BAC Information

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BAC

Clone NameB6Ng01-157D13
Chromosome14 (Build37)
Map Location 23,635,518 - 23,636,646
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneVdac2, Comtd1, Zfp503, EG665075, EG435392, LOC665068
Downstream geneKcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157D13.bB6Ng01-157D13.g
ACCDH951518DH951519
length1,2141,113
definitionDH951518|Mus musculus domesticus DNA, BAC clone: B6Ng01-157D13, 5' end.DH951519|Mus musculus domesticus DNA, BAC clone: B6Ng01-157D13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcaaaggccagcttgctgcttggcctcttggcagtcgg
cttcaaggtcatagtgcacctccaccctatgctgagcccccgccctgcgt
agtgcatcagccctgcgcagagaggcaatggacagagaggcaatgcacag
actcgttcattccaaaggaggaacaaaggaaaatacaacaggcatttccg
gtctttgaaggagccgagggtgggcgtgtccacgctccggtagcgtatat
acagattaaagagcttgccgagtcggtccgtaactatggagtcagtgcta
atttcactatagcacaagtggaaaggcttgcgaatcacgctatgactcct
ggtgattggcagacggtagtaaaagctgtagcccccagtatgggaatgta
tcttgagtggaaagccttgtggcaggactcctgccagacgcaggcaaggg
ccaatgccaccatgaaaggggatcagagaacgtggacttttgaattactt
acaggtcagggacaacacgctgctaaccagacaaattatcattggggagc
atatgctcagatctcagctgctgctgttaaggcatggaaagcactaccta
agaagggagaggcaagtgggcagttgaccaagattactcaaggtgctcag
gaatccttctcagattttgtggccagaatgacagaggcagcagagcgtat
ttttggagattcagagcaagctgcgcctctgataaaacagctatctatga
gcaagccacaaaggagtgccgagcagccatagccccaagaagaacaaagg
cttacagactggctcaggtctgtcgagagcttggggacctctcacatgca
ggcttagcggcgcatctccatctcagaccgctcatgagcagaatatcaga
ggacatgtttactgcagagctgggcatttaagaagatgcaagctcggata
acaggaggacctcactctttgctctagtgtgcagggtatcatgagcctga
caggtcgcttgtaggattagggcggatcttcctcactgtatgtcatacct
tagtgtcaaacgacgtcctgtctaagccctagaatgacgttgtcgactcg
aagatctgatggga
gaattcagtgtgtctagctcaacagccagcacctttacccactgagctga
gtcaccaccacccacggtgataagtcttttcacatagaactcactctgta
gctaagactagccttgaacttttaacaacccccttccaaaactttaccaa
agttgggtttgtaagcaggagccactatacccagccacattcacatttaa
atggaacctttaagattttccttcctcatataaagattgggttaacaatt
tcaggttggcctggcaagacagctcagtgtggagagcacttgctactctt
gaaaaggctcctgcttcatttccagagcctctgtctggtagcctacaact
acccgtaatttcagctttgagaaatgcagtgtcctctttttctctctgtg
tgcacagacatggcatacattcacacacacacacacacacacacacacac
acacacacacaatatttaaaaatagactaagaggccattaagattgtcct
tatctgtttagatttctgtttcatattgataactttctgtgcatttgaaa
gtttgaattatctcatttaaaaagcttcccagagactcaagagatgggtc
aggggttaagggcacttattgccactgcagaggacctgggttcagttacc
agcacccacctggctgctctcagccacatgttaactccaattccatggaa
tcggatgcactctcttggactccataggctcctactcatacatggtgtac
ataaacccataaaggctcacacacacatatacaaatacataaaaacataa
gtatttaaaaataaatacattaaaaagttcctaaccataataactttgaa
cctccaagaatgaagtctgaaatataaatatgtttaatgaattgataata
atttttttctcctctatatcatgttacttcattctaatttactaccaaac
ttatatttgcaaagagctttgaataccacattatttcatacagtgcagca
ggttgtctcattaagcttgcagagatcagctccgtggggatctcagaaat
attcttgcatcgatcctcataaatggctctttctaaattgtctccaatat
cattgacataaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23635518_23636646
seq2: B6Ng01-157D13.g_68_1180

seq1  GAATTCAGTGTGTCTAGCTCAACAGCCAGCACCTTTACCCACTGAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTGTCTAGCTCAACAGCCAGCACCTTTACCCACTGAGCTGA  50

seq1  GTCACCACCACCCACGGTGATAAGTCTTTTCACATAGAACTCACTCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACCACCCACGGTGATAAGTCTTTTCACATAGAACTCACTCTGTA  100

seq1  GCTAAGACTAGCCTTGAACTTTTAACAACCCCCTTCCAAAACTTTACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGACTAGCCTTGAACTTTTAACAACCCCCTTCCAAAACTTTACCAA  150

seq1  AGTTGGGTTTGTAAGCAGGAGCCACTATACCCAGCCACATTCACATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGTTTGTAAGCAGGAGCCACTATACCCAGCCACATTCACATTTAA  200

seq1  ATGGAACCTTTAAGATTTTCCTTCCTCATATAAAGATTGGGTTAACAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACCTTTAAGATTTTCCTTCCTCATATAAAGATTGGGTTAACAATT  250

seq1  TCAGGTTGGCCTGGCAAGACAGCTCAGTGTGGAGAGCACTTGCTACTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTGGCCTGGCAAGACAGCTCAGTGTGGAGAGCACTTGCTACTCTT  300

seq1  GAAAAGGCTCCTGCTTCATTTCCAGAGCCTCTGTCTGGTAGCCTACAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCTCCTGCTTCATTTCCAGAGCCTCTGTCTGGTAGCCTACAACT  350

seq1  ACCCGTAATTTCAGCTTTGAGAAATGCAGTGTCCTCTTTTTCTCTCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTAATTTCAGCTTTGAGAAATGCAGTGTCCTCTTTTTCTCTCTGTG  400

seq1  TGCACAGACATGGCATACATTCACACACACACACACACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGACATGGCATACATTCACACACACACACACACACACACACACAC  450

seq1  ACACACACACAATATTTAAAAATAGACTAAGAGGCCATTAAGATTGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACAATATTTAAAAATAGACTAAGAGGCCATTAAGATTGTCCT  500

seq1  TATCTGTTTAGATTTCTGTTTCATATTGATAACTTTCTGTGCATTTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTTTAGATTTCTGTTTCATATTGATAACTTTCTGTGCATTTGAAA  550

seq1  GTTTGAATTATCTCATTTAAAAAGCTTCCCAGAGACTCAAGAGATGGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAATTATCTCATTTAAAAAGCTTCCCAGAGACTCAAGAGATGGGTC  600

seq1  AGGGGTTAAGGGCACTTATTGCCACTGCAGAGGACCTGGGTTCAGTTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTAAGGGCACTTATTGCCACTGCAGAGGACCTGGGTTCAGTTACC  650

seq1  AGCACCCACCTGGCTGCTCTCAGCCACATGTTAACTCCAATTCCATGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCACCTGGCTGCTCTCAGCCACATGTTAACTCCAATTCCATGGAA  700

seq1  TCGGATGCACTCTCTTGGACTCCATAGGCTCCTACTCATACATGGTGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGCACTCTCTTGGACTCCATAGGCTCCTACTCATACATGGTGTAC  750

seq1  ATAAACCCATAAAGGCTCACACACACATATACAAATACATAAAAACATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCCATAAAGGCTCACACACACATATACAAATACATAAAAACATAA  800

seq1  GTATTTAAAAATAAATACATTAAAAAGTTCCTAACCATAATAACTTTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAAAATAAATACATTAAAAAGTTCCTAACCATAATAACTTTGAA  850

seq1  CCTCCAAAGAATGAAGTCTGAAATATAAATATGTTTAAATGAAATTGATA  900
      ||||| |||||||||||||||||||||||||||||| |||| ||||||||
seq2  CCTCC-AAGAATGAAGTCTGAAATATAAATATGTTT-AATG-AATTGATA  897

seq1  ATAATTTTTTTCTCCTCTAATATCATGTTTACTTCATTCTAATTTACTAC  950
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  ATAATTTTTTTCTCCTCT-ATATCATG-TTACTTCATTCTAATTTACTAC  945

seq1  CAAACTTATATTTTGCAAAAGAGCTTTGAATACACAATTATTTCATACAA  1000
      |||||||||| ||||| ||||||||||||||||   ||||||||||||| 
seq2  CAAACTTATA-TTTGC-AAAGAGCTTTGAATACCACATTATTTCATACA-  992

seq1  GGTGCAGCAGGTTGTCTCATTAAGCTTGCAGAGAATCAGGCCCCGTGTGA  1050
       |||||||||||||||||||||||||||||||| |||| || ||||| | 
seq2  -GTGCAGCAGGTTGTCTCATTAAGCTTGCAGAG-ATCA-GCTCCGTGGGG  1039

seq1  TCCCCAGAAATATTCTTGCATCGATCCCTCATTAAAATGGCTC-TTCTAA  1099
        | ||||||||||||||||||||| ||||||  ||||||||| ||||||
seq2  ATCTCAGAAATATTCTTGCATCGAT-CCTCAT--AAATGGCTCTTTCTAA  1086

seq1  ATTGTCTCCAATTTATCAATAGACATAAAA  1129
      |||||||||||  |||| || |||||||||
seq2  ATTGTCTCCAA--TATC-ATTGACATAAAA  1113