BAC Information

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BAC

Clone NameB6Ng01-157C17
Chromosome14 (Build37)
Map Location 113,368,769 - 113,369,880
singlet/doubletsinglet
Overlap genenone
Upstream geneEG223186, LOC100043509
Downstream geneTpm3-rs7, LOC100043510, LOC382947
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157C17.bB6Ng01-157C17.g
ACCDH951480DH951481
length1,0951,216
definitionDH951480|Mus musculus domesticus DNA, BAC clone: B6Ng01-157C17, 5' end.DH951481|Mus musculus domesticus DNA, BAC clone: B6Ng01-157C17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaatttaggaggaagtgcactgtctgataaggattcactttt
tgggtttgtatatcgcacctacccaacacattctctggtaaataaaggca
tacaagatcccccccctccccagttatattttccttaagagactaattac
aaggaggaatgctccaaattcaaagacttcacctgagtgtctccttcttt
gggcttgagtttcaacaaacaaatttagagaacagggcagctgaatcctt
cagagaacattagaaaatgtaaggctgcataattgcactgtgtttctaag
aacagttcagcaagagtgccacttcaaatcagaattgtccgcagaaatat
ataggttttttttttcagataatagaaacaatcaagtgcacttcacattt
ctgaaatatctcatttcaattttgaagtgaattttgccttggttttccaa
acatatttacccaagaaagatggtttacatggagaactgctaatgatcct
aaatgcttaatacatttatcaatgaaccacttacctttctacatttttat
agatgtaggaaataaatgttaatttccctgttgtggtaccattagatttt
acatttcaagtgacaatcattatgtcagtattatcttcagccagttaact
gccaaagctttaagtttcacatgggcatgtgaacaggttgaggaaacaaa
tgcaacagagtggaaagaactgcaaggaatggacctcattttagaaaaca
ctaattttattttagtgattggaaactaaatgaaattcccaaagaactta
ttattaaacaaactatccattgacccataagaacatattttcttcaactt
caacatccatctggtataaaaatcttaataataatttgattcagattaaa
tgactacctaagcttcagttctcaagagatttgggaaatgaataatttga
atagatcagtactcagagaagacagtgttacaggtgctctcattaaggtg
agtgaacataattcaaatactctttgctgtagcacgaatttattcctatc
acaaataatatacattggtcatcattacaaatgggatactaccct
gaattctcagcatagcaatcactaatgactaagaagtgctccattaaaat
gttcactgtccttagttatcaggaaaatgtaaatcaaaactcttctgata
tttctctttacatccctcaggaggtccaagaacaaaaactcaagcaacag
ggcatactggcaagaacaaggggattgcacctctatttctgttcagaata
taaacttacacaactactttagaaatcaatttggccatttctcagaaaat
tgtggatagtattacctcaagacccagttataactctcccgggcatgtac
ctagaagatgttctactattctacaagaacacttgctcatctgtgttcac
agcaactttattgttaagactcagaaacttgaaacatccttgatgttcct
gaactgaaagaatgggttaaaaaaaaagaaaagaaaatatggtacatttc
cacaatggaatattactcatctgtaaaaacaatggccacatgtaatttga
aggcaattggagagaacaacaaaagagcatcatgagtgagataacaaaga
cccagaaagacaaacgtggtatgtatttacttgtaagtctatattagcca
taaagtacagaataaccatgttataatccacagacccaaaggagctaact
aacagaaaaaggctgaaagatgatatcatgaatctcactgagagggcaca
gtagaatagtcattgagggcagatggagggacaagactgggttgtggagg
gtgtggaagaataataacagaagggatgggatagggcacagacagagaga
aagattagagggagactaaactagaattggttggggctgcatctctgaga
caagcaagaaacctaaaacaatggaaattacaggtatctatgggcgggtg
tgctgtctcatgcctttactctagcacttggggaggcagaggcaggtggt
tttctgagttcaggcgagcctggtctacaagtggagttccaggacagcag
ggctgtaaggagaaccctgtttcaacgagcaactaacaaacaaactatct
accaatcaaccaacaactacacaattcaggtatcttgagggtacctggct
aaactctactatggcactcatgaacttaagcggcattctatgacggaaac
tgctcaagactgggaacggaccagtcaaccttggtcccacattgttcttg
gtcgctggaaatgtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113368769_113369880
seq2: B6Ng01-157C17.b_46_1140 (reverse)

seq1  AGGGTAGTTATCCCATTTTGTAATGATGTGACCAATGTATAATTAATTTG  50
      ||||||| ||||||| ||||||||||  |||||||||||||  | |||||
seq2  AGGGTAG-TATCCCA-TTTGTAATGA--TGACCAATGTATA--TTATTTG  44

seq1  TTGAATAAGAAATAAAATTCTGTGCTACAGCAAAGAGCTATTTGAA-TAT  99
      |   ||| |||   |||||| |||||||||||||||| |||||||| |||
seq2  T--GATAGGAA--TAAATTC-GTGCTACAGCAAAGAG-TATTTGAATTAT  88

seq1  GTTCACTCACCCTTAATGAGAGCAACCTTGTAACACTGTCTTTTCTCTGG  149
      ||||||||| ||||||||||||||  | ||||||||||||  ||||||| 
seq2  GTTCACTCA-CCTTAATGAGAGCA--CCTGTAACACTGTC--TTCTCTGA  133

seq1  GTACTGATCTATTCAAATTATTCATTTTCCCAAATCTCTTGAGAACTGAA  199
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTACTGATCTATTCAAATTATTCA-TTTCCCAAATCTCTTGAGAACTGAA  182

seq1  GCTTAGGTAGTCATTTAATCTGAATCAAATTATTATTAAGATTTTTATAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGTAGTCATTTAATCTGAATCAAATTATTATTAAGATTTTTATAC  232

seq1  CAGATGGATGTTGAAGTTGAAGAAAATATGTTCTTATGGGTCAATGGATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGATGTTGAAGTTGAAGAAAATATGTTCTTATGGGTCAATGGATA  282

seq1  GTTTGTTTAATAATAAGTTCTTTGGGAATTTCATTTAGTTTCCAATCACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTAATAATAAGTTCTTTGGGAATTTCATTTAGTTTCCAATCACT  332

seq1  AAAATAAAATTAGTGTTTTCTAAAATGAGGTCCATTCCTTGCAGTTCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATTAGTGTTTTCTAAAATGAGGTCCATTCCTTGCAGTTCTTT  382

seq1  CCACTCTGTTGCATTTGTTTCCTCAACCTGTTCACATGCCCATGTGAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTGTTGCATTTGTTTCCTCAACCTGTTCACATGCCCATGTGAAAC  432

seq1  TTAAAGCTTTGGCAGTTAACTGGCTGAAGATAATACTGACATAATGATTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCTTTGGCAGTTAACTGGCTGAAGATAATACTGACATAATGATTG  482

seq1  TCACTTGAAATGTAAAATCTAATGGTACCACAACAGGGAAATTAACATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGAAATGTAAAATCTAATGGTACCACAACAGGGAAATTAACATTT  532

seq1  ATTTCCTACATCTATAAAAATGTAGAAAGGTAAGTGGTTCATTGATAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTACATCTATAAAAATGTAGAAAGGTAAGTGGTTCATTGATAAAT  582

seq1  GTATTAAGCATTTAGGATCATTAGCAGTTCTCCATGTAAACCATCTTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAAGCATTTAGGATCATTAGCAGTTCTCCATGTAAACCATCTTTCT  632

seq1  TGGGTAAATATGTTTGGAAAACCAAGGCAAAATTCACTTCAAAATTGAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAATATGTTTGGAAAACCAAGGCAAAATTCACTTCAAAATTGAAA  682

seq1  TGAGATATTTCAGAAATGTGAAGTGCACTTGATTGTTTCTATTATCTGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATATTTCAGAAATGTGAAGTGCACTTGATTGTTTCTATTATCTGAA  732

seq1  AAAAAAAACCTATATATTTCTGCGGACAATTCTGATTTGAAGTGGCACTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCTATATATTTCTGCGGACAATTCTGATTTGAAGTGGCACTC  782

seq1  TTGCTGAACTGTTCTTAGAAACACAGTGCAATTATGCAGCCTTACATTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAACTGTTCTTAGAAACACAGTGCAATTATGCAGCCTTACATTTT  832

seq1  CTAATGTTCTCTGAAGGATTCAGCTGCCCTGTTCTCTAAATTTGTTTGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTCTCTGAAGGATTCAGCTGCCCTGTTCTCTAAATTTGTTTGTT  882

seq1  GAAACTCAAGCCCAAAGAAGGAGACACTCAGGTGAAGTCTTTGAATTTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCAAGCCCAAAGAAGGAGACACTCAGGTGAAGTCTTTGAATTTGG  932

seq1  AGCATTCCTCCTTGTAATTAGTCTCTTAAGGAAAATATAACTGGGGAGGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCCTCCTTGTAATTAGTCTCTTAAGGAAAATATAACTGGGGAGGG  982

seq1  GGGGGATCTTGTATGCCTTTATTTACCAGAGAATGTGTTGGGTAGGTGCG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGATCTTGTATGCCTTTATTTACCAGAGAATGTGTTGGGTAGGTGCG  1032

seq1  ATATACAAACCCAAAAAGTGAATCCTTATCAGACAGTGCACTTCCTCCTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAACCCAAAAAGTGAATCCTTATCAGACAGTGCACTTCCTCCTA  1082

seq1  AATTGTGGAATTC  1112
      |||||||||||||
seq2  AATTGTGGAATTC  1095