATCCAACATGTTGGGGACTC  883

seq1  TCCTCTCAGCACACAGGCCAGAGAAGAGACCAAGAACAAAGAAAGAACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCAGCACACAGGCCAGAGAAGAGACCAAGAACAAAGAAAGAACAC  933

seq1  ACTTTCTATACCTTTGTAAGGGGCAGATTTGAGCAACAGGGTTCTCATTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTATACCTTTGTAAGGGGCAGATTTGAGCAACAGGGTTCTCATTG  983

seq1  GTGTCATTGGTTGGTTTGTATAGTGACTAAGTAACCCTTTGGCCTAGTGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATTGGTTGGTTTGTATAGTGACTAAGTAACCCTTTGGCCTAGTGA  1033

seq1  CTCACTTTGCCTGCCCCCATGGTGGGTTATTATGATTTGGACAGCAAAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTGCCTGCCCCCATGGTGGGTTATTATGATTTGGACAGCAAAGT  1083

seq1  AATAGTACATTAACGTCACAGCTATTAACGTCAGGGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTACATTAACGTCACAGCTATTAACGTCAGGGGAATTC  1125

seq1: chr14_55176574_55176857
seq2: B6Ng01-155M10.g_72_355

seq1  ACTATCCAAGTAAATAATCACATTTGAAAATAAAAATATAAAACTAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCCAAGTAAATAATCACATTTGAAAATAAAAATATAAAACTAGTGA  50

seq1  ACACAGGGGTGCATACCTTAATCCTATCACTGGAGACACAGAAGCAGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGGTGCATACCTTAATCCTATCACTGGAGACACAGAAGCAGGGG  100

seq1  GAATCTCTGTGAGTTCAAGTTTACTGTAATGAGTTCCAGGACAGCCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCTGTGAGTTCAAGTTTACTGTAATGAGTTCCAGGACAGCCAGGG  150

seq1  ATACATAGAGAGACCCTGTTGATAAATAGTTAGGACTGGAAAGATGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGAGAGACCCTGTTGATAAATAGTTAGGACTGGAAAGATGGCTC  200

seq1  AACAGTTAAGAACACTTGATACCCTTCAGAGGACCTAAGTTTGGTTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAAGAACACTTGATACCCTTCAGAGGACCTAAGTTTGGTTCTTC  250

seq1  CTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTT  284
      ||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTT  284